Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:18:13 (278080): wrapper (7.7.26015): starting
11:18:13 (278080): wrapper: running run_atlas (--nthreads 10)
[2025-12-17 11:18:13] Arguments: --nthreads 10
[2025-12-17 11:18:13] Threads: 10
[2025-12-17 11:18:13] Checking for CVMFS
[2025-12-17 11:18:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 11:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 11:18:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 11:18:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 11:18:15] 2.13.3.0 14106 60471 242944 154112 0 1222 39389637 40960001 31551 16776704 0 819138348 99.724 595952907 47074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 11:18:15] CVMFS is ok
[2025-12-17 11:18:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 11:18:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 11:18:15] Further information can be found at the LHC@home message board.
[2025-12-17 11:18:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 11:18:15] Checking for apptainer binary...
[2025-12-17 11:18:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 11:18:15] Running /usr/bin/apptainer --version
[2025-12-17 11:18:15] apptainer version 1.4.5-2.el9
[2025-12-17 11:18:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 11:18:16] c8-7-5.aglt2.org
[2025-12-17 11:18:16] apptainer works
[2025-12-17 11:18:16] Set ATHENA_PROC_NUMBER=10
[2025-12-17 11:18:16] Set ATHENA_CORE_NUMBER=10
[2025-12-17 11:18:16] Starting ATLAS job with PandaID=6931734164
[2025-12-17 11:18:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 12:38:40]  *** The last 200 lines of the pilot log: ***
[2025-12-17 12:38:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/f2/log.47886933._007912.job.log.tgz.1
[2025-12-17 12:38:40]  workdir=None
[2025-12-17 12:38:40] ]
[2025-12-17 12:38:40] 2025-12-17 17:37:53,793 | INFO     | time since job start (4706s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:37:53,805 | INFO     | transferring file log.47886933._007912.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6931734164/log.47886933._007912.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-17 12:38:40] 2025-12-17 17:37:53,805 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6931734164/log.47886933._007912.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886933._007912.job
[2025-12-17 12:38:40] 2025-12-17 17:37:53,819 | INFO     | adding to output.list: log.47886933._007912.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/f2/log.47886933._007912.job.log.tg
[2025-12-17 12:38:40] 2025-12-17 17:37:53,819 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 12:38:40] 2025-12-17 17:37:53,819 | INFO     | summary of transferred files:
[2025-12-17 12:38:40] 2025-12-17 17:37:53,819 | INFO     |  -- lfn=log.47886933._007912.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 12:38:40] 2025-12-17 17:37:53,820 | INFO     | stage-out finished correctly
[2025-12-17 12:38:40] 2025-12-17 17:37:54,935 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 12:38:40] 2025-12-17 17:37:55,744 | INFO     | job 6931734164 has state=finished
[2025-12-17 12:38:40] 2025-12-17 17:37:55,744 | INFO     | preparing for final server update for job 6931734164 in state='finished'
[2025-12-17 12:38:40] 2025-12-17 17:37:55,744 | INFO     | this job has now completed (state=finished)
[2025-12-17 12:38:40] 2025-12-17 17:37:55,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 12:38:40] 2025-12-17 17:37:55,744 | INFO     | log transfer has been attempted: DONE
[2025-12-17 12:38:40] 2025-12-17 17:37:55,744 | INFO     | job 6931734164 has finished - writing final server update
[2025-12-17 12:38:40] 2025-12-17 17:37:55,745 | INFO     | total number of processed events: 400 (read)
[2025-12-17 12:38:40] 2025-12-17 17:37:55,757 | INFO     | executing command: lscpu
[2025-12-17 12:38:40] 2025-12-17 17:37:55,800 | INFO     | time since job start (4708s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:37:55,886 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 12:38:40] 2025-12-17 17:37:56,242 | INFO     | monitor loop #313: job 0:6931734164 is in state 'finished'
[2025-12-17 12:38:40] 2025-12-17 17:37:56,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:38:40] 2025-12-17 17:37:57,807 | INFO     | time since job start (4710s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:37:58,747 | INFO     | monitor loop #314: job 0:6931734164 is in state 'finished'
[2025-12-17 12:38:40] 2025-12-17 17:37:58,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:38:40] 2025-12-17 17:37:59,814 | INFO     | time since job start (4712s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:38:01,252 | INFO     | monitor loop #315: job 0:6931734164 is in state 'finished'
[2025-12-17 12:38:40] 2025-12-17 17:38:01,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:38:40] 2025-12-17 17:38:01,821 | INFO     | time since job start (4714s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:38:03,757 | INFO     | monitor loop #316: job 0:6931734164 is in state 'finished'
[2025-12-17 12:38:40] 2025-12-17 17:38:03,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:38:40] 2025-12-17 17:38:03,828 | INFO     | time since job start (4716s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:38:05,837 | INFO     | time since job start (4718s) is within the limit (174528.0s)
