Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:15:45 (1391164): wrapper (7.7.26015): starting
13:15:45 (1391164): wrapper: running run_atlas (--nthreads 11)
[2025-12-17 13:15:45] Arguments: --nthreads 11
[2025-12-17 13:15:45] Threads: 11
[2025-12-17 13:15:45] Checking for CVMFS
[2025-12-17 13:15:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:15:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:15:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:15:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:15:45] 2.13.3.0 14106 60588 170328 154119 3 241 27786169 40960000 40948 16776704 0 820799693 99.723 599241950 47018 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 13:15:45] CVMFS is ok
[2025-12-17 13:15:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:15:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:15:45] Further information can be found at the LHC@home message board.
[2025-12-17 13:15:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:15:45] Checking for apptainer binary...
[2025-12-17 13:15:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 13:15:45] Running /usr/bin/apptainer --version
[2025-12-17 13:16:08] apptainer version 1.4.5-2.el9
[2025-12-17 13:16:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:16:09] c8-7-5.aglt2.org
[2025-12-17 13:16:09] apptainer works
[2025-12-17 13:16:10] Set ATHENA_PROC_NUMBER=11
[2025-12-17 13:16:10] Set ATHENA_CORE_NUMBER=11
[2025-12-17 13:16:10] Starting ATLAS job with PandaID=6932418390
[2025-12-17 13:16:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 14:35:21]  *** The last 200 lines of the pilot log: ***
[2025-12-17 14:35:22] 2025-12-17 19:34:03,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:03,168 | INFO     | time since job start (4618s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:05,178 | INFO     | time since job start (4620s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:05,628 | INFO     | monitor loop #318: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:05,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:07,228 | INFO     | time since job start (4622s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:08,147 | INFO     | monitor loop #319: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:08,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:10,579 | INFO     | PID=1399816 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 14:35:22] 2025-12-17 19:34:10,579 | INFO     | .. there are 46 such processes running
[2025-12-17 14:35:22] 2025-12-17 19:34:10,652 | INFO     | monitor loop #320: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:10,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:11,580 | INFO     | time since job start (4626s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:13,156 | INFO     | monitor loop #321: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:13,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:13,590 | INFO     | time since job start (4628s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:15,597 | INFO     | time since job start (4630s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:15,667 | INFO     | monitor loop #322: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:15,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:17,604 | INFO     | time since job start (4632s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:18,173 | INFO     | monitor loop #323: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:18,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:19,611 | INFO     | time since job start (4634s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:20,680 | INFO     | monitor loop #324: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:20,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:21,622 | INFO     | time since job start (4636s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:23,187 | INFO     | monitor loop #325: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:23,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:23,629 | INFO     | time since job start (4638s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:25,636 | INFO     | time since job start (4640s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:25,697 | INFO     | monitor loop #326: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:25,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:27,643 | INFO     | time since job start (4642s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:28,203 | INFO     | monitor loop #327: job 0:6932418390 is in state 'finished'
[2025-12-17 14:35:22] 2025-12-17 19:34:28,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,502 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 14:35:22] 2025-12-17 19:34:29,507 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3352.1413828125005
[2025-12-17 14:35:22] 2025-12-17 19:34:29,521 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6932418390/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,522 | INFO     | extracted standard info from prmon json
[2025-12-17 14:35:22] 2025-12-17 19:34:29,522 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 14:35:22] 2025-12-17 19:34:29,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 14:35:22] 2025-12-17 19:34:29,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 14:35:22] 2025-12-17 19:34:29,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 14:35:22] 2025-12-17 19:34:29,523 | INFO     | fitting pss+swap vs Time
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | sum of square deviations: 93241916.98507474
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | sum of deviations: -5734382529.626866
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | mean x: 1765997841.0149255
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | mean y: 2707917.6268656715
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | intersect: 108611662927.59056
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | chi2: 0.03560308896047246
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | current memory leak: -61.50 B/s (using 67 data points, chi2=0.04)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | could have reported an average CPU frequency of 3720 MHz (6 samples)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,524 | INFO     | ..............................
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . Timing measurements:
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . get job = 0 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . initial setup = 5 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . payload setup = 27 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . stage-in = 0 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . payload execution = 4511 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . stage-out = 2 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | . log creation = 0 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,525 | INFO     | ..............................
