Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:00 (26642): wrapper (7.7.26015): starting
00:29:00 (26642): wrapper: running run_atlas (--nthreads 8)
[2025-12-18 00:29:00] Arguments: --nthreads 8
[2025-12-18 00:29:00] Threads: 8
[2025-12-18 00:29:00] Checking for CVMFS
[2025-12-18 00:29:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 00:29:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 00:29:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 00:29:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 00:29:02] 2.11.2.0 2518 2955 73940 154127 0 264 14978724 25165825 3881 130560 0 1765240 99.740 1237424 2174 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-18 00:29:02] CVMFS is ok
[2025-12-18 00:29:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 00:29:02] Checking for apptainer binary...
[2025-12-18 00:29:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 00:29:02] Running /usr/bin/apptainer --version
[2025-12-18 00:29:02] apptainer version 1.3.2-1.el7
[2025-12-18 00:29:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 00:29:21] cg-vwn419.simple-grid.lan
[2025-12-18 00:29:21] apptainer works
[2025-12-18 00:29:21] Set ATHENA_PROC_NUMBER=8
[2025-12-18 00:29:21] Set ATHENA_CORE_NUMBER=8
[2025-12-18 00:29:21] Starting ATLAS job with PandaID=6932081741
[2025-12-18 00:29:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 05:31:37]  *** The last 200 lines of the pilot log: ***
[2025-12-18 05:31:37] 2025-12-18 04:30:59,109 | INFO     | monitor loop #1273: job 0:6932081741 is in state 'finished'
[2025-12-18 05:31:37] 2025-12-18 04:30:59,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 05:31:37] 2025-12-18 04:30:59,273 | INFO     | time since job start (17883s) is within the limit (174528.0s)
[2025-12-18 05:31:37] 2025-12-18 04:31:01,281 | INFO     | time since job start (17885s) is within the limit (174528.0s)
[2025-12-18 05:31:37] 2025-12-18 04:31:01,614 | INFO     | monitor loop #1274: job 0:6932081741 is in state 'finished'
[2025-12-18 05:31:37] 2025-12-18 04:31:01,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,465 | INFO     | PID=30450 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 05:31:37] 2025-12-18 04:31:02,466 | INFO     | .. there are 9 such processes running
[2025-12-18 05:31:37] 2025-12-18 04:31:02,475 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 05:31:37] 2025-12-18 04:31:02,476 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-18 05:31:37] 2025-12-18 04:31:02,478 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6932081741/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,479 | INFO     | extracted standard info from prmon json
[2025-12-18 05:31:37] 2025-12-18 04:31:02,479 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 05:31:37] 2025-12-18 04:31:02,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 05:31:37] 2025-12-18 04:31:02,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 05:31:37] 2025-12-18 04:31:02,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 05:31:37] 2025-12-18 04:31:02,487 | INFO     | fitting pss+swap vs Time
[2025-12-18 05:31:37] 2025-12-18 04:31:02,488 | INFO     | sum of square deviations: 7178069470.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,491 | INFO     | sum of deviations: 38516635067.00001
[2025-12-18 05:31:37] 2025-12-18 04:31:02,491 | INFO     | mean x: 1766023487.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,491 | INFO     | mean y: 2508099.2421052633
[2025-12-18 05:31:37] 2025-12-18 04:31:02,491 | INFO     | intersect: -9473756020.63271
[2025-12-18 05:31:37] 2025-12-18 04:31:02,492 | INFO     | chi2: 4.288772569303884
