Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:40:04 (1285610): wrapper (7.7.26015): starting
10:40:04 (1285610): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 10:40:04] Arguments: --nthreads 8
[2025-12-17 10:40:04] Threads: 8
[2025-12-17 10:40:04] Checking for CVMFS
[2025-12-17 10:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 10:40:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 10:40:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 10:40:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 10:40:04] 2.13.2.0 2681929 9721 83800 154112 3 188 26082746 39288832 3664 16776704 0 20903979 99.997 290911 38459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 10:40:04] CVMFS is ok
[2025-12-17 10:40:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 10:40:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 10:40:04] Further information can be found at the LHC@home message board.
[2025-12-17 10:40:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 10:40:04] Checking for apptainer binary...
[2025-12-17 10:40:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 10:40:04] Running /usr/bin/apptainer --version
[2025-12-17 10:40:04] apptainer version 1.4.5-2.el9
[2025-12-17 10:40:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 10:40:05] c-210-16.aglt2.org
[2025-12-17 10:40:05] apptainer works
[2025-12-17 10:40:05] Set ATHENA_PROC_NUMBER=8
[2025-12-17 10:40:05] Set ATHENA_CORE_NUMBER=8
[2025-12-17 10:40:05] Starting ATLAS job with PandaID=6932080247
[2025-12-17 10:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 13:02:59]  *** The last 200 lines of the pilot log: ***
[2025-12-17 13:02:59] 2025-12-17 18:02:24,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,198 | INFO     | time since job start (8531s) is within the limit (174528.0s)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,950 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 13:02:59] 2025-12-17 18:02:26,957 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2640.167849999999
[2025-12-17 13:02:59] 2025-12-17 18:02:26,963 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6932080247/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,964 | INFO     | extracted standard info from prmon json
[2025-12-17 13:02:59] 2025-12-17 18:02:26,964 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 13:02:59] 2025-12-17 18:02:26,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 13:02:59] 2025-12-17 18:02:26,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 13:02:59] 2025-12-17 18:02:26,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 13:02:59] 2025-12-17 18:02:26,968 | INFO     | fitting pss+swap vs Time
[2025-12-17 13:02:59] 2025-12-17 18:02:26,968 | INFO     | sum of square deviations: 850825255.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,969 | INFO     | sum of deviations: 2350265279.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,969 | INFO     | mean x: 1765990277.5
[2025-12-17 13:02:59] 2025-12-17 18:02:26,969 | INFO     | mean y: 2542515.2285714285
[2025-12-17 13:02:59] 2025-12-17 18:02:26,969 | INFO     | intersect: -4875716102.353044
[2025-12-17 13:02:59] 2025-12-17 18:02:26,969 | INFO     | chi2: 1.8809029881629096
[2025-12-17 13:02:59] 2025-12-17 18:02:26,970 | INFO     | sum of square deviations: 762879420.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,971 | INFO     | sum of deviations: 11705752258.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,971 | INFO     | mean x: 1765990125.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,971 | INFO     | mean y: 2558297.874074074
[2025-12-17 13:02:59] 2025-12-17 18:02:26,971 | INFO     | intersect: -27095096130.03598
[2025-12-17 13:02:59] 2025-12-17 18:02:26,971 | INFO     | chi2: 1.1922358274448492
