Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:25:39 (331522): wrapper (7.7.26015): starting
12:25:39 (331522): wrapper: running run_atlas (--nthreads 9)
[2025-12-17 12:25:39] Arguments: --nthreads 9
[2025-12-17 12:25:39] Threads: 9
[2025-12-17 12:25:39] Checking for CVMFS
[2025-12-17 12:25:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 12:25:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 12:26:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 12:26:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 12:26:00] 2.13.2.0 9369 63438 223260 154115 2 64 37907581 39288832 8563 16776704 0 56965866 99.659 59316178 39916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 12:26:00] CVMFS is ok
[2025-12-17 12:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 12:26:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 12:26:00] Further information can be found at the LHC@home message board.
[2025-12-17 12:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 12:26:00] Checking for apptainer binary...
[2025-12-17 12:26:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 12:26:00] Running /usr/bin/apptainer --version
[2025-12-17 12:26:01] apptainer version 1.4.5-2.el9
[2025-12-17 12:26:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 12:26:02] c-210-23.aglt2.org
[2025-12-17 12:26:02] apptainer works
[2025-12-17 12:26:02] Set ATHENA_PROC_NUMBER=9
[2025-12-17 12:26:02] Set ATHENA_CORE_NUMBER=9
[2025-12-17 12:26:03] Starting ATLAS job with PandaID=6932172747
[2025-12-17 12:26:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:40:37]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:40:37] 2025-12-17 20:39:47,014 | INFO     | fitting pss+swap vs Time
[2025-12-17 15:40:37] 2025-12-17 20:39:47,015 | INFO     | sum of square deviations: 2027847386.6417177
[2025-12-17 15:40:37] 2025-12-17 20:39:47,016 | INFO     | sum of deviations: 69443513739.25137
[2025-12-17 15:40:37] 2025-12-17 20:39:47,016 | INFO     | mean x: 1765998245.475936
[2025-12-17 15:40:37] 2025-12-17 20:39:47,016 | INFO     | mean y: 2491689.278074866
[2025-12-17 15:40:37] 2025-12-17 20:39:47,016 | INFO     | intersect: -60474013708.053215
[2025-12-17 15:40:37] 2025-12-17 20:39:47,017 | INFO     | chi2: 2.928507503578838
[2025-12-17 15:40:37] 2025-12-17 20:39:47,017 | INFO     | sum of square deviations: 1869491777.802193
[2025-12-17 15:40:37] 2025-12-17 20:39:47,018 | INFO     | sum of deviations: 67593203495.274734
[2025-12-17 15:40:37] 2025-12-17 20:39:47,018 | INFO     | mean x: 1765998092.967033
[2025-12-17 15:40:37] 2025-12-17 20:39:47,019 | INFO     | mean y: 2489906.8791208793
[2025-12-17 15:40:37] 2025-12-17 20:39:47,019 | INFO     | intersect: -63848803737.49336
[2025-12-17 15:40:37] 2025-12-17 20:39:47,020 | INFO     | chi2: 2.927328715907618
[2025-12-17 15:40:37] 2025-12-17 20:39:47,020 | INFO     | current chi2=2.927328715907618 (change=0.040252164960465006 %)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,020 | INFO     | right removable region: 181
[2025-12-17 15:40:37] 2025-12-17 20:39:47,020 | INFO     | sum of square deviations: 1869493794.9505496
[2025-12-17 15:40:37] 2025-12-17 20:39:47,021 | INFO     | sum of deviations: 21757015864.02199
[2025-12-17 15:40:37] 2025-12-17 20:39:47,022 | INFO     | mean x: 1765998397.9835165
[2025-12-17 15:40:37] 2025-12-17 20:39:47,022 | INFO     | mean y: 2537408.340659341
[2025-12-17 15:40:37] 2025-12-17 20:39:47,022 | INFO     | intersect: -20550007491.537502
[2025-12-17 15:40:37] 2025-12-17 20:39:47,022 | INFO     | chi2: 0.36459893557788015
[2025-12-17 15:40:37] 2025-12-17 20:39:47,022 | INFO     | current chi2=0.36459893557788015 (change=87.55000848956969 %)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,022 | INFO     | sum of square deviations: 1719616458.214698