[2025-12-18 05:31:37] 2025-12-18 04:31:02,492 | INFO     | sum of square deviations: 6806862510.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,495 | INFO     | sum of deviations: 56782396468.49999
[2025-12-18 05:31:37] 2025-12-18 04:31:02,496 | INFO     | mean x: 1766023334.5
[2025-12-18 05:31:37] 2025-12-18 04:31:02,496 | INFO     | mean y: 2515491.5392857143
[2025-12-18 05:31:37] 2025-12-18 04:31:02,496 | INFO     | intersect: -14729534260.439821
[2025-12-18 05:31:37] 2025-12-18 04:31:02,496 | INFO     | chi2: 3.542189497337971
[2025-12-18 05:31:37] 2025-12-18 04:31:02,497 | INFO     | current chi2=3.542189497337971 (change=17.407849446469758 %)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,497 | INFO     | right removable region: 279
[2025-12-18 05:31:37] 2025-12-18 04:31:02,497 | INFO     | sum of square deviations: 6806862510.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,500 | INFO     | sum of deviations: -44892262103.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,501 | INFO     | mean x: 1766023639.5
[2025-12-18 05:31:37] 2025-12-18 04:31:02,501 | INFO     | mean y: 2542282.5785714285
[2025-12-18 05:31:37] 2025-12-18 04:31:02,501 | INFO     | intersect: 11649728631.36351
[2025-12-18 05:31:37] 2025-12-18 04:31:02,501 | INFO     | chi2: 1.0198707561945712
[2025-12-18 05:31:37] 2025-12-18 04:31:02,502 | INFO     | current chi2=1.0198707561945712 (change=76.21998509563991 %)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,502 | INFO     | sum of square deviations: 6448679050.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,505 | INFO     | sum of deviations: -53687067338.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,505 | INFO     | mean x: 1766023792.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,505 | INFO     | mean y: 2545984.9890909093
[2025-12-18 05:31:37] 2025-12-18 04:31:02,506 | INFO     | intersect: 14705190899.782003
[2025-12-18 05:31:37] 2025-12-18 04:31:02,506 | INFO     | chi2: 0.9291535823986299
[2025-12-18 05:31:37] 2025-12-18 04:31:02,506 | INFO     | current chi2=0.9291535823986299 (change=8.894967646139106 %)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,506 | INFO     | left removable region: 20
[2025-12-18 05:31:37] 2025-12-18 04:31:02,507 | INFO     | sum of square deviations: 5387301010.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,509 | INFO     | sum of deviations: -18769863418.99998
[2025-12-18 05:31:37] 2025-12-18 04:31:02,510 | INFO     | mean x: 1766023914.0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,510 | INFO     | mean y: 2547041.0888030888
[2025-12-18 05:31:37] 2025-12-18 04:31:02,510 | INFO     | intersect: 6155540460.045315
[2025-12-18 05:31:37] 2025-12-18 04:31:02,511 | INFO     | chi2: 0.10861221769016334
[2025-12-18 05:31:37] 2025-12-18 04:31:02,511 | INFO     | current memory leak: -3.48 B/s (using 259 data points, chi2=0.11)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | ..............................
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | . Timing measurements:
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | . get job = 0 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | . initial setup = 10 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | . payload setup = 108 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,512 | INFO     | . stage-in = 0 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,513 | INFO     | . payload execution = 17498 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,513 | INFO     | . stage-out = 4 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,513 | INFO     | . log creation = 0 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,513 | INFO     | ..............................
