Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:19:20 (478284): wrapper (7.7.26015): starting
03:19:20 (478284): wrapper: running run_atlas (--nthreads 4)
[2025-12-18 03:19:20] Arguments: --nthreads 4
[2025-12-18 03:19:20] Threads: 4
[2025-12-18 03:19:20] Checking for CVMFS
[2025-12-18 03:19:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-18 03:19:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-18 03:19:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-18 03:19:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-18 03:19:20] 2.9.2.0 2605775 6755 98244 154130 0 56 19577835 36864001 0 130560 0 5416637 99.991 241455 8715 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-18 03:19:20] CVMFS is ok
[2025-12-18 03:19:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-18 03:19:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-18 03:19:20] Further information can be found at the LHC@home message board.
[2025-12-18 03:19:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-18 03:19:20] Checking for apptainer binary...
[2025-12-18 03:19:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-18 03:19:20] Running /usr/bin/apptainer --version
[2025-12-18 03:19:20] apptainer version 1.4.1-1.1
[2025-12-18 03:19:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-18 03:19:20] thA334
[2025-12-18 03:19:20] apptainer works
[2025-12-18 03:19:21] Set ATHENA_PROC_NUMBER=4
[2025-12-18 03:19:21] Set ATHENA_CORE_NUMBER=4
[2025-12-18 03:19:22] Starting ATLAS job with PandaID=6932080333
[2025-12-18 03:19:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 04:58:41]  *** The last 200 lines of the pilot log: ***
[2025-12-18 04:58:41] 2025-12-18 03:57:44,914 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 04:58:41] 2025-12-18 03:57:44,914 | INFO     | update_server=False
[2025-12-18 04:58:41] 2025-12-18 03:57:44,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 04:58:41] 2025-12-18 03:57:44,914 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-18 04:58:41] 2025-12-18 03:57:44,914 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 04:58:41] 2025-12-18 03:57:44,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 04:58:41] 2025-12-18 03:57:44,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 04:58:41] 2025-12-18 03:57:44,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 04:58:41] 2025-12-18 03:57:45,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 04:58:41] 2025-12-18 03:57:45,103 | INFO     | aborting loop
[2025-12-18 04:58:41] 2025-12-18 03:57:45,261 | INFO     | all payload control threads have been joined
[2025-12-18 04:58:41] 2025-12-18 03:57:45,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 04:58:41] 2025-12-18 03:57:45,563 | INFO     | all data control threads have been joined
[2025-12-18 04:58:41] 2025-12-18 03:57:45,920 | INFO     | [job] retrieve thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:45,921 | INFO     | [job] queue monitor thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:46,003 | INFO     | all job control threads have been joined
[2025-12-18 04:58:41] 2025-12-18 03:57:46,108 | INFO     | [job] job monitor thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:46,267 | INFO     | [payload] control thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:46,370 | INFO     | [payload] validate_post thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:46,568 | INFO     | [data] control thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:46,664 | INFO     | [payload] failed_post thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:46,966 | INFO     | [job] validate thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,009 | INFO     | [job] control thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,157 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,157 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,197 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,383 | INFO     | [data] copytool_out thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,411 | INFO     | [data] copytool_in thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:47,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 04:58:41] 2025-12-18 03:57:51,524 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:57:55,325 | INFO     | job.realtimelogging is not enabled
[2025-12-18 04:58:41] 2025-12-18 03:57:56,330 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 04:58:41] 2025-12-18 03:58:36,129 | INFO     | [monitor] cgroup control has ended
[2025-12-18 04:58:41] 2025-12-18 03:58:36,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935097378624)>', '<ExcThread(monitor, started 139933792597760)>']
[2025-12-18 04:58:41] 2025-12-18 03:58:37,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 04:58:41] 2025-12-18 03:58:37,190 | INFO     | [monitor] control thread has ended
[2025-12-18 04:58:41] 2025-12-18 03:58:41,527 | INFO     | all workflow threads have been joined
[2025-12-18 04:58:41] 2025-12-18 03:58:41,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 04:58:41] 2025-12-18 03:58:41,528 | INFO     | traces error code: 0