[2025-12-17 15:40:37] 2025-12-17 20:39:47,023 | INFO     | sum of deviations: 6567218445.3898325
[2025-12-17 15:40:37] 2025-12-17 20:39:47,024 | INFO     | mean x: 1765998550.4858756
[2025-12-17 15:40:37] 2025-12-17 20:39:47,024 | INFO     | mean y: 2552905.3559322036
[2025-12-17 15:40:37] 2025-12-17 20:39:47,024 | INFO     | intersect: -6741798836.498907
[2025-12-17 15:40:37] 2025-12-17 20:39:47,024 | INFO     | chi2: 0.13228177967047988
[2025-12-17 15:40:37] 2025-12-17 20:39:47,024 | INFO     | current chi2=0.13228177967047988 (change=63.718550230867635 %)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,025 | INFO     | sum of square deviations: 1577982752.9476755
[2025-12-17 15:40:37] 2025-12-17 20:39:47,026 | INFO     | sum of deviations: -3254138279.8081393
[2025-12-17 15:40:37] 2025-12-17 20:39:47,026 | INFO     | mean x: 1765998702.9825583
[2025-12-17 15:40:37] 2025-12-17 20:39:47,026 | INFO     | mean y: 2563426.0639534886
[2025-12-17 15:40:37] 2025-12-17 20:39:47,026 | INFO     | intersect: 3644430848.716086
[2025-12-17 15:40:37] 2025-12-17 20:39:47,026 | INFO     | chi2: 0.011787009432526505
[2025-12-17 15:40:37] 2025-12-17 20:39:47,026 | INFO     | current chi2=0.011787009432526505 (change=91.08946866160366 %)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,027 | INFO     | sum of square deviations: 1444317721.7485015
[2025-12-17 15:40:37] 2025-12-17 20:39:47,028 | INFO     | sum of deviations: -3456368593.2215643
[2025-12-17 15:40:37] 2025-12-17 20:39:47,028 | INFO     | mean x: 1765998855.497006
[2025-12-17 15:40:37] 2025-12-17 20:39:47,028 | INFO     | mean y: 2563653.5568862273
[2025-12-17 15:40:37] 2025-12-17 20:39:47,028 | INFO     | intersect: 4228741099.067699
[2025-12-17 15:40:37] 2025-12-17 20:39:47,028 | INFO     | chi2: 0.011459247775919787
[2025-12-17 15:40:37] 2025-12-17 20:39:47,028 | INFO     | current chi2=0.011459247775919787 (change=2.780702420600875 %)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,029 | INFO     | left removable region: 40
[2025-12-17 15:40:37] 2025-12-17 20:39:47,029 | INFO     | sum of square deviations: 869243015.0354642
[2025-12-17 15:40:37] 2025-12-17 20:39:47,029 | INFO     | sum of deviations: -249248918.21985802
[2025-12-17 15:40:37] 2025-12-17 20:39:47,030 | INFO     | mean x: 1765999282.5390072
[2025-12-17 15:40:37] 2025-12-17 20:39:47,030 | INFO     | mean y: 2559450.858156028
[2025-12-17 15:40:37] 2025-12-17 20:39:47,030 | INFO     | intersect: 508946506.1880563
[2025-12-17 15:40:37] 2025-12-17 20:39:47,030 | INFO     | chi2: 0.008601618907590817
[2025-12-17 15:40:37] 2025-12-17 20:39:47,030 | INFO     | current memory leak: -0.29 B/s (using 141 data points, chi2=0.01)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,031 | INFO     | could have reported an average CPU frequency of 2600 MHz (10 samples)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,031 | INFO     | ..............................
[2025-12-17 15:40:37] 2025-12-17 20:39:47,031 | INFO     | . Timing measurements:
[2025-12-17 15:40:37] 2025-12-17 20:39:47,032 | INFO     | . get job = 0 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,032 | INFO     | . initial setup = 5 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,032 | INFO     | . payload setup = 47 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,033 | INFO     | . stage-in = 0 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,033 | INFO     | . payload execution = 11423 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,033 | INFO     | . stage-out = 3 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,033 | INFO     | . log creation = 0 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,033 | INFO     | ..............................
