Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:19:09 (3141993): wrapper (7.7.26015): starting
03:19:09 (3141993): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 03:19:09] Arguments: --nthreads 4
[2025-12-18 03:19:09] Threads: 4
[2025-12-18 03:19:09] Checking for CVMFS
[2025-12-18 03:19:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 03:19:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 03:19:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 03:19:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 03:19:10] 2.13.1.0 9815 6152 88044 154130 0 56 9173067 10240000 911 130560 0 7847293 99.936 543336 415 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-18 03:19:10] CVMFS is ok
[2025-12-18 03:19:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 03:19:10] Checking for apptainer binary...
[2025-12-18 03:19:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 03:19:10] Running /usr/bin/apptainer --version
[2025-12-18 03:19:10] apptainer version 1.4.5
[2025-12-18 03:19:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 03:19:10] atlas6l1
[2025-12-18 03:19:10] apptainer works
[2025-12-18 03:19:10] Set ATHENA_PROC_NUMBER=4
[2025-12-18 03:19:10] Set ATHENA_CORE_NUMBER=4
[2025-12-18 03:19:10] Starting ATLAS job with PandaID=6932342222
[2025-12-18 03:19:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 04:59:33]  *** The last 200 lines of the pilot log: ***
[2025-12-18 04:59:33]  storage_token=
[2025-12-18 04:59:33]  surl=/var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6932342222/log.47886933._009392.job.log.tgz.1
[2025-12-18 04:59:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/1e/log.47886933._009392.job.log.tgz.1
[2025-12-18 04:59:33]  workdir=None
[2025-12-18 04:59:33] ]
[2025-12-18 04:59:33] 2025-12-18 03:58:35,227 | INFO     | transferring file log.47886933._009392.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6932342222/log.47886933._009392.job.log.tgz.1 to /var/li
[2025-12-18 04:59:33] 2025-12-18 03:58:35,227 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6932342222/log.47886933._009392.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-18 04:59:33] 2025-12-18 03:58:35,247 | INFO     | adding to output.list: log.47886933._009392.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/1e/log.47886933._009392.job.log.tg
[2025-12-18 04:59:33] 2025-12-18 03:58:35,249 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-18 04:59:33] 2025-12-18 03:58:35,249 | INFO     | summary of transferred files:
[2025-12-18 04:59:33] 2025-12-18 03:58:35,249 | INFO     |  -- lfn=log.47886933._009392.job.log.tgz.1, status_code=0, status=transferred
[2025-12-18 04:59:33] 2025-12-18 03:58:35,249 | INFO     | stage-out finished correctly
[2025-12-18 04:59:33] 2025-12-18 03:58:35,299 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 04:59:33] 2025-12-18 03:58:35,585 | INFO     | time since job start (5956s) is within the limit (174528.0s)
[2025-12-18 04:59:33] 2025-12-18 03:58:36,567 | INFO     | monitor loop #456: job 0:6932342222 is in state 'finished'
[2025-12-18 04:59:33] 2025-12-18 03:58:36,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 04:59:33] 2025-12-18 03:58:37,591 | INFO     | time since job start (5958s) is within the limit (174528.0s)
[2025-12-18 04:59:33] 2025-12-18 03:58:37,957 | INFO     | job 6932342222 has state=finished
[2025-12-18 04:59:33] 2025-12-18 03:58:37,957 | INFO     | preparing for final server update for job 6932342222 in state='finished'
[2025-12-18 04:59:33] 2025-12-18 03:58:37,958 | INFO     | this job has now completed (state=finished)
[2025-12-18 04:59:33] 2025-12-18 03:58:37,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 04:59:33] 2025-12-18 03:58:37,958 | INFO     | log transfer has been attempted: DONE
[2025-12-18 04:59:33] 2025-12-18 03:58:37,959 | INFO     | job 6932342222 has finished - writing final server update
[2025-12-18 04:59:33] 2025-12-18 03:58:37,959 | INFO     | total number of processed events: 400 (read)
[2025-12-18 04:59:33] 2025-12-18 03:58:37,960 | INFO     | executing command: lscpu
[2025-12-18 04:59:33] 2025-12-18 03:58:37,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 04:59:33] 2025-12-18 03:58:39,070 | INFO     | monitor loop #457: job 0:6932342222 is in state 'finished'
