Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:50:21 (558749): wrapper (7.7.26015): starting
07:50:21 (558749): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 07:50:21] Arguments: --nthreads 4
[2025-12-18 07:50:21] Threads: 4
[2025-12-18 07:50:21] Checking for CVMFS
[2025-12-18 07:50:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 07:50:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 07:50:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 07:50:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 07:50:22] 2.9.2.0 2605775 7026 97704 154137 1 57 19630548 36864001 0 130560 0 5625024 99.991 251178 8881 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 07:50:22] CVMFS is ok
[2025-12-18 07:50:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 07:50:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 07:50:22] Further information can be found at the LHC@home message board.
[2025-12-18 07:50:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 07:50:22] Checking for apptainer binary...
[2025-12-18 07:50:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 07:50:22] Running /usr/bin/apptainer --version
[2025-12-18 07:50:22] apptainer version 1.4.1-1.1
[2025-12-18 07:50:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 07:50:22] thA334
[2025-12-18 07:50:22] apptainer works
[2025-12-18 07:50:22] Set ATHENA_PROC_NUMBER=4
[2025-12-18 07:50:22] Set ATHENA_CORE_NUMBER=4
[2025-12-18 07:50:22] Starting ATLAS job with PandaID=6932080889
[2025-12-18 07:50:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 10:31:47]  *** The last 200 lines of the pilot log: ***
[2025-12-18 10:31:47] VERSION_ID="7"
[2025-12-18 10:31:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 10:31:47] ANSI_COLOR="0;31"
[2025-12-18 10:31:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 10:31:47] HOME_URL="https://www.centos.org/"
[2025-12-18 10:31:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 10:31:47] 
[2025-12-18 10:31:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 10:31:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 10:31:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 10:31:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 10:31:47] 
[2025-12-18 10:31:47] 2025-12-18 09:31:06,270 | INFO     | ***************************************
[2025-12-18 10:31:47] 2025-12-18 09:31:06,774 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-18 10:31:47] 2025-12-18 09:31:06,791 | INFO     | sufficient remaining disk space (239900557312 B)
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | INFO     | update_server=False
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | INFO     | aborting loop
[2025-12-18 10:31:47] 2025-12-18 09:31:06,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 10:31:47] 2025-12-18 09:31:06,891 | INFO     | all payload control threads have been joined
[2025-12-18 10:31:47] 2025-12-18 09:31:06,990 | INFO     | all job control threads have been joined
[2025-12-18 10:31:47] 2025-12-18 09:31:07,453 | INFO     | all data control threads have been joined
[2025-12-18 10:31:47] 2025-12-18 09:31:07,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 10:31:47] 2025-12-18 09:31:07,797 | INFO     | [job] retrieve thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:07,798 | INFO     | [job] job monitor thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:07,798 | INFO     | [job] queue monitor thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:07,854 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:07,897 | INFO     | [payload] control thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:07,996 | INFO     | [job] control thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:08,143 | INFO     | [data] copytool_in thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:08,424 | INFO     | [payload] validate_post thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:08,459 | INFO     | [data] control thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:08,998 | INFO     | [payload] failed_post thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:09,140 | INFO     | [job] validate thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:09,186 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:09,251 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:09,641 | INFO     | [data] copytool_out thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:10,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 10:31:47] 2025-12-18 09:31:14,012 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:16,912 | INFO     | job.realtimelogging is not enabled
[2025-12-18 10:31:47] 2025-12-18 09:31:17,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 10:31:47] 2025-12-18 09:31:36,430 | INFO     | PID=562541 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-18 10:31:47] 2025-12-18 09:31:36,431 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 10:31:47] 2025-12-18 09:31:36,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 10:31:47] 2025-12-18 09:31:36,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 10:31:47] 2025-12-18 09:31:41,126 | INFO     | [monitor] cgroup control has ended
[2025-12-18 10:31:47] 2025-12-18 09:31:42,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415291877184)>', '<ExcThread(monitor, started 140414325602048)>']
[2025-12-18 10:31:47] 2025-12-18 09:31:43,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 10:31:47] 2025-12-18 09:31:43,469 | INFO     | [monitor] control thread has ended
