Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:25 (1307163): wrapper (7.7.26015): starting
10:42:25 (1307163): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 10:42:25] Arguments: --nthreads 8
[2025-12-17 10:42:25] Threads: 8
[2025-12-17 10:42:25] Checking for CVMFS
[2025-12-17 10:42:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 10:42:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 10:42:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 10:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 10:42:25] 2.13.2.0 2681929 9723 82660 154112 1 188 26082746 39288832 2796 16776704 0 20963493 99.997 290911 38459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 10:42:25] CVMFS is ok
[2025-12-17 10:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 10:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 10:42:25] Further information can be found at the LHC@home message board.
[2025-12-17 10:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 10:42:25] Checking for apptainer binary...
[2025-12-17 10:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 10:42:25] Running /usr/bin/apptainer --version
[2025-12-17 10:42:25] apptainer version 1.4.5-2.el9
[2025-12-17 10:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 10:42:25] c-210-16.aglt2.org
[2025-12-17 10:42:25] apptainer works
[2025-12-17 10:42:25] Set ATHENA_PROC_NUMBER=8
[2025-12-17 10:42:25] Set ATHENA_CORE_NUMBER=8
[2025-12-17 10:42:25] Starting ATLAS job with PandaID=6932080267
[2025-12-17 10:42:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 13:07:09]  *** The last 200 lines of the pilot log: ***
[2025-12-17 13:07:09] 2025-12-17 18:06:36,320 | INFO     | time since job start (8643s) is within the limit (174528.0s)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,613 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 13:07:09] 2025-12-17 18:06:36,617 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2739.8888999999995
[2025-12-17 13:07:09] 2025-12-17 18:06:36,621 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6932080267/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,621 | INFO     | extracted standard info from prmon json
[2025-12-17 13:07:09] 2025-12-17 18:06:36,622 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 13:07:09] 2025-12-17 18:06:36,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 13:07:09] 2025-12-17 18:06:36,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 13:07:09] 2025-12-17 18:06:36,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 13:07:09] 2025-12-17 18:06:36,624 | INFO     | fitting pss+swap vs Time
[2025-12-17 13:07:09] 2025-12-17 18:06:36,624 | INFO     | sum of square deviations: 887813855.5
[2025-12-17 13:07:09] 2025-12-17 18:06:36,624 | INFO     | sum of deviations: 3923655816.5
[2025-12-17 13:07:09] 2025-12-17 18:06:36,624 | INFO     | mean x: 1765990474.5
[2025-12-17 13:07:09] 2025-12-17 18:06:36,625 | INFO     | mean y: 2532289.8943661973
[2025-12-17 13:07:09] 2025-12-17 18:06:36,625 | INFO     | intersect: -7802187983.651218
[2025-12-17 13:07:09] 2025-12-17 18:06:36,625 | INFO     | chi2: 2.0265750246824275
[2025-12-17 13:07:09] 2025-12-17 18:06:36,625 | INFO     | sum of square deviations: 797291228.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,625 | INFO     | sum of deviations: 13805188099.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,625 | INFO     | mean x: 1765990322.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | mean y: 2548479.817518248
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | intersect: -30575774371.39486
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | chi2: 1.240637636074302
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | current chi2=1.240637636074302 (change=38.781558986758206 %)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | sum of square deviations: 713140813.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | sum of deviations: 14041881579.999998
[2025-12-17 13:07:09] 2025-12-17 18:06:36,626 | INFO     | mean x: 1765990169.5
[2025-12-17 13:07:09] 2025-12-17 18:06:36,627 | INFO     | mean y: 2548909.1818181816
[2025-12-17 13:07:09] 2025-12-17 18:06:36,627 | INFO     | intersect: -34770141672.423035
[2025-12-17 13:07:09] 2025-12-17 18:06:36,627 | INFO     | chi2: 1.240053121114202
[2025-12-17 13:07:09] 2025-12-17 18:06:36,627 | INFO     | current chi2=1.240053121114202 (change=0.04711407610924909 %)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,627 | INFO     | right removable region: 131
[2025-12-17 13:07:09] 2025-12-17 18:06:36,627 | INFO     | sum of square deviations: 797291228.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | sum of deviations: -15440515261.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | mean x: 1765990627.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | mean y: 2564425.291970803
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | intersect: 34203122852.82864
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | chi2: 0.8280565946736923
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | current chi2=0.8280565946736923 (change=59.14009673520712 %)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,628 | INFO     | sum of square deviations: 713140813.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | sum of deviations: -16290957619.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | mean x: 1765990779.5
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | mean y: 2565948.878787879
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | intersect: 40344782268.47579
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | chi2: 0.8211172109598024
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | current chi2=0.8211172109598024 (change=0.8380325401097104 %)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | left removable region: 20
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | sum of square deviations: 424045160.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,629 | INFO     | sum of deviations: -5516565683.000001
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | mean x: 1765990749.0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | mean y: 2587581.954954955
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | intersect: 22977036724.185154
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | chi2: 0.011081092816867998
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | current memory leak: -13.01 B/s (using 111 data points, chi2=0.01)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | could have reported an average CPU frequency of 2672 MHz (8 samples)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | ..............................