[2025-12-18 04:59:33] 2025-12-18 03:58:39,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 04:59:33] 2025-12-18 03:58:39,597 | INFO     | time since job start (5960s) is within the limit (174528.0s)
[2025-12-18 04:59:33] 2025-12-18 03:58:40,694 | INFO     | PID=3145790 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 04:59:33] 2025-12-18 03:58:40,694 | INFO     | .. there are 2 such processes running
[2025-12-18 04:59:33] 2025-12-18 03:58:41,574 | INFO     | monitor loop #458: job 0:6932342222 is in state 'finished'
[2025-12-18 04:59:33] 2025-12-18 03:58:41,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 04:59:33] 2025-12-18 03:58:41,695 | INFO     | time since job start (5962s) is within the limit (174528.0s)
[2025-12-18 04:59:33] 2025-12-18 03:58:41,905 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-18 04:59:33] 2025-12-18 03:58:41,906 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-18 04:59:33] 2025-12-18 03:58:41,907 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6932342222/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 04:59:33] 2025-12-18 03:58:41,908 | INFO     | extracted standard info from prmon json
[2025-12-18 04:59:33] 2025-12-18 03:58:41,908 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 04:59:33] 2025-12-18 03:58:41,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 04:59:33] 2025-12-18 03:58:41,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 04:59:33] 2025-12-18 03:58:41,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 04:59:33] 2025-12-18 03:58:41,909 | INFO     | fitting pss+swap vs Time
[2025-12-18 04:59:33] 2025-12-18 03:58:41,909 | INFO     | sum of square deviations: 233641590.0
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | sum of deviations: -20453204474.0
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | mean x: 1766027429.0
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | mean y: 2469294.2197802197
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | intersect: 154602170965.61108
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | chi2: 0.06211607144578316
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | current memory leak: -87.54 B/s (using 91 data points, chi2=0.06)
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | could have reported an average CPU frequency of 2400 MHz (7 samples)
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | ..............................
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . Timing measurements:
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . get job = 0 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . initial setup = 2 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . payload setup = 3 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . stage-in = 0 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . payload execution = 5933 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . stage-out = 0 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,910 | INFO     | . log creation = 0 s
[2025-12-18 04:59:33] 2025-12-18 03:58:41,911 | INFO     | ..............................
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | 
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | job summary report
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | --------------------------------------------------
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | PanDA job id: 6932342222
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | task id: 47886933
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | errors: (none)
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | pilot state: finished 
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | transexitcode: 0
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | exeerrorcode: 0
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | exeerrordiag: 
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | exitcode: 0
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | exitmsg: OK
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | cpuconsumptiontime: 22598 s
[2025-12-18 04:59:33] 2025-12-18 03:58:42,065 | INFO     | nevents: 400
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | neventsw: 0
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | pid: 3152334