[2025-12-17 14:35:22] 2025-12-17 19:34:29,584 | INFO     | 
[2025-12-17 14:35:22] 2025-12-17 19:34:29,584 | INFO     | job summary report
[2025-12-17 14:35:22] 2025-12-17 19:34:29,584 | INFO     | --------------------------------------------------
[2025-12-17 14:35:22] 2025-12-17 19:34:29,584 | INFO     | PanDA job id: 6932418390
[2025-12-17 14:35:22] 2025-12-17 19:34:29,584 | INFO     | task id: 47905873
[2025-12-17 14:35:22] 2025-12-17 19:34:29,584 | INFO     | errors: (none)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | pilot state: finished 
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | transexitcode: 0
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | exeerrorcode: 0
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | exeerrordiag: 
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | exitcode: 0
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | exitmsg: OK
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | cpuconsumptiontime: 32702 s
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | nevents: 400
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | neventsw: 0
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | pid: 1414792
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | pgrp: 1414792
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | corecount: 11
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | event service: False
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | sizes: {0: 2283683, 1: 2283882, 12: 2283882, 23: 2284200, 33: 2284200, 4543: 2310528, 4546: 2319526, 4549: 2319582, 4590: 2319776}
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | --------------------------------------------------
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | 
[2025-12-17 14:35:22] 2025-12-17 19:34:29,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 14:35:22] 2025-12-17 19:34:29,650 | INFO     | time since job start (4644s) is within the limit (174528.0s)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | job 6932418390 has completed (purged errors)
[2025-12-17 14:35:22] 2025-12-17 19:34:29,704 | INFO     | overall cleanup function is called
[2025-12-17 14:35:22] 2025-12-17 19:34:30,712 | INFO     | --- collectZombieJob: --- 10, [1414792]
[2025-12-17 14:35:22] 2025-12-17 19:34:30,712 | INFO     | zombie collector waiting for pid 1414792
[2025-12-17 14:35:22] 2025-12-17 19:34:30,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 14:35:22] 2025-12-17 19:34:30,712 | INFO     | collected zombie processes
[2025-12-17 14:35:22] 2025-12-17 19:34:30,712 | INFO     | will attempt to kill all subprocesses of pid=1414792
[2025-12-17 14:35:22] 2025-12-17 19:34:32,015 | INFO     | process IDs to be killed: [1414792] (in reverse order)
[2025-12-17 14:35:22] 2025-12-17 19:34:32,328 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 14:35:22] 2025-12-17 19:34:32,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 14:35:22] 2025-12-17 19:34:32,389 | INFO     | did not find any defunct processes belonging to 1414792
[2025-12-17 14:35:22] 2025-12-17 19:34:32,452 | INFO     | did not find any defunct processes belonging to 1414792
[2025-12-17 14:35:22] 2025-12-17 19:34:32,453 | INFO     | ready for new job
[2025-12-17 14:35:22] 2025-12-17 19:34:32,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 14:35:22] 2025-12-17 19:34:32,454 | INFO     | ***************************************
[2025-12-17 14:35:22] 2025-12-17 19:34:32,454 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 14:35:22] 2025-12-17 19:34:32,454 | INFO     | ***************************************
[2025-12-17 14:35:22] 2025-12-17 19:34:32,454 | INFO     | 
[2025-12-17 14:35:22] 2025-12-17 19:34:32,464 | INFO     | architecture information:
[2025-12-17 14:35:22] 2025-12-17 19:34:32,466 | INFO     | executing command: cat /etc/os-release
[2025-12-17 14:35:22] 2025-12-17 19:34:32,524 | INFO     | cat /etc/os-release:
[2025-12-17 14:35:22] NAME="CentOS Linux"
[2025-12-17 14:35:22] VERSION="7 (Core)"
[2025-12-17 14:35:22] ID="centos"
[2025-12-17 14:35:22] ID_LIKE="rhel fedora"
[2025-12-17 14:35:22] VERSION_ID="7"
[2025-12-17 14:35:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 14:35:22] ANSI_COLOR="0;31"
[2025-12-17 14:35:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 14:35:22] HOME_URL="https://www.centos.org/"
[2025-12-17 14:35:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 14:35:22] 
[2025-12-17 14:35:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 14:35:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 14:35:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 14:35:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 14:35:22] 