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | 
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | job summary report
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | --------------------------------------------------
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | PanDA job id: 6932081741
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | task id: 47929064
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | errors: (none)
[2025-12-18 05:31:37] 2025-12-18 04:31:02,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | pilot state: finished 
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | transexitcode: 0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | exeerrorcode: 0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | exeerrordiag: 
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | exitcode: 0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | exitmsg: OK
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | cpuconsumptiontime: 64082 s
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | nevents: 400
[2025-12-18 05:31:37] 2025-12-18 04:31:02,656 | INFO     | neventsw: 0
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | pid: 4666
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | pgrp: 4666
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | corecount: 8
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | event service: False
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | sizes: {0: 2283897, 1: 2284096, 12: 2284096, 23: 2284124, 33: 2284152, 44: 2284208, 55: 2284364, 66: 2284392, 76: 2284420, 87: 2284766, 17611: 2316412, 17616: 2325
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | --------------------------------------------------
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | 
[2025-12-18 05:31:37] 2025-12-18 04:31:02,657 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-12-18 05:31:37] 2025-12-18 04:31:03,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,119 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 05:31:37] 2025-12-18 04:31:03,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,119 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 05:31:37] 2025-12-18 04:31:03,119 | INFO     | job 6932081741 has completed (purged errors)
[2025-12-18 05:31:37] 2025-12-18 04:31:03,119 | INFO     | overall cleanup function is called
[2025-12-18 05:31:37] 2025-12-18 04:31:04,129 | INFO     | --- collectZombieJob: --- 10, [4666]
[2025-12-18 05:31:37] 2025-12-18 04:31:04,129 | INFO     | zombie collector waiting for pid 4666
[2025-12-18 05:31:37] 2025-12-18 04:31:04,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 05:31:37] 2025-12-18 04:31:04,129 | INFO     | collected zombie processes
[2025-12-18 05:31:37] 2025-12-18 04:31:04,129 | INFO     | will attempt to kill all subprocesses of pid=4666
[2025-12-18 05:31:37] 2025-12-18 04:31:04,291 | INFO     | process IDs to be killed: [4666] (in reverse order)
[2025-12-18 05:31:37] 2025-12-18 04:31:04,978 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 05:31:37] 2025-12-18 04:31:04,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 05:31:37] 2025-12-18 04:31:04,982 | INFO     | did not find any defunct processes belonging to 4666
[2025-12-18 05:31:37] 2025-12-18 04:31:04,992 | INFO     | did not find any defunct processes belonging to 4666
[2025-12-18 05:31:37] 2025-12-18 04:31:04,992 | INFO     | ready for new job
[2025-12-18 05:31:37] 2025-12-18 04:31:04,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 05:31:37] 2025-12-18 04:31:04,995 | INFO     | ***************************************
[2025-12-18 05:31:37] 2025-12-18 04:31:04,995 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 05:31:37] 2025-12-18 04:31:04,995 | INFO     | ***************************************
[2025-12-18 05:31:37] 2025-12-18 04:31:04,995 | INFO     | 
[2025-12-18 05:31:37] 2025-12-18 04:31:05,001 | INFO     | pilot is running in a VM
[2025-12-18 05:31:37] 2025-12-18 04:31:05,022 | INFO     | architecture information:
[2025-12-18 05:31:37] 2025-12-18 04:31:05,028 | INFO     | executing command: cat /etc/os-release
[2025-12-18 05:31:37] 2025-12-18 04:31:05,225 | INFO     | cat /etc/os-release:
[2025-12-18 05:31:37] NAME="CentOS Linux"
[2025-12-18 05:31:37] VERSION="7 (Core)"
[2025-12-18 05:31:37] ID="centos"
[2025-12-18 05:31:37] ID_LIKE="rhel fedora"
[2025-12-18 05:31:37] VERSION_ID="7"
[2025-12-18 05:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 05:31:37] ANSI_COLOR="0;31"
[2025-12-18 05:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 05:31:37] HOME_URL="https://www.centos.org/"
[2025-12-18 05:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 05:31:37] 
