Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:01:05 (283950): wrapper (7.7.26015): starting
14:01:05 (283950): wrapper: running run_atlas (--nthreads 9)
[2025-12-17 14:01:05] Arguments: --nthreads 9
[2025-12-17 14:01:05] Threads: 9
[2025-12-17 14:01:05] Checking for CVMFS
[2025-12-17 14:01:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 14:01:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 14:01:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 14:01:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 14:01:27] 2.13.3.0 5210 21344 325536 154119 0 636 20809881 32935937 21191 16776704 0 52134884 99.309 91970482 32290 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 14:01:27] CVMFS is ok
[2025-12-17 14:01:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 14:01:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 14:01:27] Further information can be found at the LHC@home message board.
[2025-12-17 14:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 14:01:27] Checking for apptainer binary...
[2025-12-17 14:01:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 14:01:27] Running /usr/bin/apptainer --version
[2025-12-17 14:01:27] apptainer version 1.4.5-2.el9
[2025-12-17 14:01:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 14:01:28] c6-1-26-2.aglt2.org
[2025-12-17 14:01:28] apptainer works
[2025-12-17 14:01:28] Set ATHENA_PROC_NUMBER=9
[2025-12-17 14:01:28] Set ATHENA_CORE_NUMBER=9
[2025-12-17 14:01:28] Starting ATLAS job with PandaID=6932080988
[2025-12-17 14:01:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 19:35:24]  *** The last 200 lines of the pilot log: ***
[2025-12-17 19:35:24] 2025-12-18 00:34:43,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:35:24] 2025-12-18 00:34:43,984 | INFO     | time since job start (19883s) is within the limit (174528.0s)
[2025-12-17 19:35:24] 2025-12-18 00:34:45,991 | INFO     | time since job start (19885s) is within the limit (174528.0s)
[2025-12-17 19:35:24] 2025-12-18 00:34:46,214 | INFO     | monitor loop #1169: job 0:6932080988 is in state 'finished'
[2025-12-17 19:35:24] 2025-12-18 00:34:46,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:35:24] 2025-12-18 00:34:47,998 | INFO     | time since job start (19887s) is within the limit (174528.0s)
[2025-12-17 19:35:24] 2025-12-18 00:34:48,718 | INFO     | monitor loop #1170: job 0:6932080988 is in state 'finished'
[2025-12-17 19:35:24] 2025-12-18 00:34:48,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,020 | INFO     | time since job start (19890s) is within the limit (174528.0s)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,367 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 19:35:24] 2025-12-18 00:34:50,388 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2747.202017857144
[2025-12-17 19:35:24] 2025-12-18 00:34:50,418 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6932080988/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,419 | INFO     | extracted standard info from prmon json
[2025-12-17 19:35:24] 2025-12-18 00:34:50,419 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 19:35:24] 2025-12-18 00:34:50,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 19:35:24] 2025-12-18 00:34:50,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 19:35:24] 2025-12-18 00:34:50,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 19:35:24] 2025-12-18 00:34:50,425 | INFO     | fitting pss+swap vs Time
[2025-12-17 19:35:24] 2025-12-18 00:34:50,426 | INFO     | sum of square deviations: 10450051576.161064
[2025-12-17 19:35:24] 2025-12-18 00:34:50,428 | INFO     | sum of deviations: 97630121446.5449
[2025-12-17 19:35:24] 2025-12-18 00:34:50,428 | INFO     | mean x: 1766008187.619195
[2025-12-17 19:35:24] 2025-12-18 00:34:50,428 | INFO     | mean y: 2394032.5572755416
[2025-12-17 19:35:24] 2025-12-18 00:34:50,428 | INFO     | intersect: -16496624424.554813