[2025-12-17 14:35:22] 2025-12-17 19:34:32,524 | INFO     | ***************************************
[2025-12-17 14:35:22] 2025-12-17 19:34:33,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 14:35:22] 2025-12-17 19:34:33,177 | INFO     | sufficient remaining disk space (168959148032 B)
[2025-12-17 14:35:22] 2025-12-17 19:34:33,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 14:35:22] 2025-12-17 19:34:33,177 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 14:35:22] 2025-12-17 19:34:33,178 | INFO     | update_server=False
[2025-12-17 14:35:22] 2025-12-17 19:34:33,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 14:35:22] 2025-12-17 19:34:33,225 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 14:35:22] 2025-12-17 19:34:33,225 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 14:35:22] 2025-12-17 19:34:33,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:35:22] 2025-12-17 19:34:33,225 | INFO     | will abort loop
[2025-12-17 14:35:22] 2025-12-17 19:34:33,589 | INFO     | all data control threads have been joined
[2025-12-17 14:35:22] 2025-12-17 19:34:34,093 | INFO     | all payload control threads have been joined
[2025-12-17 14:35:22] 2025-12-17 19:34:34,184 | INFO     | [job] retrieve thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,231 | INFO     | [job] job monitor thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,245 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,245 | INFO     | [job] validate thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,401 | INFO     | [payload] validate_post thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 14:35:22] 2025-12-17 19:34:34,514 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,594 | INFO     | [data] control thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:35:22] 2025-12-17 19:34:34,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:34,629 | INFO     | all job control threads have been joined
[2025-12-17 14:35:22] 2025-12-17 19:34:35,130 | INFO     | [payload] control thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:35,306 | INFO     | [data] copytool_in thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:35,344 | INFO     | [payload] failed_post thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:35,431 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:35,605 | INFO     | [job] queue monitor thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:35,636 | INFO     | [job] control thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:35,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 14:35:22] 2025-12-17 19:34:36,434 | INFO     | [data] copytool_out thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:34:39,718 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 14:35:22] 2025-12-17 19:35:07,196 | INFO     | PID=1399816 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 14:35:22] 2025-12-17 19:35:07,197 | INFO     | .. there are 46 such processes running
[2025-12-17 14:35:22] 2025-12-17 19:35:07,197 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 14:35:22] 2025-12-17 19:35:07,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 14:35:22] 2025-12-17 19:35:07,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 14:35:22] 2025-12-17 19:35:13,033 | INFO     | [monitor] cgroup control has ended
[2025-12-17 14:35:22] 2025-12-17 19:35:14,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760790386496)>', '<ExcThread(monitor, started 139760299398912)>']
[2025-12-17 14:35:22] 2025-12-17 19:35:15,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 14:35:22] 2025-12-17 19:35:15,256 | INFO     | [monitor] control thread has ended
[2025-12-17 14:35:22] 2025-12-17 19:35:20,021 | INFO     | all workflow threads have been joined
[2025-12-17 14:35:22] 2025-12-17 19:35:20,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 14:35:22] 2025-12-17 19:35:20,021 | INFO     | traces error code: 0
[2025-12-17 14:35:22] 2025-12-17 19:35:20,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 14:35:22] 2025-12-17 19:35:20,430 [wrapper] ==== pilot stdout END ====
[2025-12-17 14:35:22] 2025-12-17 19:35:20,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 14:35:22] 2025-12-17 19:35:20,476 [wrapper] pilotpid: 1399816
[2025-12-17 14:35:22] 2025-12-17 19:35:20,499 [wrapper] Pilot exit status: 0
[2025-12-17 14:35:22] 2025-12-17 19:35:20,665 [wrapper] pandaids: 6932418390
[2025-12-17 14:35:22] 2025-12-17 19:35:20,920 [wrapper] cleanup supervisor_pilot 2249654 1399817
[2025-12-17 14:35:22] 2025-12-17 19:35:20,967 [wrapper] Test setup, not cleaning
[2025-12-17 14:35:22] 2025-12-17 19:35:21,011 [wrapper] apfmon messages muted