[2025-12-17 15:40:37] 2025-12-17 20:39:47,545 | INFO     | 
[2025-12-17 15:40:37] 2025-12-17 20:39:47,545 | INFO     | job summary report
[2025-12-17 15:40:37] 2025-12-17 20:39:47,545 | INFO     | --------------------------------------------------
[2025-12-17 15:40:37] 2025-12-17 20:39:47,545 | INFO     | PanDA job id: 6932172747
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | task id: 47886831
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | errors: (none)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | pilot state: finished 
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | transexitcode: 0
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | exeerrorcode: 0
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | exeerrordiag: 
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | exitcode: 0
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | exitmsg: OK
[2025-12-17 15:40:37] 2025-12-17 20:39:47,546 | INFO     | cpuconsumptiontime: 51785 s
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | nevents: 400
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | neventsw: 0
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | pid: 343294
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | pgrp: 343294
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | corecount: 9
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | event service: False
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | sizes: {0: 2283111, 1: 2283796, 2: 2283995, 3: 2283995, 14: 2284023, 25: 2284051, 35: 2284469, 37: 2284497, 11475: 2313858, 11479: 2322856, 11482: 2322912, 11494: 
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | --------------------------------------------------
[2025-12-17 15:40:37] 2025-12-17 20:39:47,547 | INFO     | 
[2025-12-17 15:40:37] 2025-12-17 20:39:47,548 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-17 15:40:37] 2025-12-17 20:39:47,575 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 15:40:37] 2025-12-17 20:39:47,578 | INFO     | job 6932172747 has completed (purged errors)
[2025-12-17 15:40:37] 2025-12-17 20:39:47,578 | INFO     | overall cleanup function is called
[2025-12-17 15:40:37] 2025-12-17 20:39:48,587 | INFO     | --- collectZombieJob: --- 10, [343294]
[2025-12-17 15:40:37] 2025-12-17 20:39:48,587 | INFO     | zombie collector waiting for pid 343294
[2025-12-17 15:40:37] 2025-12-17 20:39:48,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 15:40:37] 2025-12-17 20:39:48,588 | INFO     | collected zombie processes
[2025-12-17 15:40:37] 2025-12-17 20:39:48,588 | INFO     | will attempt to kill all subprocesses of pid=343294
[2025-12-17 15:40:37] 2025-12-17 20:39:48,859 | INFO     | process IDs to be killed: [343294] (in reverse order)
[2025-12-17 15:40:37] 2025-12-17 20:39:48,981 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 15:40:37] 2025-12-17 20:39:48,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 15:40:37] 2025-12-17 20:39:48,990 | INFO     | did not find any defunct processes belonging to 343294
[2025-12-17 15:40:37] 2025-12-17 20:39:48,998 | INFO     | did not find any defunct processes belonging to 343294
[2025-12-17 15:40:37] 2025-12-17 20:39:48,999 | INFO     | ready for new job
[2025-12-17 15:40:37] 2025-12-17 20:39:48,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 15:40:37] 2025-12-17 20:39:49,001 | INFO     | ***************************************
[2025-12-17 15:40:37] 2025-12-17 20:39:49,001 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 15:40:37] 2025-12-17 20:39:49,001 | INFO     | ***************************************
[2025-12-17 15:40:37] 2025-12-17 20:39:49,002 | INFO     | 
[2025-12-17 15:40:37] 2025-12-17 20:39:49,004 | INFO     | architecture information:
[2025-12-17 15:40:37] 2025-12-17 20:39:49,004 | INFO     | executing command: cat /etc/os-release
[2025-12-17 15:40:37] 2025-12-17 20:39:49,039 | INFO     | cat /etc/os-release:
[2025-12-17 15:40:37] NAME="CentOS Linux"
[2025-12-17 15:40:37] VERSION="7 (Core)"
[2025-12-17 15:40:37] ID="centos"
[2025-12-17 15:40:37] ID_LIKE="rhel fedora"
[2025-12-17 15:40:37] VERSION_ID="7"
[2025-12-17 15:40:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 15:40:37] ANSI_COLOR="0;31"
[2025-12-17 15:40:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 15:40:37] HOME_URL="https://www.centos.org/"
[2025-12-17 15:40:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 15:40:37] 
[2025-12-17 15:40:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 15:40:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 15:40:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 15:40:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 15:40:37] 