[2025-12-17 13:02:59] 2025-12-17 18:02:26,971 | INFO     | current chi2=1.1922358274448492 (change=36.613645948358354 %)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,972 | INFO     | sum of square deviations: 681212772.5
[2025-12-17 13:02:59] 2025-12-17 18:02:26,972 | INFO     | sum of deviations: 12112896849.5
[2025-12-17 13:02:59] 2025-12-17 18:02:26,973 | INFO     | mean x: 1765989972.5
[2025-12-17 13:02:59] 2025-12-17 18:02:26,973 | INFO     | mean y: 2559058.546153846
[2025-12-17 13:02:59] 2025-12-17 18:02:26,973 | INFO     | intersect: -31399163336.70421
[2025-12-17 13:02:59] 2025-12-17 18:02:26,973 | INFO     | chi2: 1.1917128656470908
[2025-12-17 13:02:59] 2025-12-17 18:02:26,973 | INFO     | current chi2=1.1917128656470908 (change=0.04386395591543739 %)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,973 | INFO     | right removable region: 129
[2025-12-17 13:02:59] 2025-12-17 18:02:26,974 | INFO     | sum of square deviations: 762879420.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,974 | INFO     | sum of deviations: -14930055305.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,974 | INFO     | mean x: 1765990430.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,975 | INFO     | mean y: 2571916.837037037
[2025-12-17 13:02:59] 2025-12-17 18:02:26,975 | INFO     | intersect: 34564173785.715256
[2025-12-17 13:02:59] 2025-12-17 18:02:26,975 | INFO     | chi2: 0.7241979026371642
[2025-12-17 13:02:59] 2025-12-17 18:02:26,975 | INFO     | current chi2=0.7241979026371642 (change=61.497328294188456 %)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,975 | INFO     | sum of square deviations: 681212772.5
[2025-12-17 13:02:59] 2025-12-17 18:02:26,976 | INFO     | sum of deviations: -15333228888.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,976 | INFO     | mean x: 1765990582.5
[2025-12-17 13:02:59] 2025-12-17 18:02:26,976 | INFO     | mean y: 2572659.5384615385
[2025-12-17 13:02:59] 2025-12-17 18:02:26,977 | INFO     | intersect: 39752763655.14982
[2025-12-17 13:02:59] 2025-12-17 18:02:26,977 | INFO     | chi2: 0.7199647144832672
[2025-12-17 13:02:59] 2025-12-17 18:02:26,977 | INFO     | current chi2=0.7199647144832672 (change=0.5845347160606127 %)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,977 | INFO     | left removable region: 20
[2025-12-17 13:02:59] 2025-12-17 18:02:26,977 | INFO     | sum of square deviations: 401533110.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,978 | INFO     | sum of deviations: -4892242273.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,978 | INFO     | mean x: 1765990552.0
[2025-12-17 13:02:59] 2025-12-17 18:02:26,978 | INFO     | mean y: 2593650.6055045873
[2025-12-17 13:02:59] 2025-12-17 18:02:26,978 | INFO     | intersect: 21519259193.362377
[2025-12-17 13:02:59] 2025-12-17 18:02:26,979 | INFO     | chi2: 0.011299257885319951
[2025-12-17 13:02:59] 2025-12-17 18:02:26,979 | INFO     | current memory leak: -12.18 B/s (using 109 data points, chi2=0.01)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,979 | INFO     | could have reported an average CPU frequency of 2625 MHz (8 samples)
[2025-12-17 13:02:59] 2025-12-17 18:02:26,979 | INFO     | ..............................
[2025-12-17 13:02:59] 2025-12-17 18:02:26,979 | INFO     | . Timing measurements:
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . get job = 0 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . initial setup = 2 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . payload setup = 4 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . stage-in = 0 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . payload execution = 8501 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . stage-out = 1 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | . log creation = 0 s
[2025-12-17 13:02:59] 2025-12-17 18:02:26,980 | INFO     | ..............................