[2025-12-18 10:31:47] 2025-12-18 09:31:47,633 | INFO     | all workflow threads have been joined
[2025-12-18 10:31:47] 2025-12-18 09:31:47,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 10:31:47] 2025-12-18 09:31:47,634 | INFO     | traces error code: 0
[2025-12-18 10:31:47] 2025-12-18 09:31:47,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 10:31:47] 2025-12-18 09:31:47,702 [wrapper] ==== pilot stdout END ====
[2025-12-18 10:31:47] 2025-12-18 09:31:47,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 10:31:47] 2025-12-18 09:31:47,710 [wrapper] pilotpid: 562541
[2025-12-18 10:31:47] 2025-12-18 09:31:47,714 [wrapper] Pilot exit status: 0
[2025-12-18 10:31:47] 2025-12-18 09:31:47,725 [wrapper] pandaids: 6932080889
[2025-12-18 10:31:47] 2025-12-18 09:31:47,745 [wrapper] cleanup supervisor_pilot  586858 562542
[2025-12-18 10:31:47] 2025-12-18 09:31:47,749 [wrapper] Test setup, not cleaning
[2025-12-18 10:31:47] 2025-12-18 09:31:47,753 [wrapper] apfmon messages muted
[2025-12-18 10:31:47] 2025-12-18 09:31:47,756 [wrapper] ==== wrapper stdout END ====
[2025-12-18 10:31:47] 2025-12-18 09:31:47,759 [wrapper] ==== wrapper stderr END ====
[2025-12-18 10:31:47]  *** Error codes and diagnostics ***
[2025-12-18 10:31:47]     "exeErrorCode": 0,
[2025-12-18 10:31:47]     "exeErrorDiag": "",
[2025-12-18 10:31:47]     "pilotErrorCode": 0,
[2025-12-18 10:31:47]     "pilotErrorDiag": "",
[2025-12-18 10:31:47]  *** Listing of results directory ***
[2025-12-18 10:31:47] total 727032
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc    579449 Dec 17 06:30 pilot3.tar.gz
[2025-12-18 10:31:47] -rwx------ 1 boinc boinc     36322 Dec 17 06:33 runpilot2-wrapper.sh
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc      5112 Dec 17 06:36 queuedata.json
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc       100 Dec 18 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 10:31:47] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 07:50 run_atlas
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc       105 Dec 18 07:50 job.xml
[2025-12-18 10:31:47] -rw-r--r-- 2 boinc boinc 356065248 Dec 18 07:50 EVNT.47928979._000001.pool.root.1
[2025-12-18 10:31:47] -rw-r--r-- 2 boinc boinc    592400 Dec 18 07:50 input.tar.gz
[2025-12-18 10:31:47] -rw-r--r-- 2 boinc boinc     15847 Dec 18 07:50 start_atlas.sh
[2025-12-18 10:31:47] drwxrwx--x 2 boinc boinc      4096 Dec 18 07:50 shared
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc         0 Dec 18 07:50 boinc_setup_complete
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc      6368 Dec 18 07:50 init_data.xml
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc         0 Dec 18 07:50 boinc_lockfile
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc      2574 Dec 18 07:50 pandaJob.out
[2025-12-18 10:31:47] -rw------- 1 boinc boinc    988110 Dec 18 07:50 agis_schedconf.cvmfs.json
[2025-12-18 10:31:47] -rw------- 1 boinc boinc   1516240 Dec 18 07:50 agis_ddmendpoints.agis.ALL.json
[2025-12-18 10:31:47] drwx------ 5 boinc boinc      4096 Dec 18 07:50 pilot3
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc       530 Dec 18 10:30 boinc_task_state.xml
[2025-12-18 10:31:47] -rw------- 1 boinc boinc 381094394 Dec 18 10:30 HITS.47928981._000013.pool.root.1
[2025-12-18 10:31:47] -rw------- 1 boinc boinc      1017 Dec 18 10:30 memory_monitor_summary.json
[2025-12-18 10:31:47] -rw------- 1 boinc boinc    338363 Dec 18 10:30 log.47928981._000013.job.log.tgz.1
[2025-12-18 10:31:47] -rw------- 1 boinc boinc      7740 Dec 18 10:31 heartbeat.json
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc      8192 Dec 18 10:31 boinc_mmap_file
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc        27 Dec 18 10:31 wrapper_checkpoint.txt
[2025-12-18 10:31:47] -rw------- 1 boinc boinc        95 Dec 18 10:31 pilot_heartbeat.json
[2025-12-18 10:31:47] -rw------- 1 boinc boinc      4823 Dec 18 10:31 pilotlog.txt
[2025-12-18 10:31:47] -rw------- 1 boinc boinc   1369677 Dec 18 10:31 log.47928981._000013.job.log.1
[2025-12-18 10:31:47] -rw------- 1 boinc boinc       357 Dec 18 10:31 output.list
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc       620 Dec 18 10:31 runtime_log
[2025-12-18 10:31:47] -rw------- 1 boinc boinc   1730560 Dec 18 10:31 result.tar.gz
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc      8897 Dec 18 10:31 runtime_log.err
[2025-12-18 10:31:47] -rw------- 1 boinc boinc       660 Dec 18 10:31 S8OLDmZLzp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmz7WKDmSte1ym.diag
[2025-12-18 10:31:47] -rw-r--r-- 1 boinc boinc      8636 Dec 18 10:31 stderr.txt
[2025-12-18 10:31:47] HITS file was successfully produced:
[2025-12-18 10:31:47] -rw------- 1 boinc boinc 381094394 Dec 18 10:30 shared/HITS.pool.root.1
[2025-12-18 10:31:47]  *** Contents of shared directory: ***
[2025-12-18 10:31:47] total 722180
[2025-12-18 10:31:47] -rw-r--r-- 2 boinc boinc 356065248 Dec 18 07:50 ATLAS.root_0
[2025-12-18 10:31:47] -rw-r--r-- 2 boinc boinc    592400 Dec 18 07:50 input.tar.gz
[2025-12-18 10:31:47] -rw-r--r-- 2 boinc boinc     15847 Dec 18 07:50 start_atlas.sh
[2025-12-18 10:31:47] -rw------- 1 boinc boinc 381094394 Dec 18 10:30 HITS.pool.root.1
[2025-12-18 10:31:47] -rw------- 1 boinc boinc   1730560 Dec 18 10:31 result.tar.gz
10:31:49 (558749): run_atlas exited; CPU time 37371.446435
10:31:49 (558749): called boinc_finish(0)

</stderr_txt>
]]>

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