Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:27:34 (422638): wrapper (7.7.26015): starting
11:27:34 (422638): wrapper: running run_atlas (--nthreads 10)
[2025-12-17 11:27:34] Arguments: --nthreads 10
[2025-12-17 11:27:34] Threads: 10
[2025-12-17 11:27:34] Checking for CVMFS
[2025-12-17 11:27:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 11:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 11:27:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 11:27:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 11:27:35] 2.13.3.0 14106 60480 240456 154112 3 1383 40196505 40959831 33091 16776704 0 819381599 99.724 596289705 47080 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 11:27:35] CVMFS is ok
[2025-12-17 11:27:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 11:27:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 11:27:35] Further information can be found at the LHC@home message board.
[2025-12-17 11:27:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 11:27:35] Checking for apptainer binary...
[2025-12-17 11:27:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 11:27:35] Running /usr/bin/apptainer --version
[2025-12-17 11:27:35] apptainer version 1.4.5-2.el9
[2025-12-17 11:27:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 11:27:36] c8-7-5.aglt2.org
[2025-12-17 11:27:36] apptainer works
[2025-12-17 11:27:36] Set ATHENA_PROC_NUMBER=10
[2025-12-17 11:27:36] Set ATHENA_CORE_NUMBER=10
[2025-12-17 11:27:36] Starting ATLAS job with PandaID=6932172742
[2025-12-17 11:27:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 12:46:39]  *** The last 200 lines of the pilot log: ***
[2025-12-17 12:46:39]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6932172742/log.47886831._017137.job.log.tgz.1
[2025-12-17 12:46:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/d3/log.47886831._017137.job.log.tgz.1
[2025-12-17 12:46:39]  workdir=None
[2025-12-17 12:46:39] ]
[2025-12-17 12:46:39] 2025-12-17 17:45:34,737 | INFO     | transferring file log.47886831._017137.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6932172742/log.47886831._017137.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-17 12:46:39] 2025-12-17 17:45:34,737 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6932172742/log.47886831._017137.job.log.tgz.1 /tmp/boinchome/slots/1/log.47886831._017137.job
[2025-12-17 12:46:39] 2025-12-17 17:45:34,854 | INFO     | adding to output.list: log.47886831._017137.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/d3/log.47886831._017137.job.log.tg
[2025-12-17 12:46:39] 2025-12-17 17:45:34,855 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 12:46:39] 2025-12-17 17:45:34,855 | INFO     | summary of transferred files:
[2025-12-17 12:46:39] 2025-12-17 17:45:34,855 | INFO     |  -- lfn=log.47886831._017137.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 12:46:39] 2025-12-17 17:45:34,856 | INFO     | stage-out finished correctly
[2025-12-17 12:46:39] 2025-12-17 17:45:34,895 | INFO     | time since job start (4630s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:35,737 | INFO     | monitor loop #307: job 0:6932172742 is in state 'finished'
[2025-12-17 12:46:39] 2025-12-17 17:45:35,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:46:39] 2025-12-17 17:45:36,902 | INFO     | time since job start (4632s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:37,471 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 12:46:39] 2025-12-17 17:45:38,242 | INFO     | monitor loop #308: job 0:6932172742 is in state 'finished'
[2025-12-17 12:46:39] 2025-12-17 17:45:38,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:46:39] 2025-12-17 17:45:38,909 | INFO     | time since job start (4634s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:38,982 | INFO     | job 6932172742 has state=finished
[2025-12-17 12:46:39] 2025-12-17 17:45:38,982 | INFO     | preparing for final server update for job 6932172742 in state='finished'
[2025-12-17 12:46:39] 2025-12-17 17:45:38,982 | INFO     | this job has now completed (state=finished)
[2025-12-17 12:46:39] 2025-12-17 17:45:38,982 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 12:46:39] 2025-12-17 17:45:38,982 | INFO     | log transfer has been attempted: DONE
[2025-12-17 12:46:39] 2025-12-17 17:45:38,982 | INFO     | job 6932172742 has finished - writing final server update
[2025-12-17 12:46:39] 2025-12-17 17:45:38,983 | INFO     | total number of processed events: 400 (read)
[2025-12-17 12:46:39] 2025-12-17 17:45:38,988 | INFO     | executing command: lscpu
[2025-12-17 12:46:39] 2025-12-17 17:45:39,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 12:46:39] 2025-12-17 17:45:40,747 | INFO     | monitor loop #309: job 0:6932172742 is in state 'finished'
[2025-12-17 12:46:39] 2025-12-17 17:45:40,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:46:39] 2025-12-17 17:45:40,916 | INFO     | time since job start (4636s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:42,923 | INFO     | time since job start (4638s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:43,259 | INFO     | monitor loop #310: job 0:6932172742 is in state 'finished'
[2025-12-17 12:46:39] 2025-12-17 17:45:43,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:46:39] 2025-12-17 17:45:44,930 | INFO     | time since job start (4640s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:45,797 | INFO     | monitor loop #311: job 0:6932172742 is in state 'finished'