[2025-12-17 13:02:59] 2025-12-17 18:02:27,180 | INFO     | 
[2025-12-17 13:02:59] 2025-12-17 18:02:27,180 | INFO     | job summary report
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | --------------------------------------------------
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | PanDA job id: 6932080247
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | task id: 47905890
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | errors: (none)
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | pilot state: finished 
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | transexitcode: 0
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | exeerrorcode: 0
[2025-12-17 13:02:59] 2025-12-17 18:02:27,181 | INFO     | exeerrordiag: 
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | exitcode: 0
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | exitmsg: OK
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | cpuconsumptiontime: 64381 s
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | nevents: 400
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | neventsw: 0
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | pid: 1296337
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | pgrp: 1296337
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | corecount: 8
[2025-12-17 13:02:59] 2025-12-17 18:02:27,182 | INFO     | event service: False
[2025-12-17 13:02:59] 2025-12-17 18:02:27,183 | INFO     | sizes: {0: 2283699, 1: 2283898, 4: 2284160, 12: 2284188, 8508: 2312127, 8510: 2321125, 8513: 2321309, 8517: 2321503}
[2025-12-17 13:02:59] 2025-12-17 18:02:27,183 | INFO     | --------------------------------------------------
[2025-12-17 13:02:59] 2025-12-17 18:02:27,183 | INFO     | 
[2025-12-17 13:02:59] 2025-12-17 18:02:27,183 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 13:02:59] 2025-12-17 18:02:27,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,199 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,200 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | job 6932080247 has completed (purged errors)
[2025-12-17 13:02:59] 2025-12-17 18:02:27,201 | INFO     | overall cleanup function is called
[2025-12-17 13:02:59] 2025-12-17 18:02:28,208 | INFO     | --- collectZombieJob: --- 10, [1296337]
[2025-12-17 13:02:59] 2025-12-17 18:02:28,209 | INFO     | zombie collector waiting for pid 1296337
[2025-12-17 13:02:59] 2025-12-17 18:02:28,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 13:02:59] 2025-12-17 18:02:28,209 | INFO     | collected zombie processes
[2025-12-17 13:02:59] 2025-12-17 18:02:28,209 | INFO     | will attempt to kill all subprocesses of pid=1296337
[2025-12-17 13:02:59] 2025-12-17 18:02:28,423 | INFO     | process IDs to be killed: [1296337] (in reverse order)
[2025-12-17 13:02:59] 2025-12-17 18:02:28,484 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 13:02:59] 2025-12-17 18:02:28,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 13:02:59] 2025-12-17 18:02:28,490 | INFO     | did not find any defunct processes belonging to 1296337
[2025-12-17 13:02:59] 2025-12-17 18:02:28,496 | INFO     | did not find any defunct processes belonging to 1296337
[2025-12-17 13:02:59] 2025-12-17 18:02:28,496 | INFO     | ready for new job
[2025-12-17 13:02:59] 2025-12-17 18:02:28,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 13:02:59] 2025-12-17 18:02:28,498 | INFO     | ***************************************
[2025-12-17 13:02:59] 2025-12-17 18:02:28,498 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 13:02:59] 2025-12-17 18:02:28,498 | INFO     | ***************************************
[2025-12-17 13:02:59] 2025-12-17 18:02:28,498 | INFO     | 
[2025-12-17 13:02:59] 2025-12-17 18:02:28,500 | INFO     | architecture information:
[2025-12-17 13:02:59] 2025-12-17 18:02:28,500 | INFO     | executing command: cat /etc/os-release
[2025-12-17 13:02:59] 2025-12-17 18:02:28,512 | INFO     | cat /etc/os-release:
[2025-12-17 13:02:59] NAME="CentOS Linux"
[2025-12-17 13:02:59] VERSION="7 (Core)"
[2025-12-17 13:02:59] ID="centos"
[2025-12-17 13:02:59] ID_LIKE="rhel fedora"
[2025-12-17 13:02:59] VERSION_ID="7"
[2025-12-17 13:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 13:02:59] ANSI_COLOR="0;31"
[2025-12-17 13:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 13:02:59] HOME_URL="https://www.centos.org/"
[2025-12-17 13:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 13:02:59] 
[2025-12-17 13:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 13:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 13:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 13:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 13:02:59] 