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | pgrp: 3152334
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | corecount: 4
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | event service: False
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | sizes: {0: 2283809, 1: 2284008, 3: 2284270, 11: 2284298, 5940: 2311120, 5941: 2311119, 5942: 2320385, 5949: 2320523}
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | --------------------------------------------------
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | 
[2025-12-18 04:59:33] 2025-12-18 03:58:42,066 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-18 04:59:33] 2025-12-18 03:58:42,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 04:59:33] 2025-12-18 03:58:42,079 | INFO     | job 6932342222 has completed (purged errors)
[2025-12-18 04:59:33] 2025-12-18 03:58:42,079 | INFO     | overall cleanup function is called
[2025-12-18 04:59:33] 2025-12-18 03:58:43,082 | INFO     | --- collectZombieJob: --- 10, [3152334]
[2025-12-18 04:59:33] 2025-12-18 03:58:43,082 | INFO     | zombie collector waiting for pid 3152334
[2025-12-18 04:59:33] 2025-12-18 03:58:43,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 04:59:33] 2025-12-18 03:58:43,083 | INFO     | collected zombie processes
[2025-12-18 04:59:33] 2025-12-18 03:58:43,083 | INFO     | will attempt to kill all subprocesses of pid=3152334
[2025-12-18 04:59:33] 2025-12-18 03:58:43,168 | INFO     | process IDs to be killed: [3152334] (in reverse order)
[2025-12-18 04:59:33] 2025-12-18 03:58:43,207 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 04:59:33] 2025-12-18 03:58:43,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 04:59:33] 2025-12-18 03:58:43,209 | INFO     | did not find any defunct processes belonging to 3152334
[2025-12-18 04:59:33] 2025-12-18 03:58:43,211 | INFO     | did not find any defunct processes belonging to 3152334
[2025-12-18 04:59:33] 2025-12-18 03:58:43,211 | INFO     | ready for new job
[2025-12-18 04:59:33] 2025-12-18 03:58:43,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 04:59:33] 2025-12-18 03:58:43,212 | INFO     | ***************************************
[2025-12-18 04:59:33] 2025-12-18 03:58:43,212 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 04:59:33] 2025-12-18 03:58:43,212 | INFO     | ***************************************
[2025-12-18 04:59:33] 2025-12-18 03:58:43,213 | INFO     | 
[2025-12-18 04:59:33] 2025-12-18 03:58:43,213 | INFO     | pilot is running in a VM
[2025-12-18 04:59:33] 2025-12-18 03:58:43,213 | INFO     | architecture information:
[2025-12-18 04:59:33] 2025-12-18 03:58:43,213 | INFO     | executing command: cat /etc/os-release
[2025-12-18 04:59:33] 2025-12-18 03:58:43,222 | INFO     | cat /etc/os-release:
[2025-12-18 04:59:33] NAME="CentOS Linux"
[2025-12-18 04:59:33] VERSION="7 (Core)"
[2025-12-18 04:59:33] ID="centos"
[2025-12-18 04:59:33] ID_LIKE="rhel fedora"
[2025-12-18 04:59:33] VERSION_ID="7"
[2025-12-18 04:59:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 04:59:33] ANSI_COLOR="0;31"
[2025-12-18 04:59:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 04:59:33] HOME_URL="https://www.centos.org/"
[2025-12-18 04:59:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 04:59:33] 
[2025-12-18 04:59:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 04:59:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 04:59:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 04:59:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 04:59:33] 
[2025-12-18 04:59:33] 2025-12-18 03:58:43,222 | INFO     | ***************************************
[2025-12-18 04:59:33] 2025-12-18 03:58:43,724 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-18 04:59:33] 2025-12-18 03:58:43,738 | INFO     | sufficient remaining disk space (157456269312 B)
[2025-12-18 04:59:33] 2025-12-18 03:58:43,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 04:59:33] 2025-12-18 03:58:43,738 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 04:59:33] 2025-12-18 03:58:43,738 | INFO     | update_server=False