[2025-12-17 19:35:24] 2025-12-18 00:34:50,429 | INFO     | chi2: 3.7230007895944683
[2025-12-17 19:35:24] 2025-12-18 00:34:50,429 | INFO     | sum of square deviations: 9972287710.217072
[2025-12-17 19:35:24] 2025-12-18 00:34:50,431 | INFO     | sum of deviations: 118624802065.00943
[2025-12-17 19:35:24] 2025-12-18 00:34:50,431 | INFO     | mean x: 1766008035.1226416
[2025-12-17 19:35:24] 2025-12-18 00:34:50,431 | INFO     | mean y: 2400656.179245283
[2025-12-17 19:35:24] 2025-12-18 00:34:50,431 | INFO     | intersect: -21005051164.22952
[2025-12-17 19:35:24] 2025-12-18 00:34:50,432 | INFO     | chi2: 3.0253071662551054
[2025-12-17 19:35:24] 2025-12-18 00:34:50,432 | INFO     | current chi2=3.0253071662551054 (change=18.740087976595888 %)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,432 | INFO     | right removable region: 317
[2025-12-17 19:35:24] 2025-12-18 00:34:50,432 | INFO     | sum of square deviations: 9972224574.968557
[2025-12-17 19:35:24] 2025-12-18 00:34:50,434 | INFO     | sum of deviations: 16632527553.886795
[2025-12-17 19:35:24] 2025-12-18 00:34:50,434 | INFO     | mean x: 1766008340.125786
[2025-12-17 19:35:24] 2025-12-18 00:34:50,435 | INFO     | mean y: 2419826.452830189
[2025-12-17 19:35:24] 2025-12-18 00:34:50,435 | INFO     | intersect: -2943079661.321053
[2025-12-17 19:35:24] 2025-12-18 00:34:50,435 | INFO     | chi2: 1.1344670647805228
[2025-12-17 19:35:24] 2025-12-18 00:34:50,435 | INFO     | current chi2=1.1344670647805228 (change=69.52815406455781 %)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,436 | INFO     | sum of square deviations: 9509188670.747606
[2025-12-17 19:35:24] 2025-12-18 00:34:50,438 | INFO     | sum of deviations: -476367872.82748413
[2025-12-17 19:35:24] 2025-12-18 00:34:50,438 | INFO     | mean x: 1766008492.632588
[2025-12-17 19:35:24] 2025-12-18 00:34:50,438 | INFO     | mean y: 2425443.4536741213
[2025-12-17 19:35:24] 2025-12-18 00:34:50,438 | INFO     | intersect: 90894579.79740779
[2025-12-17 19:35:24] 2025-12-18 00:34:50,438 | INFO     | chi2: 1.0170321710747952
[2025-12-17 19:35:24] 2025-12-18 00:34:50,438 | INFO     | current chi2=1.0170321710747952 (change=10.351547202337422 %)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,439 | INFO     | left removable region: 20
[2025-12-17 19:35:24] 2025-12-18 00:34:50,439 | INFO     | sum of square deviations: 8124300908.168362
[2025-12-17 19:35:24] 2025-12-18 00:34:50,441 | INFO     | sum of deviations: -10409643558.32996
[2025-12-17 19:35:24] 2025-12-18 00:34:50,441 | INFO     | mean x: 1766008614.6430976
[2025-12-17 19:35:24] 2025-12-18 00:34:50,441 | INFO     | mean y: 2444318.6195286196
[2025-12-17 19:35:24] 2025-12-18 00:34:50,441 | INFO     | intersect: 2265226114.5143013
[2025-12-17 19:35:24] 2025-12-18 00:34:50,441 | INFO     | chi2: 0.04188638845202092
[2025-12-17 19:35:24] 2025-12-18 00:34:50,442 | INFO     | current memory leak: -1.28 B/s (using 297 data points, chi2=0.04)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,442 | INFO     | could have reported an average CPU frequency of 2788 MHz (14 samples)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,442 | INFO     | ..............................
[2025-12-17 19:35:24] 2025-12-18 00:34:50,442 | INFO     | . Timing measurements:
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . get job = 0 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . initial setup = 12 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . payload setup = 49 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . stage-in = 0 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . payload execution = 19717 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . stage-out = 4 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | . log creation = 0 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,443 | INFO     | ..............................