[2025-12-17 13:02:59] 2025-12-17 18:02:28,512 | INFO     | ***************************************
[2025-12-17 13:02:59] 2025-12-17 18:02:29,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 13:02:59] 2025-12-17 18:02:29,028 | INFO     | sufficient remaining disk space (51127517184 B)
[2025-12-17 13:02:59] 2025-12-17 18:02:29,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 13:02:59] 2025-12-17 18:02:29,029 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 13:02:59] 2025-12-17 18:02:29,029 | INFO     | update_server=False
[2025-12-17 13:02:59] 2025-12-17 18:02:29,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 13:02:59] 2025-12-17 18:02:29,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:02:59] 2025-12-17 18:02:29,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 13:02:59] 2025-12-17 18:02:29,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:02:59] 2025-12-17 18:02:29,030 | INFO     | aborting loop
[2025-12-17 13:02:59] 2025-12-17 18:02:29,130 | INFO     | [monitor] cgroup control has ended
[2025-12-17 13:02:59] 2025-12-17 18:02:29,261 | INFO     | all job control threads have been joined
[2025-12-17 13:02:59] 2025-12-17 18:02:29,326 | INFO     | all data control threads have been joined
[2025-12-17 13:02:59] 2025-12-17 18:02:29,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 13:02:59] 2025-12-17 18:02:29,757 | INFO     | all payload control threads have been joined
[2025-12-17 13:02:59] 2025-12-17 18:02:30,034 | INFO     | [job] retrieve thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,035 | INFO     | [job] queue monitor thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,035 | INFO     | [job] job monitor thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,178 | INFO     | [payload] failed_post thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,194 | INFO     | [data] copytool_in thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,263 | INFO     | [job] control thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,331 | INFO     | [data] control thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,358 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,758 | INFO     | [payload] control thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,809 | INFO     | [job] validate thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,809 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,813 | INFO     | [payload] validate_post thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:30,962 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:31,035 | INFO     | [data] copytool_out thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:31,361 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:33,419 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 13:02:59] 2025-12-17 18:02:34,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053247506240)>', '<ExcThread(monitor, started 140052743042816)>']
[2025-12-17 13:02:59] 2025-12-17 18:02:39,391 | INFO     | all workflow threads have been joined
[2025-12-17 13:02:59] 2025-12-17 18:02:39,391 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 13:02:59] 2025-12-17 18:02:39,391 | INFO     | traces error code: 0
[2025-12-17 13:02:59] 2025-12-17 18:02:39,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 13:02:59] 2025-12-17 18:02:59,537 | INFO     | PID=1289925 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 13:02:59] 2025-12-17 18:02:59,538 | INFO     | .. there are 5 such processes running
[2025-12-17 13:02:59] 2025-12-17 18:02:59,538 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 13:02:59] 2025-12-17 18:02:59,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 13:02:59] 2025-12-17 18:02:59,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 13:02:59] 2025-12-17 18:02:59,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 13:02:59] 2025-12-17 18:02:59,538 | INFO     | [monitor] control thread has ended
[2025-12-17 13:02:59] 2025-12-17 18:02:59,643 [wrapper] ==== pilot stdout END ====
[2025-12-17 13:02:59] 2025-12-17 18:02:59,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 13:02:59] 2025-12-17 18:02:59,649 [wrapper] pilotpid: 1289925
[2025-12-17 13:02:59] 2025-12-17 18:02:59,651 [wrapper] Pilot exit status: 0
[2025-12-17 13:02:59] 2025-12-17 18:02:59,660 [wrapper] pandaids: 6932080247
[2025-12-17 13:02:59] 2025-12-17 18:02:59,701 [wrapper] cleanup supervisor_pilot 1495343 1289926
[2025-12-17 13:02:59] 2025-12-17 18:02:59,704 [wrapper] Test setup, not cleaning