[2025-12-17 14:35:22] 2025-12-17 19:35:21,047 [wrapper] ==== wrapper stdout END ====
[2025-12-17 14:35:22] 2025-12-17 19:35:21,091 [wrapper] ==== wrapper stderr END ====
[2025-12-17 14:35:22]  *** Error codes and diagnostics ***
[2025-12-17 14:35:22]     "exeErrorCode": 0,
[2025-12-17 14:35:22]     "exeErrorDiag": "",
[2025-12-17 14:35:22]     "pilotErrorCode": 0,
[2025-12-17 14:35:22]     "pilotErrorDiag": "",
[2025-12-17 14:35:22]  *** Listing of results directory ***
[2025-12-17 14:35:22] total 403960
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 06:17 pilot3.tar.gz
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 06:19 queuedata.json
[2025-12-17 14:35:22] -rwx------. 1 boincer umatlas     36322 Dec 17 06:21 runpilot2-wrapper.sh
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas       100 Dec 17 13:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 14:35:22] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 13:15 run_atlas
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas       105 Dec 17 13:15 job.xml
[2025-12-17 14:35:22] -rw-r--r--. 2 boincer umatlas 201227949 Dec 17 13:15 EVNT.47905871._000045.pool.root.1
[2025-12-17 14:35:22] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 13:15 shared
[2025-12-17 14:35:22] -rw-r--r--. 2 boincer umatlas    592380 Dec 17 13:15 input.tar.gz
[2025-12-17 14:35:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 13:15 start_atlas.sh
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas         0 Dec 17 13:15 boinc_lockfile
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas      2469 Dec 17 13:16 pandaJob.out
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas        57 Dec 17 13:16 setup.sh.local
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas    988136 Dec 17 13:17 agis_schedconf.cvmfs.json
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas   1516240 Dec 17 13:17 agis_ddmendpoints.agis.ALL.json
[2025-12-17 14:35:22] drwx------. 5 boincer umatlas      4096 Dec 17 13:17 pilot3
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas      7171 Dec 17 14:31 init_data.xml
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas 206495990 Dec 17 14:31 HITS.47905873._001182.pool.root.1
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas       529 Dec 17 14:31 boinc_task_state.xml
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas      1061 Dec 17 14:33 memory_monitor_summary.json
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas    362980 Dec 17 14:33 log.47905873._001182.job.log.tgz.1
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas      7803 Dec 17 14:34 heartbeat.json
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas        95 Dec 17 14:35 pilot_heartbeat.json
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 14:35 boinc_mmap_file
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas      5011 Dec 17 14:35 pilotlog.txt
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas        27 Dec 17 14:35 wrapper_checkpoint.txt
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas    644449 Dec 17 14:35 log.47905873._001182.job.log.1
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas       357 Dec 17 14:35 output.list
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas       620 Dec 17 14:35 runtime_log
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas   1024000 Dec 17 14:35 result.tar.gz
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas       655 Dec 17 14:35 xcIMDmQm4p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjXXKDmb6U5Sn.diag
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas      9334 Dec 17 14:35 runtime_log.err
[2025-12-17 14:35:22] -rw-r--r--. 1 boincer umatlas     22406 Dec 17 14:35 stderr.txt
[2025-12-17 14:35:22] HITS file was successfully produced:
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas 206495990 Dec 17 14:31 shared/HITS.pool.root.1
[2025-12-17 14:35:22]  *** Contents of shared directory: ***
[2025-12-17 14:35:22] total 399776
[2025-12-17 14:35:22] -rw-r--r--. 2 boincer umatlas 201227949 Dec 17 13:15 ATLAS.root_0
[2025-12-17 14:35:22] -rw-r--r--. 2 boincer umatlas    592380 Dec 17 13:15 input.tar.gz
[2025-12-17 14:35:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 13:15 start_atlas.sh
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas 206495990 Dec 17 14:31 HITS.pool.root.1
[2025-12-17 14:35:22] -rw-------. 1 boincer umatlas   1024000 Dec 17 14:35 result.tar.gz
14:35:23 (1391164): run_atlas exited; CPU time 32851.970356
14:35:23 (1391164): called boinc_finish(0)

</stderr_txt>
]]>

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