[2025-12-18 05:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 05:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 05:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 05:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 05:31:37] 
[2025-12-18 05:31:37] 2025-12-18 04:31:05,225 | INFO     | ***************************************
[2025-12-18 05:31:37] 2025-12-18 04:31:05,736 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-12-18 05:31:37] 2025-12-18 04:31:05,882 | INFO     | sufficient remaining disk space (496262709248 B)
[2025-12-18 05:31:37] 2025-12-18 04:31:05,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 05:31:37] 2025-12-18 04:31:05,883 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 05:31:37] 2025-12-18 04:31:05,883 | INFO     | update_server=False
[2025-12-18 05:31:37] 2025-12-18 04:31:05,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 05:31:37] 2025-12-18 04:31:05,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 05:31:37] 2025-12-18 04:31:05,884 | INFO     | aborting loop
[2025-12-18 05:31:37] 2025-12-18 04:31:05,931 | INFO     | all data control threads have been joined
[2025-12-18 05:31:37] 2025-12-18 04:31:06,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 05:31:37] 2025-12-18 04:31:06,889 | INFO     | [job] retrieve thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:06,890 | INFO     | [job] job monitor thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:06,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:06,917 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:06,937 | INFO     | [data] control thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:07,231 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:07,257 | INFO     | all payload control threads have been joined
[2025-12-18 05:31:37] 2025-12-18 04:31:07,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 05:31:37] 2025-12-18 04:31:07,357 | INFO     | all job control threads have been joined
[2025-12-18 05:31:37] 2025-12-18 04:31:07,577 | INFO     | [job] validate thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:07,634 | INFO     | [payload] validate_post thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:07,637 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:07,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 05:31:37] 2025-12-18 04:31:07,900 | INFO     | [data] copytool_in thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:07,994 | INFO     | [payload] failed_post thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:08,263 | INFO     | [payload] control thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:08,363 | INFO     | [job] control thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:08,680 | INFO     | [job] queue monitor thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:09,324 | INFO     | [data] copytool_out thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:10,602 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 05:31:37] 2025-12-18 04:31:26,543 | INFO     | [monitor] cgroup control has ended
[2025-12-18 05:31:37] 2025-12-18 04:31:27,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140028948956992)>', '<ExcThread(monitor, started 140028046980864)>']
[2025-12-18 05:31:37] 2025-12-18 04:31:32,520 | INFO     | all workflow threads have been joined
[2025-12-18 05:31:37] 2025-12-18 04:31:32,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 05:31:37] 2025-12-18 04:31:32,520 | INFO     | traces error code: 0
[2025-12-18 05:31:37] 2025-12-18 04:31:32,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 05:31:37] 2025-12-18 04:31:34,683 | INFO     | PID=30450 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-18 05:31:37] 2025-12-18 04:31:34,683 | INFO     | .. there are 9 such processes running
[2025-12-18 05:31:37] 2025-12-18 04:31:34,683 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 05:31:37] 2025-12-18 04:31:34,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 05:31:37] 2025-12-18 04:31:34,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 05:31:37] 2025-12-18 04:31:34,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 05:31:37] 2025-12-18 04:31:34,684 | INFO     | [monitor] control thread has ended
[2025-12-18 05:31:37] 2025-12-18 04:31:34,998 [wrapper] ==== pilot stdout END ====
[2025-12-18 05:31:37] 2025-12-18 04:31:35,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 05:31:37] 2025-12-18 04:31:35,237 [wrapper] pilotpid: 30450
[2025-12-18 05:31:37] 2025-12-18 04:31:35,355 [wrapper] Pilot exit status: 0
[2025-12-18 05:31:37] 2025-12-18 04:31:35,792 [wrapper] pandaids: 6932081741