[2025-12-17 15:40:37] 2025-12-17 20:39:49,039 | INFO     | ***************************************
[2025-12-17 15:40:37] 2025-12-17 20:39:49,543 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-17 15:40:37] 2025-12-17 20:39:49,607 | INFO     | sufficient remaining disk space (53302263808 B)
[2025-12-17 15:40:37] 2025-12-17 20:39:49,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 15:40:37] 2025-12-17 20:39:49,608 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 15:40:37] 2025-12-17 20:39:49,608 | INFO     | update_server=False
[2025-12-17 15:40:37] 2025-12-17 20:39:49,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 15:40:37] 2025-12-17 20:39:49,648 | INFO     | all payload control threads have been joined
[2025-12-17 15:40:37] 2025-12-17 20:39:49,886 | INFO     | all job control threads have been joined
[2025-12-17 15:40:37] 2025-12-17 20:39:50,064 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 15:40:37] 2025-12-17 20:39:50,065 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 15:40:37] 2025-12-17 20:39:50,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:40:37] 2025-12-17 20:39:50,065 | INFO     | will abort loop
[2025-12-17 15:40:37] 2025-12-17 20:39:50,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 15:40:37] 2025-12-17 20:39:50,478 | INFO     | all data control threads have been joined
[2025-12-17 15:40:37] 2025-12-17 20:39:50,614 | INFO     | [job] retrieve thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:50,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 15:40:37] 2025-12-17 20:39:50,659 | INFO     | [payload] control thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:50,792 | INFO     | [payload] failed_post thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:50,892 | INFO     | [job] control thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,069 | INFO     | [job] job monitor thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,085 | INFO     | [job] validate thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,339 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,484 | INFO     | [data] control thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,572 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,610 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,806 | INFO     | [payload] validate_post thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:51,880 | INFO     | [data] copytool_in thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:52,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:40:37] 2025-12-17 20:39:52,640 | INFO     | [data] copytool_out thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:53,165 | INFO     | [job] queue monitor thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:54,389 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:39:59,843 | INFO     | job.realtimelogging is not enabled
[2025-12-17 15:40:37] 2025-12-17 20:40:00,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:40:37] 2025-12-17 20:40:19,255 | INFO     | PID=336647 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 15:40:37] 2025-12-17 20:40:19,256 | INFO     | .. there are 7 such processes running
[2025-12-17 15:40:37] 2025-12-17 20:40:19,256 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:40:37] 2025-12-17 20:40:19,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:40:37] 2025-12-17 20:40:19,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:40:37] 2025-12-17 20:40:29,589 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:40:37] 2025-12-17 20:40:31,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276739344192)>', '<ExcThread(monitor, started 140276106520320)>']
[2025-12-17 15:40:37] 2025-12-17 20:40:32,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:40:37] 2025-12-17 20:40:32,336 | INFO     | [monitor] control thread has ended
[2025-12-17 15:40:37] 2025-12-17 20:40:36,703 | INFO     | all workflow threads have been joined
[2025-12-17 15:40:37] 2025-12-17 20:40:36,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:40:37] 2025-12-17 20:40:36,704 | INFO     | traces error code: 0
[2025-12-17 15:40:37] 2025-12-17 20:40:36,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:40:37] 2025-12-17 20:40:36,884 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:40:37] 2025-12-17 20:40:36,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:40:37] 2025-12-17 20:40:36,943 [wrapper] pilotpid: 336647
[2025-12-17 15:40:37] 2025-12-17 20:40:36,950 [wrapper] Pilot exit status: 0
[2025-12-17 15:40:37] 2025-12-17 20:40:36,995 [wrapper] pandaids: 6932172747
[2025-12-17 15:40:37] 2025-12-17 20:40:37,042 [wrapper] cleanup supervisor_pilot  583269 336648
[2025-12-17 15:40:37] 2025-12-17 20:40:37,046 [wrapper] Test setup, not cleaning