[2025-12-18 04:59:33] 2025-12-18 03:58:43,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 04:59:33] 2025-12-18 03:58:43,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 04:59:33] 2025-12-18 03:58:43,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 04:59:33] 2025-12-18 03:58:44,078 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-18 04:59:33] 2025-12-18 03:58:44,078 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-18 04:59:33] 2025-12-18 03:58:44,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 04:59:33] 2025-12-18 03:58:44,078 | INFO     | will abort loop
[2025-12-18 04:59:33] 2025-12-18 03:58:44,270 | INFO     | all job control threads have been joined
[2025-12-18 04:59:33] 2025-12-18 03:58:44,668 | INFO     | all data control threads have been joined
[2025-12-18 04:59:33] 2025-12-18 03:58:44,739 | INFO     | [job] retrieve thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:44,740 | INFO     | [job] queue monitor thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:44,841 | INFO     | all payload control threads have been joined
[2025-12-18 04:59:33] 2025-12-18 03:58:44,972 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:44,973 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,083 | INFO     | [job] job monitor thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,275 | INFO     | [job] control thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,279 | INFO     | [payload] failed_post thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,669 | INFO     | [data] control thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,744 | INFO     | [data] copytool_out thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,811 | INFO     | [payload] validate_post thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,846 | INFO     | [payload] control thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,847 | INFO     | [data] copytool_in thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:45,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 04:59:33] 2025-12-18 03:58:46,125 | INFO     | [job] validate thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:46,240 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:49,867 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:58:54,490 | INFO     | job.realtimelogging is not enabled
[2025-12-18 04:59:33] 2025-12-18 03:58:55,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 04:59:33] 2025-12-18 03:59:14,886 | INFO     | PID=3145790 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-18 04:59:33] 2025-12-18 03:59:14,887 | INFO     | .. there are 2 such processes running
[2025-12-18 04:59:33] 2025-12-18 03:59:14,887 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 04:59:33] 2025-12-18 03:59:14,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 04:59:33] 2025-12-18 03:59:14,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 04:59:33] 2025-12-18 03:59:27,363 | INFO     | [monitor] cgroup control has ended
[2025-12-18 04:59:33] 2025-12-18 03:59:28,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134102719379264)>', '<ExcThread(monitor, started 134102082639616)>']
[2025-12-18 04:59:33] 2025-12-18 03:59:28,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 04:59:33] 2025-12-18 03:59:28,953 | INFO     | [monitor] control thread has ended
[2025-12-18 04:59:33] 2025-12-18 03:59:33,039 | INFO     | all workflow threads have been joined
[2025-12-18 04:59:33] 2025-12-18 03:59:33,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 04:59:33] 2025-12-18 03:59:33,039 | INFO     | traces error code: 0
[2025-12-18 04:59:33] 2025-12-18 03:59:33,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 04:59:33] 2025-12-18 03:59:33,108 [wrapper] ==== pilot stdout END ====
[2025-12-18 04:59:33] 2025-12-18 03:59:33,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 04:59:33] 2025-12-18 03:59:33,116 [wrapper] pilotpid: 3145790
[2025-12-18 04:59:33] 2025-12-18 03:59:33,120 [wrapper] Pilot exit status: 0
[2025-12-18 04:59:33] 2025-12-18 03:59:33,137 [wrapper] pandaids: 6932342222
[2025-12-18 04:59:33] 2025-12-18 03:59:33,169 [wrapper] cleanup supervisor_pilot 3194265 3145791
[2025-12-18 04:59:33] 2025-12-18 03:59:33,174 [wrapper] Test setup, not cleaning
[2025-12-18 04:59:33] 2025-12-18 03:59:33,177 [wrapper] apfmon messages muted
[2025-12-18 04:59:33] 2025-12-18 03:59:33,179 [wrapper] ==== wrapper stdout END ====
[2025-12-18 04:59:33] 2025-12-18 03:59:33,181 [wrapper] ==== wrapper stderr END ====