[2025-12-17 19:35:24] 2025-12-18 00:34:50,753 | INFO     | 
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | job summary report
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | --------------------------------------------------
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | PanDA job id: 6932080988
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | task id: 47929064
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | errors: (none)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | pilot state: finished 
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | transexitcode: 0
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | exeerrorcode: 0
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | exeerrordiag: 
[2025-12-17 19:35:24] 2025-12-18 00:34:50,754 | INFO     | exitcode: 0
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | exitmsg: OK
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | cpuconsumptiontime: 48093 s
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | nevents: 400
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | neventsw: 0
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | pid: 306737
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | pgrp: 306737
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | corecount: 9
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | event service: False
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | sizes: {0: 2283892, 1: 2284091, 12: 2284091, 23: 2284119, 34: 2275076, 35: 2284437, 45: 2284593, 19772: 2317651, 19779: 2326705, 19811: 2326843}
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | --------------------------------------------------
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | 
[2025-12-17 19:35:24] 2025-12-18 00:34:50,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-17 19:35:24] 2025-12-18 00:34:50,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,895 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 19:35:24] 2025-12-18 00:34:50,898 | INFO     | job 6932080988 has completed (purged errors)
[2025-12-17 19:35:24] 2025-12-18 00:34:50,898 | INFO     | overall cleanup function is called
[2025-12-17 19:35:24] 2025-12-18 00:34:51,942 | INFO     | --- collectZombieJob: --- 10, [306737]
[2025-12-17 19:35:24] 2025-12-18 00:34:51,943 | INFO     | zombie collector waiting for pid 306737
[2025-12-17 19:35:24] 2025-12-18 00:34:51,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 19:35:24] 2025-12-18 00:34:51,943 | INFO     | collected zombie processes
[2025-12-17 19:35:24] 2025-12-18 00:34:51,943 | INFO     | will attempt to kill all subprocesses of pid=306737
[2025-12-17 19:35:24] 2025-12-18 00:34:52,768 | INFO     | process IDs to be killed: [306737] (in reverse order)
[2025-12-17 19:35:24] 2025-12-18 00:34:53,148 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 19:35:24] 2025-12-18 00:34:53,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 19:35:24] 2025-12-18 00:34:53,175 | INFO     | did not find any defunct processes belonging to 306737
[2025-12-17 19:35:24] 2025-12-18 00:34:53,205 | INFO     | did not find any defunct processes belonging to 306737
[2025-12-17 19:35:24] 2025-12-18 00:34:53,205 | INFO     | ready for new job
[2025-12-17 19:35:24] 2025-12-18 00:34:53,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 19:35:24] 2025-12-18 00:34:53,208 | INFO     | ***************************************
[2025-12-17 19:35:24] 2025-12-18 00:34:53,208 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 19:35:24] 2025-12-18 00:34:53,208 | INFO     | ***************************************
[2025-12-17 19:35:24] 2025-12-18 00:34:53,213 | INFO     | 
[2025-12-17 19:35:24] 2025-12-18 00:34:53,230 | INFO     | architecture information:
[2025-12-17 19:35:24] 2025-12-18 00:34:53,234 | INFO     | executing command: cat /etc/os-release
[2025-12-17 19:35:24] 2025-12-18 00:34:53,350 | INFO     | cat /etc/os-release:
[2025-12-17 19:35:24] NAME="CentOS Linux"
[2025-12-17 19:35:24] VERSION="7 (Core)"
[2025-12-17 19:35:24] ID="centos"
[2025-12-17 19:35:24] ID_LIKE="rhel fedora"
[2025-12-17 19:35:24] VERSION_ID="7"
[2025-12-17 19:35:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 19:35:24] ANSI_COLOR="0;31"
[2025-12-17 19:35:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 19:35:24] HOME_URL="https://www.centos.org/"
[2025-12-17 19:35:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 19:35:24] 
[2025-12-17 19:35:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 19:35:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 19:35:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 19:35:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 19:35:24] 