[2025-12-18 04:58:41] 2025-12-18 03:58:41,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 04:58:41] 2025-12-18 03:58:41,597 [wrapper] ==== pilot stdout END ====
[2025-12-18 04:58:41] 2025-12-18 03:58:41,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 04:58:41] 2025-12-18 03:58:41,604 [wrapper] pilotpid: 482072
[2025-12-18 04:58:41] 2025-12-18 03:58:41,607 [wrapper] Pilot exit status: 0
[2025-12-18 04:58:41] 2025-12-18 03:58:41,618 [wrapper] pandaids: 6932080333
[2025-12-18 04:58:41] 2025-12-18 03:58:41,640 [wrapper] cleanup supervisor_pilot  501172 482073
[2025-12-18 04:58:41] 2025-12-18 03:58:41,643 [wrapper] Test setup, not cleaning
[2025-12-18 04:58:41] 2025-12-18 03:58:41,647 [wrapper] apfmon messages muted
[2025-12-18 04:58:41] 2025-12-18 03:58:41,650 [wrapper] ==== wrapper stdout END ====
[2025-12-18 04:58:41] 2025-12-18 03:58:41,654 [wrapper] ==== wrapper stderr END ====
[2025-12-18 04:58:41]  *** Error codes and diagnostics ***
[2025-12-18 04:58:41]     "exeErrorCode": 0,
[2025-12-18 04:58:41]     "exeErrorDiag": "",
[2025-12-18 04:58:41]     "pilotErrorCode": 0,
[2025-12-18 04:58:41]     "pilotErrorDiag": "",
[2025-12-18 04:58:41]  *** Listing of results directory ***
[2025-12-18 04:58:41] total 405348
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc    579449 Dec 17 04:48 pilot3.tar.gz
[2025-12-18 04:58:41] -rwx------ 1 boinc boinc     36322 Dec 17 04:49 runpilot2-wrapper.sh
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc      5112 Dec 17 04:50 queuedata.json
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc       100 Dec 18 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 04:58:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 18 03:19 run_atlas
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc       105 Dec 18 03:19 job.xml
[2025-12-18 04:58:41] -rw-r--r-- 2 boinc boinc 199344746 Dec 18 03:19 EVNT.47905888._000020.pool.root.1
[2025-12-18 04:58:41] -rw-r--r-- 2 boinc boinc    592380 Dec 18 03:19 input.tar.gz
[2025-12-18 04:58:41] -rw-r--r-- 2 boinc boinc     15847 Dec 18 03:19 start_atlas.sh
[2025-12-18 04:58:41] drwxrwx--x 2 boinc boinc      4096 Dec 18 03:19 shared
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc         0 Dec 18 03:19 boinc_setup_complete
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc      6368 Dec 18 03:19 init_data.xml
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc         0 Dec 18 03:19 boinc_lockfile
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc      2445 Dec 18 03:19 pandaJob.out
[2025-12-18 04:58:41] -rw------- 1 boinc boinc    988110 Dec 18 03:19 agis_schedconf.cvmfs.json
[2025-12-18 04:58:41] -rw------- 1 boinc boinc   1516240 Dec 18 03:19 agis_ddmendpoints.agis.ALL.json
[2025-12-18 04:58:41] drwx------ 5 boinc boinc      4096 Dec 18 03:19 pilot3
[2025-12-18 04:58:41] -rw------- 1 boinc boinc        95 Dec 18 04:56 pilot_heartbeat.json
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc       529 Dec 18 04:57 boinc_task_state.xml
[2025-12-18 04:58:41] -rw------- 1 boinc boinc 209536630 Dec 18 04:57 HITS.47905890._000545.pool.root.1
[2025-12-18 04:58:41] -rw------- 1 boinc boinc      1035 Dec 18 04:57 memory_monitor_summary.json
[2025-12-18 04:58:41] -rw------- 1 boinc boinc    291657 Dec 18 04:57 log.47905890._000545.job.log.tgz.1
[2025-12-18 04:58:41] -rw------- 1 boinc boinc      7758 Dec 18 04:57 heartbeat.json
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc      8192 Dec 18 04:58 boinc_mmap_file
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc        27 Dec 18 04:58 wrapper_checkpoint.txt
[2025-12-18 04:58:41] -rw------- 1 boinc boinc      4628 Dec 18 04:58 pilotlog.txt
[2025-12-18 04:58:41] -rw------- 1 boinc boinc    854675 Dec 18 04:58 log.47905890._000545.job.log.1
[2025-12-18 04:58:41] -rw------- 1 boinc boinc       357 Dec 18 04:58 output.list
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc       620 Dec 18 04:58 runtime_log
[2025-12-18 04:58:41] -rw------- 1 boinc boinc   1167360 Dec 18 04:58 result.tar.gz
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc      8897 Dec 18 04:58 runtime_log.err
[2025-12-18 04:58:41] -rw------- 1 boinc boinc       659 Dec 18 04:58 U7ELDm4ixp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4IbKDmAYbtGo.diag
[2025-12-18 04:58:41] -rw-r--r-- 1 boinc boinc      7530 Dec 18 04:58 stderr.txt
[2025-12-18 04:58:41] HITS file was successfully produced:
[2025-12-18 04:58:41] -rw------- 1 boinc boinc 209536630 Dec 18 04:57 shared/HITS.pool.root.1
[2025-12-18 04:58:41]  *** Contents of shared directory: ***
[2025-12-18 04:58:41] total 401048
[2025-12-18 04:58:41] -rw-r--r-- 2 boinc boinc 199344746 Dec 18 03:19 ATLAS.root_0
[2025-12-18 04:58:41] -rw-r--r-- 2 boinc boinc    592380 Dec 18 03:19 input.tar.gz
[2025-12-18 04:58:41] -rw-r--r-- 2 boinc boinc     15847 Dec 18 03:19 start_atlas.sh
[2025-12-18 04:58:41] -rw------- 1 boinc boinc 209536630 Dec 18 04:57 HITS.pool.root.1
[2025-12-18 04:58:41] -rw------- 1 boinc boinc   1167360 Dec 18 04:58 result.tar.gz
04:58:42 (478284): run_atlas exited; CPU time 22387.092071
04:58:42 (478284): called boinc_finish(0)

</stderr_txt>
]]>

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