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | . Timing measurements:
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | . get job = 0 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | . initial setup = 2 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,630 | INFO     | . payload setup = 3 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,631 | INFO     | . stage-in = 0 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,631 | INFO     | . payload execution = 8617 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,631 | INFO     | . stage-out = 0 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,631 | INFO     | . log creation = 0 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,631 | INFO     | ..............................
[2025-12-17 13:07:09] 2025-12-17 18:06:36,683 | INFO     | 
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | job summary report
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | --------------------------------------------------
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | PanDA job id: 6932080267
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | task id: 47905890
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | errors: (none)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | pilot state: finished 
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | transexitcode: 0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | exeerrorcode: 0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | exeerrordiag: 
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | exitcode: 0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | exitmsg: OK
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | cpuconsumptiontime: 65193 s
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | nevents: 400
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | neventsw: 0
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | pid: 1317360
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | pgrp: 1317360
[2025-12-17 13:07:09] 2025-12-17 18:06:36,684 | INFO     | corecount: 8
[2025-12-17 13:07:09] 2025-12-17 18:06:36,685 | INFO     | event service: False
[2025-12-17 13:07:09] 2025-12-17 18:06:36,685 | INFO     | sizes: {0: 2283699, 1: 2283898, 3: 2284160, 11: 2284188, 8624: 2312183, 8626: 2321181, 8627: 2321365, 8629: 2321559}
[2025-12-17 13:07:09] 2025-12-17 18:06:36,685 | INFO     | --------------------------------------------------
[2025-12-17 13:07:09] 2025-12-17 18:06:36,685 | INFO     | 
[2025-12-17 13:07:09] 2025-12-17 18:06:36,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 13:07:09] 2025-12-17 18:06:36,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 13:07:09] 2025-12-17 18:06:36,698 | INFO     | job 6932080267 has completed (purged errors)
[2025-12-17 13:07:09] 2025-12-17 18:06:36,698 | INFO     | overall cleanup function is called
[2025-12-17 13:07:09] 2025-12-17 18:06:37,705 | INFO     | --- collectZombieJob: --- 10, [1317360]
[2025-12-17 13:07:09] 2025-12-17 18:06:37,705 | INFO     | zombie collector waiting for pid 1317360
[2025-12-17 13:07:09] 2025-12-17 18:06:37,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 13:07:09] 2025-12-17 18:06:37,705 | INFO     | collected zombie processes
[2025-12-17 13:07:09] 2025-12-17 18:06:37,705 | INFO     | will attempt to kill all subprocesses of pid=1317360
[2025-12-17 13:07:09] 2025-12-17 18:06:37,834 | INFO     | process IDs to be killed: [1317360] (in reverse order)
[2025-12-17 13:07:09] 2025-12-17 18:06:37,887 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 13:07:09] 2025-12-17 18:06:37,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 13:07:09] 2025-12-17 18:06:37,891 | INFO     | did not find any defunct processes belonging to 1317360
[2025-12-17 13:07:09] 2025-12-17 18:06:37,893 | INFO     | did not find any defunct processes belonging to 1317360
[2025-12-17 13:07:09] 2025-12-17 18:06:37,894 | INFO     | ready for new job
[2025-12-17 13:07:09] 2025-12-17 18:06:37,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 13:07:09] 2025-12-17 18:06:37,895 | INFO     | ***************************************