[2025-12-17 12:38:40] 2025-12-17 17:38:06,270 | INFO     | monitor loop #317: job 0:6931734164 is in state 'finished'
[2025-12-17 12:38:40] 2025-12-17 17:38:06,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,417 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 12:38:40] 2025-12-17 17:38:07,426 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9817187499993
[2025-12-17 12:38:40] 2025-12-17 17:38:07,439 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931734164/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,439 | INFO     | extracted standard info from prmon json
[2025-12-17 12:38:40] 2025-12-17 17:38:07,439 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 12:38:40] 2025-12-17 17:38:07,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 12:38:40] 2025-12-17 17:38:07,440 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 12:38:40] 2025-12-17 17:38:07,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 12:38:40] 2025-12-17 17:38:07,441 | INFO     | fitting pss+swap vs Time
[2025-12-17 12:38:40] 2025-12-17 17:38:07,441 | INFO     | sum of square deviations: 97480074.98529397
[2025-12-17 12:38:40] 2025-12-17 17:38:07,441 | INFO     | sum of deviations: -380986819.6029412
[2025-12-17 12:38:40] 2025-12-17 17:38:07,441 | INFO     | mean x: 1765990849.514706
[2025-12-17 12:38:40] 2025-12-17 17:38:07,441 | INFO     | mean y: 2611472.1029411764
[2025-12-17 12:38:40] 2025-12-17 17:38:07,441 | INFO     | intersect: 6904732108.6125765
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | chi2: 0.02900835576829604
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | current memory leak: -3.91 B/s (using 68 data points, chi2=0.03)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | ..............................
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . Timing measurements:
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . get job = 0 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . initial setup = 4 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . payload setup = 40 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . stage-in = 0 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . payload execution = 4596 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . stage-out = 0 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | . log creation = 0 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,442 | INFO     | ..............................
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | 
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | job summary report
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | --------------------------------------------------
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | PanDA job id: 6931734164
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | task id: 47886933
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | errors: (none)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | pilot state: finished 
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | transexitcode: 0
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | exeerrorcode: 0
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | exeerrordiag: 
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | exitcode: 0
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | exitmsg: OK
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | cpuconsumptiontime: 23907 s
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | nevents: 400
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | neventsw: 0
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | pid: 334238
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | pgrp: 334238
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | corecount: 10
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | event service: False
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | sizes: {0: 2283965, 11: 2283965, 22: 2283993, 29: 2284283, 33: 2284311, 4641: 2310619, 4643: 2319617, 4644: 2319673, 4657: 2319867}
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | --------------------------------------------------
[2025-12-17 12:38:40] 2025-12-17 17:38:07,507 | INFO     | 
[2025-12-17 12:38:40] 2025-12-17 17:38:07,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 12:38:40] 2025-12-17 17:38:07,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | job 6931734164 has completed (purged errors)
[2025-12-17 12:38:40] 2025-12-17 17:38:07,536 | INFO     | overall cleanup function is called
[2025-12-17 12:38:40] 2025-12-17 17:38:08,544 | INFO     | --- collectZombieJob: --- 10, [334238]
[2025-12-17 12:38:40] 2025-12-17 17:38:08,544 | INFO     | zombie collector waiting for pid 334238
[2025-12-17 12:38:40] 2025-12-17 17:38:08,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 12:38:40] 2025-12-17 17:38:08,544 | INFO     | collected zombie processes
[2025-12-17 12:38:40] 2025-12-17 17:38:08,544 | INFO     | will attempt to kill all subprocesses of pid=334238
[2025-12-17 12:38:40] 2025-12-17 17:38:09,045 | INFO     | process IDs to be killed: [334238] (in reverse order)
[2025-12-17 12:38:40] 2025-12-17 17:38:09,252 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 12:38:40] 2025-12-17 17:38:09,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 12:38:40] 2025-12-17 17:38:09,324 | INFO     | did not find any defunct processes belonging to 334238
[2025-12-17 12:38:40] 2025-12-17 17:38:09,351 | INFO     | did not find any defunct processes belonging to 334238