[2025-12-17 19:35:24] 2025-12-18 00:34:53,350 | INFO     | ***************************************
[2025-12-17 19:35:24] 2025-12-18 00:34:53,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-17 19:35:24] 2025-12-18 00:34:53,922 | INFO     | sufficient remaining disk space (75335991296 B)
[2025-12-17 19:35:24] 2025-12-18 00:34:53,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 19:35:24] 2025-12-18 00:34:53,923 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 19:35:24] 2025-12-18 00:34:53,923 | INFO     | update_server=False
[2025-12-17 19:35:24] 2025-12-18 00:34:53,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 19:35:24] 2025-12-18 00:34:54,120 | INFO     | all job control threads have been joined
[2025-12-17 19:35:24] 2025-12-18 00:34:54,480 | INFO     | all payload control threads have been joined
[2025-12-17 19:35:24] 2025-12-18 00:34:54,541 | INFO     | all data control threads have been joined
[2025-12-17 19:35:24] 2025-12-18 00:34:54,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 19:35:24] 2025-12-18 00:34:54,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:35:24] 2025-12-18 00:34:54,752 | INFO     | aborting loop
[2025-12-17 19:35:24] 2025-12-18 00:34:54,929 | INFO     | [job] retrieve thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,126 | INFO     | [job] control thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,296 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,346 | INFO     | [payload] failed_post thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,479 | INFO     | [monitor] cgroup control has ended
[2025-12-17 19:35:24] 2025-12-18 00:34:55,487 | INFO     | [payload] control thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,548 | INFO     | [data] control thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:35:24] 2025-12-18 00:34:55,758 | INFO     | [job] job monitor thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,811 | INFO     | [payload] validate_post thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,820 | INFO     | [data] copytool_in thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,820 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:55,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:56,079 | INFO     | [job] validate thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:56,105 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:56,681 | INFO     | [job] queue monitor thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:56,716 | INFO     | [data] copytool_out thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:34:56,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 19:35:24] 2025-12-18 00:35:00,949 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 19:35:24] 2025-12-18 00:35:02,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003484186432)>', '<ExcThread(monitor, started 140002914727680)>']
[2025-12-17 19:35:24] 2025-12-18 00:35:07,900 | INFO     | all workflow threads have been joined
[2025-12-17 19:35:24] 2025-12-18 00:35:07,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 19:35:24] 2025-12-18 00:35:07,901 | INFO     | traces error code: 0
[2025-12-17 19:35:24] 2025-12-18 00:35:07,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 19:35:24] 2025-12-18 00:35:23,584 | INFO     | PID=291664 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 19:35:24] 2025-12-18 00:35:23,585 | INFO     | .. there are 20 such processes running
[2025-12-17 19:35:24] 2025-12-18 00:35:23,586 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 19:35:24] 2025-12-18 00:35:23,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 19:35:24] 2025-12-18 00:35:23,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 19:35:24] 2025-12-18 00:35:23,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 19:35:24] 2025-12-18 00:35:23,586 | INFO     | [monitor] control thread has ended
[2025-12-17 19:35:24] 2025-12-18 00:35:24,047 [wrapper] ==== pilot stdout END ====
[2025-12-17 19:35:24] 2025-12-18 00:35:24,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 19:35:24] 2025-12-18 00:35:24,071 [wrapper] pilotpid: 291664
[2025-12-17 19:35:24] 2025-12-18 00:35:24,079 [wrapper] Pilot exit status: 0
[2025-12-17 19:35:24] 2025-12-18 00:35:24,117 [wrapper] pandaids: 6932080988
[2025-12-17 19:35:24] 2025-12-18 00:35:24,256 [wrapper] cleanup supervisor_pilot 1983208 291665
[2025-12-17 19:35:24] 2025-12-18 00:35:24,260 [wrapper] Test setup, not cleaning
[2025-12-17 19:35:24] 2025-12-18 00:35:24,263 [wrapper] apfmon messages muted