[2025-12-17 13:02:59] 2025-12-17 18:02:59,707 [wrapper] apfmon messages muted
[2025-12-17 13:02:59] 2025-12-17 18:02:59,709 [wrapper] ==== wrapper stdout END ====
[2025-12-17 13:02:59] 2025-12-17 18:02:59,711 [wrapper] ==== wrapper stderr END ====
[2025-12-17 13:02:59]  *** Error codes and diagnostics ***
[2025-12-17 13:02:59]     "exeErrorCode": 0,
[2025-12-17 13:02:59]     "exeErrorDiag": "",
[2025-12-17 13:02:59]     "pilotErrorCode": 0,
[2025-12-17 13:02:59]     "pilotErrorDiag": "",
[2025-12-17 13:02:59]  *** Listing of results directory ***
[2025-12-17 13:02:59] total 396240
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 13:02:59] -rwx------. 1 boincer umatlas     36322 Dec 16 22:52 runpilot2-wrapper.sh
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas       100 Dec 17 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 13:02:59] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 10:40 run_atlas
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas       105 Dec 17 10:40 job.xml
[2025-12-17 13:02:59] -rw-r--r--. 2 boincer umatlas 196223930 Dec 17 10:40 EVNT.47905888._000017.pool.root.1
[2025-12-17 13:02:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:40 start_atlas.sh
[2025-12-17 13:02:59] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 10:40 shared
[2025-12-17 13:02:59] -rw-r--r--. 2 boincer umatlas    592380 Dec 17 10:40 input.tar.gz
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas         0 Dec 17 10:40 boinc_lockfile
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas      2445 Dec 17 10:40 pandaJob.out
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas        57 Dec 17 10:40 setup.sh.local
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas    987423 Dec 17 10:40 agis_schedconf.cvmfs.json
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas   1516240 Dec 17 10:40 agis_ddmendpoints.agis.ALL.json
[2025-12-17 13:02:59] drwx------. 5 boincer umatlas      4096 Dec 17 10:40 pilot3
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas 202415250 Dec 17 13:01 HITS.47905890._000459.pool.root.1
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas      6663 Dec 17 13:01 init_data.xml
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas       529 Dec 17 13:01 boinc_task_state.xml
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas        95 Dec 17 13:02 pilot_heartbeat.json
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas      1046 Dec 17 13:02 memory_monitor_summary.json
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas    377527 Dec 17 13:02 log.47905890._000459.job.log.tgz.1
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas      7803 Dec 17 13:02 heartbeat.json
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas        27 Dec 17 13:02 wrapper_checkpoint.txt
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 13:02 boinc_mmap_file
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas       822 Dec 17 13:02 pilotlog.txt
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas   1218541 Dec 17 13:02 log.47905890._000459.job.log.1
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas       357 Dec 17 13:02 output.list
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas       620 Dec 17 13:02 runtime_log
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas   1617920 Dec 17 13:02 result.tar.gz
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas       652 Dec 17 13:02 zdMLDmBlxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUNbKDmpPoA9n.diag
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas      9342 Dec 17 13:02 runtime_log.err
[2025-12-17 13:02:59] -rw-r--r--. 1 boincer umatlas     21097 Dec 17 13:02 stderr.txt
[2025-12-17 13:02:59] HITS file was successfully produced:
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas 202415250 Dec 17 13:01 shared/HITS.pool.root.1
[2025-12-17 13:02:59]  *** Contents of shared directory: ***
[2025-12-17 13:02:59] total 391484
[2025-12-17 13:02:59] -rw-r--r--. 2 boincer umatlas 196223930 Dec 17 10:40 ATLAS.root_0
[2025-12-17 13:02:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:40 start_atlas.sh
[2025-12-17 13:02:59] -rw-r--r--. 2 boincer umatlas    592380 Dec 17 10:40 input.tar.gz
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas 202415250 Dec 17 13:01 HITS.pool.root.1
[2025-12-17 13:02:59] -rw-------. 1 boincer umatlas   1617920 Dec 17 13:02 result.tar.gz
13:03:00 (1285610): run_atlas exited; CPU time 64574.666935
13:03:00 (1285610): called boinc_finish(0)

</stderr_txt>
]]>

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