[2025-12-17 12:46:39] 2025-12-17 17:45:45,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:46:39] 2025-12-17 17:45:46,936 | INFO     | time since job start (4642s) is within the limit (174528.0s)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,034 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 12:46:39] 2025-12-17 17:45:48,039 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9929062499978
[2025-12-17 12:46:39] 2025-12-17 17:45:48,051 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6932172742/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,052 | INFO     | extracted standard info from prmon json
[2025-12-17 12:46:39] 2025-12-17 17:45:48,052 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 12:46:39] 2025-12-17 17:45:48,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 12:46:39] 2025-12-17 17:45:48,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 12:46:39] 2025-12-17 17:45:48,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | fitting pss+swap vs Time
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | sum of square deviations: 93240818.0
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | sum of deviations: -924063197.0000001
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | mean x: 1765991342.0
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | mean y: 2597244.6119402987
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | intersect: 17504455769.306995
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | chi2: 0.03258328864191505
[2025-12-17 12:46:39] 2025-12-17 17:45:48,054 | INFO     | current memory leak: -9.91 B/s (using 67 data points, chi2=0.03)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | ..............................
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . Timing measurements:
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . get job = 0 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . initial setup = 3 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . payload setup = 37 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . stage-in = 0 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . payload execution = 4531 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . stage-out = 1 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | . log creation = 0 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,055 | INFO     | ..............................
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | 
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | job summary report
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | --------------------------------------------------
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | PanDA job id: 6932172742
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | task id: 47886831
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | errors: (none)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | pilot state: finished 
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | transexitcode: 0
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | exeerrorcode: 0
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | exeerrordiag: 
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | exitcode: 0
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | exitmsg: OK
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | cpuconsumptiontime: 23519 s
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | nevents: 400
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | neventsw: 0
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | pid: 455973
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | pgrp: 455973
[2025-12-17 12:46:39] 2025-12-17 17:45:48,224 | INFO     | corecount: 10
[2025-12-17 12:46:39] 2025-12-17 17:45:48,225 | INFO     | event service: False
[2025-12-17 12:46:39] 2025-12-17 17:45:48,225 | INFO     | sizes: {0: 2283939, 1: 2283939, 11: 2283967, 22: 2283995, 23: 2284285, 33: 2284313, 4573: 2310649, 4575: 2319647, 4578: 2319703, 4588: 2319897}
[2025-12-17 12:46:39] 2025-12-17 17:45:48,225 | INFO     | --------------------------------------------------
[2025-12-17 12:46:39] 2025-12-17 17:45:48,225 | INFO     | 
[2025-12-17 12:46:39] 2025-12-17 17:45:48,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | job 6932172742 has completed (purged errors)
[2025-12-17 12:46:39] 2025-12-17 17:45:48,291 | INFO     | overall cleanup function is called
[2025-12-17 12:46:39] 2025-12-17 17:45:49,309 | INFO     | --- collectZombieJob: --- 10, [455973]
[2025-12-17 12:46:39] 2025-12-17 17:45:49,309 | INFO     | zombie collector waiting for pid 455973
[2025-12-17 12:46:39] 2025-12-17 17:45:49,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 12:46:39] 2025-12-17 17:45:49,309 | INFO     | collected zombie processes
[2025-12-17 12:46:39] 2025-12-17 17:45:49,309 | INFO     | will attempt to kill all subprocesses of pid=455973
[2025-12-17 12:46:39] 2025-12-17 17:45:49,999 | INFO     | process IDs to be killed: [455973] (in reverse order)
[2025-12-17 12:46:39] 2025-12-17 17:45:50,196 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 12:46:39] 2025-12-17 17:45:50,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 12:46:39] 2025-12-17 17:45:50,226 | INFO     | did not find any defunct processes belonging to 455973