[2025-12-17 12:38:40] 2025-12-17 17:38:09,352 | INFO     | ready for new job
[2025-12-17 12:38:40] 2025-12-17 17:38:09,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 12:38:40] 2025-12-17 17:38:09,353 | INFO     | ***************************************
[2025-12-17 12:38:40] 2025-12-17 17:38:09,353 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 12:38:40] 2025-12-17 17:38:09,353 | INFO     | ***************************************
[2025-12-17 12:38:40] 2025-12-17 17:38:09,353 | INFO     | 
[2025-12-17 12:38:40] 2025-12-17 17:38:09,358 | INFO     | architecture information:
[2025-12-17 12:38:40] 2025-12-17 17:38:09,358 | INFO     | executing command: cat /etc/os-release
[2025-12-17 12:38:40] 2025-12-17 17:38:09,372 | INFO     | cat /etc/os-release:
[2025-12-17 12:38:40] NAME="CentOS Linux"
[2025-12-17 12:38:40] VERSION="7 (Core)"
[2025-12-17 12:38:40] ID="centos"
[2025-12-17 12:38:40] ID_LIKE="rhel fedora"
[2025-12-17 12:38:40] VERSION_ID="7"
[2025-12-17 12:38:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 12:38:40] ANSI_COLOR="0;31"
[2025-12-17 12:38:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 12:38:40] HOME_URL="https://www.centos.org/"
[2025-12-17 12:38:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 12:38:40] 
[2025-12-17 12:38:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 12:38:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 12:38:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 12:38:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 12:38:40] 
[2025-12-17 12:38:40] 2025-12-17 17:38:09,372 | INFO     | ***************************************
[2025-12-17 12:38:40] 2025-12-17 17:38:09,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 12:38:40] 2025-12-17 17:38:10,107 | INFO     | sufficient remaining disk space (170233167872 B)
[2025-12-17 12:38:40] 2025-12-17 17:38:10,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 12:38:40] 2025-12-17 17:38:10,107 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 12:38:40] 2025-12-17 17:38:10,108 | INFO     | update_server=False
[2025-12-17 12:38:40] 2025-12-17 17:38:10,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 12:38:40] 2025-12-17 17:38:10,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 12:38:40] 2025-12-17 17:38:10,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 12:38:40] 2025-12-17 17:38:10,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:38:40] 2025-12-17 17:38:10,109 | INFO     | aborting loop
[2025-12-17 12:38:40] 2025-12-17 17:38:10,371 | INFO     | all job control threads have been joined
[2025-12-17 12:38:40] 2025-12-17 17:38:11,099 | INFO     | all data control threads have been joined
[2025-12-17 12:38:40] 2025-12-17 17:38:11,115 | INFO     | [job] job monitor thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:11,116 | INFO     | [job] retrieve thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:11,377 | INFO     | [job] control thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:11,411 | INFO     | all payload control threads have been joined
[2025-12-17 12:38:40] 2025-12-17 17:38:11,656 | INFO     | [payload] failed_post thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:11,773 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,030 | INFO     | [job] validate thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,045 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,105 | INFO     | [data] control thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,115 | INFO     | [data] copytool_out thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,277 | INFO     | [data] copytool_in thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,390 | INFO     | [payload] validate_post thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,416 | INFO     | [payload] control thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:12,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:38:40] 2025-12-17 17:38:12,605 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:13,527 | INFO     | [job] queue monitor thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:14,117 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:20,777 | INFO     | job.realtimelogging is not enabled
[2025-12-17 12:38:40] 2025-12-17 17:38:21,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 12:38:40] 2025-12-17 17:38:34,870 | INFO     | [monitor] cgroup control has ended
[2025-12-17 12:38:40] 2025-12-17 17:38:34,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140875966272)>', '<ExcThread(monitor, started 140140378826496)>']
[2025-12-17 12:38:40] 2025-12-17 17:38:39,485 | INFO     | PID=297042 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 12:38:40] 2025-12-17 17:38:39,485 | INFO     | .. there are 40 such processes running
[2025-12-17 12:38:40] 2025-12-17 17:38:39,486 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 12:38:40] 2025-12-17 17:38:39,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 12:38:40] 2025-12-17 17:38:39,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 12:38:40] 2025-12-17 17:38:39,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 12:38:40] 2025-12-17 17:38:39,486 | INFO     | [monitor] control thread has ended
[2025-12-17 12:38:40] 2025-12-17 17:38:40,017 | INFO     | all workflow threads have been joined