[2025-12-18 05:31:37] 2025-12-18 04:31:36,494 [wrapper] cleanup supervisor_pilot 24573 30451
[2025-12-18 05:31:37] 2025-12-18 04:31:36,543 [wrapper] Test setup, not cleaning
[2025-12-18 05:31:37] 2025-12-18 04:31:36,624 [wrapper] apfmon messages muted
[2025-12-18 05:31:37] 2025-12-18 04:31:36,699 [wrapper] ==== wrapper stdout END ====
[2025-12-18 05:31:37] 2025-12-18 04:31:36,772 [wrapper] ==== wrapper stderr END ====
[2025-12-18 05:31:37]  *** Error codes and diagnostics ***
[2025-12-18 05:31:37]     "exeErrorCode": 0,
[2025-12-18 05:31:37]     "exeErrorDiag": "",
[2025-12-18 05:31:37]     "pilotErrorCode": 0,
[2025-12-18 05:31:37]     "pilotErrorDiag": "",
[2025-12-18 05:31:37]  *** Listing of results directory ***
[2025-12-18 05:31:37] total 514396
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc    579449 Dec 17 06:30 pilot3.tar.gz
[2025-12-18 05:31:37] -rwx------. 1 boinc boinc     36322 Dec 17 06:30 runpilot2-wrapper.sh
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc      5112 Dec 17 06:32 queuedata.json
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc       100 Dec 18 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 05:31:37] -rwxr-xr-x. 1 boinc boinc      7986 Dec 18 00:28 run_atlas
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc       105 Dec 18 00:28 job.xml
[2025-12-18 05:31:37] -rw-r--r--. 2 boinc boinc 289893560 Dec 18 00:29 EVNT.47929062._000007.pool.root.1
[2025-12-18 05:31:37] -rw-r--r--. 2 boinc boinc     15847 Dec 18 00:29 start_atlas.sh
[2025-12-18 05:31:37] drwxrwx--x. 2 boinc boinc        68 Dec 18 00:29 shared
[2025-12-18 05:31:37] -rw-r--r--. 2 boinc boinc    592402 Dec 18 00:29 input.tar.gz
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc      6391 Dec 18 00:29 init_data.xml
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc         0 Dec 18 00:29 boinc_lockfile
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc      2587 Dec 18 00:29 pandaJob.out
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc    988134 Dec 18 00:32 agis_schedconf.cvmfs.json
[2025-12-18 05:31:37] drwx------. 5 boinc boinc      4096 Dec 18 00:32 pilot3
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc 227150652 Dec 18 05:28 HITS.47929064._000175.pool.root.1
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc       531 Dec 18 05:28 boinc_task_state.xml
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc      1018 Dec 18 05:29 memory_monitor_summary.json
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc   1516240 Dec 18 05:29 agis_ddmendpoints.agis.ALL.json
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc    518270 Dec 18 05:29 log.47929064._000175.job.log.tgz.1
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc        95 Dec 18 05:31 pilot_heartbeat.json
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc      7771 Dec 18 05:31 heartbeat.json
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc      8192 Dec 18 05:31 boinc_mmap_file
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc        28 Dec 18 05:31 wrapper_checkpoint.txt
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc       820 Dec 18 05:31 pilotlog.txt
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc   2385752 Dec 18 05:31 log.47929064._000175.job.log.1
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc       357 Dec 18 05:31 output.list
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc       620 Dec 18 05:31 runtime_log
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc   2918400 Dec 18 05:31 result.tar.gz
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc      8833 Dec 18 05:31 runtime_log.err
[2025-12-18 05:31:37] -rw-------. 1 boinc boinc       656 Dec 18 05:31 pKyMDmpIzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSTbKDmUe4C6m.diag
[2025-12-18 05:31:37] -rw-r--r--. 1 boinc boinc     21072 Dec 18 05:31 stderr.txt
[2025-12-18 05:31:38] HITS file was successfully produced:
[2025-12-18 05:31:38] -rw-------. 1 boinc boinc 227150652 Dec 18 05:28 shared/HITS.pool.root.1
[2025-12-18 05:31:38]  *** Contents of shared directory: ***
[2025-12-18 05:31:38] total 508376
[2025-12-18 05:31:38] -rw-r--r--. 2 boinc boinc 289893560 Dec 18 00:29 ATLAS.root_0
[2025-12-18 05:31:38] -rw-r--r--. 2 boinc boinc     15847 Dec 18 00:29 start_atlas.sh
[2025-12-18 05:31:38] -rw-r--r--. 2 boinc boinc    592402 Dec 18 00:29 input.tar.gz
[2025-12-18 05:31:38] -rw-------. 1 boinc boinc 227150652 Dec 18 05:28 HITS.pool.root.1
[2025-12-18 05:31:38] -rw-------. 1 boinc boinc   2918400 Dec 18 05:31 result.tar.gz
05:31:39 (26642): run_atlas exited; CPU time 64327.738561
05:31:39 (26642): called boinc_finish(0)

</stderr_txt>
]]>

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