[2025-12-17 15:40:37] 2025-12-17 20:40:37,058 [wrapper] apfmon messages muted
[2025-12-17 15:40:37] 2025-12-17 20:40:37,079 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:40:37] 2025-12-17 20:40:37,113 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:40:37]  *** Error codes and diagnostics ***
[2025-12-17 15:40:37]     "exeErrorCode": 0,
[2025-12-17 15:40:37]     "exeErrorDiag": "",
[2025-12-17 15:40:37]     "pilotErrorCode": 0,
[2025-12-17 15:40:37]     "pilotErrorDiag": "",
[2025-12-17 15:40:37]  *** Listing of results directory ***
[2025-12-17 15:40:37] total 337844
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 00:30 queuedata.json
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 00:30 pilot3.tar.gz
[2025-12-17 15:40:37] -rwx------. 1 boincer umatlas     36322 Dec 17 00:30 runpilot2-wrapper.sh
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas       100 Dec 17 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:40:37] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 12:25 run_atlas
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas       105 Dec 17 12:25 job.xml
[2025-12-17 15:40:37] -rw-r--r--. 2 boincer umatlas 194258068 Dec 17 12:25 EVNT.47886829._000260.pool.root.1
[2025-12-17 15:40:37] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 12:25 start_atlas.sh
[2025-12-17 15:40:37] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 12:25 shared
[2025-12-17 15:40:37] -rw-r--r--. 2 boincer umatlas    592415 Dec 17 12:25 input.tar.gz
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas         0 Dec 17 12:25 boinc_lockfile
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas      2537 Dec 17 12:26 pandaJob.out
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas        57 Dec 17 12:26 setup.sh.local
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas    987432 Dec 17 12:27 agis_schedconf.cvmfs.json
[2025-12-17 15:40:37] drwx------. 5 boincer umatlas      4096 Dec 17 12:27 pilot3
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas      6660 Dec 17 15:37 init_data.xml
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas 143724403 Dec 17 15:38 HITS.47886831._017142.pool.root.1
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas       530 Dec 17 15:38 boinc_task_state.xml
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas      1043 Dec 17 15:39 memory_monitor_summary.json
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas   1516240 Dec 17 15:39 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas    439928 Dec 17 15:39 log.47886831._017142.job.log.tgz.1
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas        95 Dec 17 15:39 pilot_heartbeat.json
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas      7825 Dec 17 15:39 heartbeat.json
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas        28 Dec 17 15:40 wrapper_checkpoint.txt
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas      5080 Dec 17 15:40 pilotlog.txt
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 15:40 boinc_mmap_file
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas   1586933 Dec 17 15:40 log.47886831._017142.job.log.1
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas       357 Dec 17 15:40 output.list
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas       620 Dec 17 15:40 runtime_log
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas   2048000 Dec 17 15:40 result.tar.gz
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas      9343 Dec 17 15:40 runtime_log.err
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas       655 Dec 17 15:40 prkLDmSIzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQPbKDm1XiAAn.diag
[2025-12-17 15:40:37] -rw-r--r--. 1 boincer umatlas     21072 Dec 17 15:40 stderr.txt
[2025-12-17 15:40:37] HITS file was successfully produced:
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas 143724403 Dec 17 15:38 shared/HITS.pool.root.1
[2025-12-17 15:40:37]  *** Contents of shared directory: ***
[2025-12-17 15:40:37] total 332664
[2025-12-17 15:40:37] -rw-r--r--. 2 boincer umatlas 194258068 Dec 17 12:25 ATLAS.root_0
[2025-12-17 15:40:37] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 12:25 start_atlas.sh
[2025-12-17 15:40:37] -rw-r--r--. 2 boincer umatlas    592415 Dec 17 12:25 input.tar.gz
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas 143724403 Dec 17 15:38 HITS.pool.root.1
[2025-12-17 15:40:37] -rw-------. 1 boincer umatlas   2048000 Dec 17 15:40 result.tar.gz
15:40:39 (331522): run_atlas exited; CPU time 52012.419521
15:40:39 (331522): called boinc_finish(0)

</stderr_txt>
]]>

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