[2025-12-17 12:38:40] 2025-12-17 17:38:40,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 12:38:40] 2025-12-17 17:38:40,017 | INFO     | traces error code: 0
[2025-12-17 12:38:40] 2025-12-17 17:38:40,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 12:38:40] 2025-12-17 17:38:40,316 [wrapper] ==== pilot stdout END ====
[2025-12-17 12:38:40] 2025-12-17 17:38:40,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 12:38:40] 2025-12-17 17:38:40,324 [wrapper] pilotpid: 297042
[2025-12-17 12:38:40] 2025-12-17 17:38:40,326 [wrapper] Pilot exit status: 0
[2025-12-17 12:38:40] 2025-12-17 17:38:40,366 [wrapper] pandaids: 6931734164
[2025-12-17 12:38:40] 2025-12-17 17:38:40,544 [wrapper] cleanup supervisor_pilot  986775 297043
[2025-12-17 12:38:40] 2025-12-17 17:38:40,547 [wrapper] Test setup, not cleaning
[2025-12-17 12:38:40] 2025-12-17 17:38:40,550 [wrapper] apfmon messages muted
[2025-12-17 12:38:40] 2025-12-17 17:38:40,553 [wrapper] ==== wrapper stdout END ====
[2025-12-17 12:38:40] 2025-12-17 17:38:40,555 [wrapper] ==== wrapper stderr END ====
[2025-12-17 12:38:40]  *** Error codes and diagnostics ***
[2025-12-17 12:38:40]     "exeErrorCode": 0,
[2025-12-17 12:38:40]     "exeErrorDiag": "",
[2025-12-17 12:38:40]     "pilotErrorCode": 0,
[2025-12-17 12:38:40]     "pilotErrorDiag": "",
[2025-12-17 12:38:40]  *** Listing of results directory ***
[2025-12-17 12:38:40] total 340920
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 12:38:40] -rwx------. 1 boincer umatlas     36322 Dec 16 17:39 runpilot2-wrapper.sh
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 17:43 queuedata.json
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas       100 Dec 17 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 12:38:40] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 11:18 run_atlas
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas       105 Dec 17 11:18 job.xml
[2025-12-17 12:38:40] -rw-r--r--. 2 boincer umatlas 195089390 Dec 17 11:18 EVNT.47886929._000323.pool.root.1
[2025-12-17 12:38:40] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 11:18 start_atlas.sh
[2025-12-17 12:38:40] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 11:18 shared
[2025-12-17 12:38:40] -rw-r--r--. 2 boincer umatlas    592398 Dec 17 11:18 input.tar.gz
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas         0 Dec 17 11:18 boinc_lockfile
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas      2513 Dec 17 11:18 pandaJob.out
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas        57 Dec 17 11:18 setup.sh.local
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas    987423 Dec 17 11:19 agis_schedconf.cvmfs.json
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas   1516240 Dec 17 11:19 agis_ddmendpoints.agis.ALL.json
[2025-12-17 12:38:40] drwx------. 5 boincer umatlas      4096 Dec 17 11:19 pilot3
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas 148085435 Dec 17 12:37 HITS.47886933._007912.pool.root.1
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas       530 Dec 17 12:37 boinc_task_state.xml
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas      1036 Dec 17 12:37 memory_monitor_summary.json
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas    364212 Dec 17 12:37 log.47886933._007912.job.log.tgz.1
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas      7774 Dec 17 12:38 heartbeat.json
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas      7172 Dec 17 12:38 init_data.xml
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 12:38 boinc_mmap_file
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas        27 Dec 17 12:38 wrapper_checkpoint.txt
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas        95 Dec 17 12:38 pilot_heartbeat.json
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas      4896 Dec 17 12:38 pilotlog.txt
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas    642434 Dec 17 12:38 log.47886933._007912.job.log.1
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas       357 Dec 17 12:38 output.list
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas       620 Dec 17 12:38 runtime_log
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas   1024000 Dec 17 12:38 result.tar.gz
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas      9334 Dec 17 12:38 runtime_log.err
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas       650 Dec 17 12:38 h8IKDmDtsp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIzaKDmYWSpKm.diag
[2025-12-17 12:38:40] -rw-r--r--. 1 boincer umatlas     22377 Dec 17 12:38 stderr.txt
[2025-12-17 12:38:40] HITS file was successfully produced:
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas 148085435 Dec 17 12:37 shared/HITS.pool.root.1
[2025-12-17 12:38:40]  *** Contents of shared directory: ***
[2025-12-17 12:38:40] total 336740
[2025-12-17 12:38:40] -rw-r--r--. 2 boincer umatlas 195089390 Dec 17 11:18 ATLAS.root_0
[2025-12-17 12:38:40] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 11:18 start_atlas.sh
[2025-12-17 12:38:40] -rw-r--r--. 2 boincer umatlas    592398 Dec 17 11:18 input.tar.gz
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas 148085435 Dec 17 12:37 HITS.pool.root.1
[2025-12-17 12:38:40] -rw-------. 1 boincer umatlas   1024000 Dec 17 12:38 result.tar.gz
12:38:42 (278080): run_atlas exited; CPU time 24050.487156
12:38:42 (278080): called boinc_finish(0)

</stderr_txt>
]]>

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