[2025-12-17 13:07:09] 2025-12-17 18:06:37,895 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 13:07:09] 2025-12-17 18:06:37,895 | INFO     | ***************************************
[2025-12-17 13:07:09] 2025-12-17 18:06:37,895 | INFO     | 
[2025-12-17 13:07:09] 2025-12-17 18:06:37,896 | INFO     | architecture information:
[2025-12-17 13:07:09] 2025-12-17 18:06:37,897 | INFO     | executing command: cat /etc/os-release
[2025-12-17 13:07:09] 2025-12-17 18:06:37,906 | INFO     | cat /etc/os-release:
[2025-12-17 13:07:09] NAME="CentOS Linux"
[2025-12-17 13:07:09] VERSION="7 (Core)"
[2025-12-17 13:07:09] ID="centos"
[2025-12-17 13:07:09] ID_LIKE="rhel fedora"
[2025-12-17 13:07:09] VERSION_ID="7"
[2025-12-17 13:07:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 13:07:09] ANSI_COLOR="0;31"
[2025-12-17 13:07:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 13:07:09] HOME_URL="https://www.centos.org/"
[2025-12-17 13:07:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 13:07:09] 
[2025-12-17 13:07:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 13:07:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 13:07:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 13:07:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 13:07:09] 
[2025-12-17 13:07:09] 2025-12-17 18:06:37,907 | INFO     | ***************************************
[2025-12-17 13:07:09] 2025-12-17 18:06:38,410 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 13:07:09] 2025-12-17 18:06:38,421 | INFO     | sufficient remaining disk space (51268026368 B)
[2025-12-17 13:07:09] 2025-12-17 18:06:38,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 13:07:09] 2025-12-17 18:06:38,422 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 13:07:09] 2025-12-17 18:06:38,422 | INFO     | update_server=False
[2025-12-17 13:07:09] 2025-12-17 18:06:38,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 13:07:09] 2025-12-17 18:06:38,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:07:09] 2025-12-17 18:06:38,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:07:09] 2025-12-17 18:06:38,423 | INFO     | aborting loop
[2025-12-17 13:07:09] 2025-12-17 18:06:38,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 13:07:09] 2025-12-17 18:06:38,976 | INFO     | all payload control threads have been joined
[2025-12-17 13:07:09] 2025-12-17 18:06:39,104 | INFO     | all data control threads have been joined
[2025-12-17 13:07:09] 2025-12-17 18:06:39,427 | INFO     | [job] retrieve thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:39,428 | INFO     | [job] queue monitor thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:39,428 | INFO     | [job] job monitor thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:39,497 | INFO     | [payload] failed_post thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:39,915 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:39,922 | INFO     | all job control threads have been joined
[2025-12-17 13:07:09] 2025-12-17 18:06:39,981 | INFO     | [payload] control thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,047 | INFO     | [job] validate thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,109 | INFO     | [data] control thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,181 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 13:07:09] 2025-12-17 18:06:40,254 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,464 | INFO     | [payload] validate_post thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,562 | INFO     | [data] copytool_out thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,768 | INFO     | [data] copytool_in thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:40,924 | INFO     | [job] control thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:44,216 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:47,372 | INFO     | [monitor] cgroup control has ended
[2025-12-17 13:07:09] 2025-12-17 18:06:49,255 | INFO     | job.realtimelogging is not enabled