[2025-12-17 12:46:39] 2025-12-17 17:45:50,256 | INFO     | did not find any defunct processes belonging to 455973
[2025-12-17 12:46:39] 2025-12-17 17:45:50,256 | INFO     | ready for new job
[2025-12-17 12:46:39] 2025-12-17 17:45:50,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 12:46:39] 2025-12-17 17:45:50,258 | INFO     | ***************************************
[2025-12-17 12:46:39] 2025-12-17 17:45:50,258 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 12:46:39] 2025-12-17 17:45:50,258 | INFO     | ***************************************
[2025-12-17 12:46:39] 2025-12-17 17:45:50,258 | INFO     | 
[2025-12-17 12:46:39] 2025-12-17 17:45:50,263 | INFO     | architecture information:
[2025-12-17 12:46:39] 2025-12-17 17:45:50,271 | INFO     | executing command: cat /etc/os-release
[2025-12-17 12:46:39] 2025-12-17 17:45:50,316 | INFO     | cat /etc/os-release:
[2025-12-17 12:46:39] NAME="CentOS Linux"
[2025-12-17 12:46:39] VERSION="7 (Core)"
[2025-12-17 12:46:39] ID="centos"
[2025-12-17 12:46:39] ID_LIKE="rhel fedora"
[2025-12-17 12:46:39] VERSION_ID="7"
[2025-12-17 12:46:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 12:46:39] ANSI_COLOR="0;31"
[2025-12-17 12:46:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 12:46:39] HOME_URL="https://www.centos.org/"
[2025-12-17 12:46:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 12:46:39] 
[2025-12-17 12:46:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 12:46:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 12:46:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 12:46:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 12:46:39] 
[2025-12-17 12:46:39] 2025-12-17 17:45:50,317 | INFO     | ***************************************
[2025-12-17 12:46:39] 2025-12-17 17:45:50,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-17 12:46:39] 2025-12-17 17:45:50,879 | INFO     | sufficient remaining disk space (170519429120 B)
[2025-12-17 12:46:39] 2025-12-17 17:45:50,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 12:46:39] 2025-12-17 17:45:50,882 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 12:46:39] 2025-12-17 17:45:50,883 | INFO     | update_server=False
[2025-12-17 12:46:39] 2025-12-17 17:45:50,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 12:46:39] 2025-12-17 17:45:50,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 12:46:39] 2025-12-17 17:45:50,890 | INFO     | all data control threads have been joined
[2025-12-17 12:46:39] 2025-12-17 17:45:51,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:46:39] 2025-12-17 17:45:51,818 | INFO     | aborting loop
[2025-12-17 12:46:39] 2025-12-17 17:45:51,889 | INFO     | [job] retrieve thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:51,889 | INFO     | all job control threads have been joined
[2025-12-17 12:46:39] 2025-12-17 17:45:51,897 | INFO     | [data] control thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:51,904 | INFO     | all payload control threads have been joined
[2025-12-17 12:46:39] 2025-12-17 17:45:52,078 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,147 | INFO     | [payload] validate_post thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,598 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 12:46:39] 2025-12-17 17:45:52,824 | INFO     | [job] job monitor thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,890 | INFO     | [data] copytool_out thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,908 | INFO     | [job] control thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,910 | INFO     | [payload] control thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:52,974 | INFO     | [payload] failed_post thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:53,075 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:53,084 | INFO     | [job] validate thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:53,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:46:39] 2025-12-17 17:45:53,128 | INFO     | [data] copytool_in thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:53,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:54,134 | INFO     | [job] queue monitor thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:45:56,627 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 12:46:39] 2025-12-17 17:46:20,805 | INFO     | PID=433545 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 12:46:39] 2025-12-17 17:46:20,805 | INFO     | .. there are 39 such processes running
[2025-12-17 12:46:39] 2025-12-17 17:46:20,805 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 12:46:39] 2025-12-17 17:46:20,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 12:46:39] 2025-12-17 17:46:20,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 12:46:39] 2025-12-17 17:46:31,899 | INFO     | [monitor] cgroup control has ended
[2025-12-17 12:46:39] 2025-12-17 17:46:32,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757927704384)>', '<ExcThread(monitor, started 139757287892736)>']
[2025-12-17 12:46:39] 2025-12-17 17:46:33,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 12:46:39] 2025-12-17 17:46:33,923 | INFO     | [monitor] control thread has ended
[2025-12-17 12:46:39] 2025-12-17 17:46:38,001 | INFO     | all workflow threads have been joined
[2025-12-17 12:46:39] 2025-12-17 17:46:38,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 12:46:39] 2025-12-17 17:46:38,003 | INFO     | traces error code: 0