[2025-12-18 04:59:33]  *** Error codes and diagnostics ***
[2025-12-18 04:59:33]     "exeErrorCode": 0,
[2025-12-18 04:59:33]     "exeErrorDiag": "",
[2025-12-18 04:59:33]     "pilotErrorCode": 0,
[2025-12-18 04:59:33]     "pilotErrorDiag": "",
[2025-12-18 04:59:33]  *** Listing of results directory ***
[2025-12-18 04:59:33] insgesamt 341916
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc    579449 Dez 17 12:17 pilot3.tar.gz
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc      5112 Dez 17 12:19 queuedata.json
[2025-12-18 04:59:33] -rwx------ 1 yeti boinc     36322 Dez 17 12:20 runpilot2-wrapper.sh
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc       100 Dez 18 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 04:59:33] -rwxr-xr-x 1 yeti boinc      7986 Dez 18 03:19 run_atlas
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc       105 Dez 18 03:19 job.xml
[2025-12-18 04:59:33] -rw-r--r-- 2 yeti boinc 191586872 Dez 18 03:19 EVNT.47886929._000381.pool.root.1
[2025-12-18 04:59:33] -rw-r--r-- 2 yeti boinc     15847 Dez 18 03:19 start_atlas.sh
[2025-12-18 04:59:33] drwxrwx--x 2 yeti boinc      4096 Dez 18 03:19 shared
[2025-12-18 04:59:33] -rw-r--r-- 2 yeti boinc    592398 Dez 18 03:19 input.tar.gz
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc      6594 Dez 18 03:19 init_data.xml
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc         0 Dez 18 03:19 boinc_setup_complete
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc         0 Dez 18 03:19 boinc_lockfile
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc      2514 Dez 18 03:19 pandaJob.out
[2025-12-18 04:59:33] -rw------- 1 yeti boinc    988110 Dez 18 03:19 agis_schedconf.cvmfs.json
[2025-12-18 04:59:33] -rw------- 1 yeti boinc   1516240 Dez 18 03:19 agis_ddmendpoints.agis.ALL.json
[2025-12-18 04:59:33] drwx------ 5 yeti boinc      4096 Dez 18 03:19 pilot3
[2025-12-18 04:59:33] -rw------- 1 yeti boinc 152254450 Dez 18 04:58 HITS.47886933._009392.pool.root.1
[2025-12-18 04:59:33] -rw------- 1 yeti boinc      1026 Dez 18 04:58 memory_monitor_summary.json
[2025-12-18 04:59:33] -rw------- 1 yeti boinc    292585 Dez 18 04:58 log.47886933._009392.job.log.tgz.1
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc       529 Dez 18 04:58 boinc_task_state.xml
[2025-12-18 04:59:33] -rw------- 1 yeti boinc      7774 Dez 18 04:58 heartbeat.json
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc      8192 Dez 18 04:59 boinc_mmap_file
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc        27 Dez 18 04:59 wrapper_checkpoint.txt
[2025-12-18 04:59:33] -rw------- 1 yeti boinc        95 Dez 18 04:59 pilot_heartbeat.json
[2025-12-18 04:59:33] -rw------- 1 yeti boinc      5158 Dez 18 04:59 pilotlog.txt
[2025-12-18 04:59:33] -rw------- 1 yeti boinc    891072 Dez 18 04:59 log.47886933._009392.job.log.1
[2025-12-18 04:59:33] -rw------- 1 yeti boinc       357 Dez 18 04:59 output.list
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc       620 Dez 18 04:59 runtime_log
[2025-12-18 04:59:33] -rw------- 1 yeti boinc   1198080 Dez 18 04:59 result.tar.gz
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc      9017 Dez 18 04:59 runtime_log.err
[2025-12-18 04:59:33] -rw------- 1 yeti boinc       639 Dez 18 04:59 RMcKDmSl4p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm42bKDmXIjrum.diag
[2025-12-18 04:59:33] -rw-r--r-- 1 yeti boinc     21982 Dez 18 04:59 stderr.txt
[2025-12-18 04:59:33] HITS file was successfully produced:
[2025-12-18 04:59:33] -rw------- 1 yeti boinc 152254450 Dez 18 04:58 shared/HITS.pool.root.1
[2025-12-18 04:59:33]  *** Contents of shared directory: ***
[2025-12-18 04:59:33] insgesamt 337564
[2025-12-18 04:59:33] -rw-r--r-- 2 yeti boinc 191586872 Dez 18 03:19 ATLAS.root_0
[2025-12-18 04:59:33] -rw-r--r-- 2 yeti boinc     15847 Dez 18 03:19 start_atlas.sh
[2025-12-18 04:59:33] -rw-r--r-- 2 yeti boinc    592398 Dez 18 03:19 input.tar.gz
[2025-12-18 04:59:33] -rw------- 1 yeti boinc 152254450 Dez 18 04:58 HITS.pool.root.1
[2025-12-18 04:59:33] -rw------- 1 yeti boinc   1198080 Dez 18 04:59 result.tar.gz
04:59:34 (3141993): run_atlas exited; CPU time 22672.207099
04:59:34 (3141993): called boinc_finish(0)

</stderr_txt>
]]>

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