[2025-12-17 19:35:24] 2025-12-18 00:35:24,266 [wrapper] ==== wrapper stdout END ====
[2025-12-17 19:35:24] 2025-12-18 00:35:24,270 [wrapper] ==== wrapper stderr END ====
[2025-12-17 19:35:24]  *** Error codes and diagnostics ***
[2025-12-17 19:35:24]     "exeErrorCode": 0,
[2025-12-17 19:35:24]     "exeErrorDiag": "",
[2025-12-17 19:35:24]     "pilotErrorCode": 0,
[2025-12-17 19:35:24]     "pilotErrorDiag": "",
[2025-12-17 19:35:24]  *** Listing of results directory ***
[2025-12-17 19:35:24] total 519252
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 00:30 pilot3.tar.gz
[2025-12-17 19:35:24] -rwx------. 1 boincer umatlas     36322 Dec 17 00:30 runpilot2-wrapper.sh
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 00:32 queuedata.json
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas       100 Dec 17 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 19:35:24] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 14:01 run_atlas
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas       105 Dec 17 14:01 job.xml
[2025-12-17 19:35:24] -rw-r--r--. 2 boincer umatlas 290214500 Dec 17 14:01 EVNT.47929062._000002.pool.root.1
[2025-12-17 19:35:24] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 14:01 start_atlas.sh
[2025-12-17 19:35:24] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 14:01 shared
[2025-12-17 19:35:24] -rw-r--r--. 2 boincer umatlas    592398 Dec 17 14:01 input.tar.gz
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas         0 Dec 17 14:01 boinc_lockfile
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas      2585 Dec 17 14:01 pandaJob.out
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas        57 Dec 17 14:01 setup.sh.local
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas    988136 Dec 17 14:03 agis_schedconf.cvmfs.json
[2025-12-17 19:35:24] drwx------. 5 boincer umatlas      4096 Dec 17 14:03 pilot3
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas      6844 Dec 17 19:29 init_data.xml
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas 231660977 Dec 17 19:32 HITS.47929064._000033.pool.root.1
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas       531 Dec 17 19:33 boinc_task_state.xml
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas      1056 Dec 17 19:34 memory_monitor_summary.json
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas   1516240 Dec 17 19:34 agis_ddmendpoints.agis.ALL.json
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas    533577 Dec 17 19:34 log.47929064._000033.job.log.tgz.1
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas      7817 Dec 17 19:34 heartbeat.json
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 19:35 boinc_mmap_file
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas        28 Dec 17 19:35 wrapper_checkpoint.txt
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas        95 Dec 17 19:35 pilot_heartbeat.json
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas       822 Dec 17 19:35 pilotlog.txt
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas   2426544 Dec 17 19:35 log.47929064._000033.job.log.1
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas       357 Dec 17 19:35 output.list
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas       620 Dec 17 19:35 runtime_log
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas   2979840 Dec 17 19:35 result.tar.gz
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 19:35 runtime_log.err
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas       658 Dec 17 19:35 3G0MDmoIzp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmR1WKDmPq6J4n.diag
[2025-12-17 19:35:24] -rw-r--r--. 1 boincer umatlas     21431 Dec 17 19:35 stderr.txt
[2025-12-17 19:35:24] HITS file was successfully produced:
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas 231660977 Dec 17 19:32 shared/HITS.pool.root.1
[2025-12-17 19:35:24]  *** Contents of shared directory: ***
[2025-12-17 19:35:24] total 513164
[2025-12-17 19:35:24] -rw-r--r--. 2 boincer umatlas 290214500 Dec 17 14:01 ATLAS.root_0
[2025-12-17 19:35:24] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 14:01 start_atlas.sh
[2025-12-17 19:35:24] -rw-r--r--. 2 boincer umatlas    592398 Dec 17 14:01 input.tar.gz
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas 231660977 Dec 17 19:32 HITS.pool.root.1
[2025-12-17 19:35:24] -rw-------. 1 boincer umatlas   2979840 Dec 17 19:35 result.tar.gz
19:35:26 (283950): run_atlas exited; CPU time 48688.250271
19:35:26 (283950): called boinc_finish(0)

</stderr_txt>
]]>

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