[2025-12-17 12:46:39] 2025-12-17 17:46:38,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 12:46:39] 2025-12-17 17:46:38,435 [wrapper] ==== pilot stdout END ====
[2025-12-17 12:46:39] 2025-12-17 17:46:38,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 12:46:39] 2025-12-17 17:46:38,516 [wrapper] pilotpid: 433545
[2025-12-17 12:46:39] 2025-12-17 17:46:38,549 [wrapper] Pilot exit status: 0
[2025-12-17 12:46:39] 2025-12-17 17:46:38,734 [wrapper] pandaids: 6932172742
[2025-12-17 12:46:39] 2025-12-17 17:46:39,039 [wrapper] cleanup supervisor_pilot 1048200 433546
[2025-12-17 12:46:39] 2025-12-17 17:46:39,059 [wrapper] Test setup, not cleaning
[2025-12-17 12:46:39] 2025-12-17 17:46:39,096 [wrapper] apfmon messages muted
[2025-12-17 12:46:39] 2025-12-17 17:46:39,099 [wrapper] ==== wrapper stdout END ====
[2025-12-17 12:46:39] 2025-12-17 17:46:39,101 [wrapper] ==== wrapper stderr END ====
[2025-12-17 12:46:39]  *** Error codes and diagnostics ***
[2025-12-17 12:46:39]     "exeErrorCode": 0,
[2025-12-17 12:46:39]     "exeErrorDiag": "",
[2025-12-17 12:46:39]     "pilotErrorCode": 0,
[2025-12-17 12:46:39]     "pilotErrorDiag": "",
[2025-12-17 12:46:39]  *** Listing of results directory ***
[2025-12-17 12:46:39] total 333196
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 00:30 queuedata.json
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 00:30 pilot3.tar.gz
[2025-12-17 12:46:39] -rwx------. 1 boincer umatlas     36322 Dec 17 00:30 runpilot2-wrapper.sh
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas       100 Dec 17 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 12:46:39] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 11:27 run_atlas
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas       105 Dec 17 11:27 job.xml
[2025-12-17 12:46:39] -rw-r--r--. 2 boincer umatlas 189963016 Dec 17 11:27 EVNT.47886829._000118.pool.root.1
[2025-12-17 12:46:39] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 11:27 start_atlas.sh
[2025-12-17 12:46:39] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 11:27 shared
[2025-12-17 12:46:39] -rw-r--r--. 2 boincer umatlas    592418 Dec 17 11:27 input.tar.gz
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas         0 Dec 17 11:27 boinc_lockfile
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas      2537 Dec 17 11:27 pandaJob.out
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas        57 Dec 17 11:27 setup.sh.local
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas    987423 Dec 17 11:28 agis_schedconf.cvmfs.json
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas   1516240 Dec 17 11:28 agis_ddmendpoints.agis.ALL.json
[2025-12-17 12:46:39] drwx------. 5 boincer umatlas      4096 Dec 17 11:28 pilot3
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas 145344069 Dec 17 12:44 HITS.47886831._017137.pool.root.1
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas       529 Dec 17 12:44 boinc_task_state.xml
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas      1057 Dec 17 12:45 memory_monitor_summary.json
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas    353152 Dec 17 12:45 log.47886831._017137.job.log.tgz.1
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas      7793 Dec 17 12:45 heartbeat.json
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas      7172 Dec 17 12:46 init_data.xml
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas        95 Dec 17 12:46 pilot_heartbeat.json
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 12:46 boinc_mmap_file
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas        27 Dec 17 12:46 wrapper_checkpoint.txt
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas      4824 Dec 17 12:46 pilotlog.txt
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas    633122 Dec 17 12:46 log.47886831._017137.job.log.1
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas       357 Dec 17 12:46 output.list
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas       620 Dec 17 12:46 runtime_log
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas   1003520 Dec 17 12:46 result.tar.gz
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas      9334 Dec 17 12:46 runtime_log.err
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas       654 Dec 17 12:46 2GcLDmSIzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLPbKDmZaDyfm.diag
[2025-12-17 12:46:39] -rw-r--r--. 1 boincer umatlas     22392 Dec 17 12:46 stderr.txt
[2025-12-17 12:46:39] HITS file was successfully produced:
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas 145344069 Dec 17 12:44 shared/HITS.pool.root.1
[2025-12-17 12:46:39]  *** Contents of shared directory: ***
[2025-12-17 12:46:39] total 329032
[2025-12-17 12:46:39] -rw-r--r--. 2 boincer umatlas 189963016 Dec 17 11:27 ATLAS.root_0
[2025-12-17 12:46:39] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 11:27 start_atlas.sh
[2025-12-17 12:46:39] -rw-r--r--. 2 boincer umatlas    592418 Dec 17 11:27 input.tar.gz
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas 145344069 Dec 17 12:44 HITS.pool.root.1
[2025-12-17 12:46:39] -rw-------. 1 boincer umatlas   1003520 Dec 17 12:46 result.tar.gz
12:46:41 (422638): run_atlas exited; CPU time 23635.317479
12:46:41 (422638): called boinc_finish(0)

</stderr_txt>
]]>

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