[2025-12-17 13:07:09] 2025-12-17 18:06:50,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 13:07:09] 2025-12-17 18:06:51,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126357792576)>', '<ExcThread(monitor, started 140125715556096)>']
[2025-12-17 13:07:09] 2025-12-17 18:06:56,642 | INFO     | all workflow threads have been joined
[2025-12-17 13:07:09] 2025-12-17 18:06:56,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 13:07:09] 2025-12-17 18:06:56,643 | INFO     | traces error code: 0
[2025-12-17 13:07:09] 2025-12-17 18:06:56,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 13:07:09] 2025-12-17 18:07:09,666 | INFO     | PID=1310881 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 13:07:09] 2025-12-17 18:07:09,666 | INFO     | .. there are 5 such processes running
[2025-12-17 13:07:09] 2025-12-17 18:07:09,667 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 13:07:09] 2025-12-17 18:07:09,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 13:07:09] 2025-12-17 18:07:09,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 13:07:09] 2025-12-17 18:07:09,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 13:07:09] 2025-12-17 18:07:09,667 | INFO     | [monitor] control thread has ended
[2025-12-17 13:07:09] 2025-12-17 18:07:09,762 [wrapper] ==== pilot stdout END ====
[2025-12-17 13:07:09] 2025-12-17 18:07:09,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 13:07:09] 2025-12-17 18:07:09,768 [wrapper] pilotpid: 1310881
[2025-12-17 13:07:09] 2025-12-17 18:07:09,770 [wrapper] Pilot exit status: 0
[2025-12-17 13:07:09] 2025-12-17 18:07:09,778 [wrapper] pandaids: 6932080267
[2025-12-17 13:07:09] 2025-12-17 18:07:09,817 [wrapper] cleanup supervisor_pilot 1501426 1310882
[2025-12-17 13:07:09] 2025-12-17 18:07:09,820 [wrapper] Test setup, not cleaning
[2025-12-17 13:07:09] 2025-12-17 18:07:09,822 [wrapper] apfmon messages muted
[2025-12-17 13:07:09] 2025-12-17 18:07:09,824 [wrapper] ==== wrapper stdout END ====
[2025-12-17 13:07:09] 2025-12-17 18:07:09,826 [wrapper] ==== wrapper stderr END ====
[2025-12-17 13:07:09]  *** Error codes and diagnostics ***
[2025-12-17 13:07:09]     "exeErrorCode": 0,
[2025-12-17 13:07:09]     "exeErrorDiag": "",
[2025-12-17 13:07:09]     "pilotErrorCode": 0,
[2025-12-17 13:07:09]     "pilotErrorDiag": "",
[2025-12-17 13:07:09]  *** Listing of results directory ***
[2025-12-17 13:07:09] total 401196
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 13:07:09] -rwx------. 1 boincer umatlas     36322 Dec 16 22:52 runpilot2-wrapper.sh
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas       100 Dec 17 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 13:07:09] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 10:42 run_atlas
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas       105 Dec 17 10:42 job.xml
[2025-12-17 13:07:09] -rw-r--r--. 2 boincer umatlas 197377845 Dec 17 10:42 EVNT.47905888._000018.pool.root.1
[2025-12-17 13:07:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:42 start_atlas.sh
[2025-12-17 13:07:09] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 10:42 shared
[2025-12-17 13:07:09] -rw-r--r--. 2 boincer umatlas    592380 Dec 17 10:42 input.tar.gz
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas         0 Dec 17 10:42 boinc_lockfile
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas      2445 Dec 17 10:42 pandaJob.out
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas        57 Dec 17 10:42 setup.sh.local
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas    987423 Dec 17 10:42 agis_schedconf.cvmfs.json
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas   1516240 Dec 17 10:42 agis_ddmendpoints.agis.ALL.json
[2025-12-17 13:07:09] drwx------. 5 boincer umatlas      4096 Dec 17 10:42 pilot3
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas      6663 Dec 17 13:01 init_data.xml
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas       529 Dec 17 13:05 boinc_task_state.xml
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas 206318008 Dec 17 13:06 HITS.47905890._000479.pool.root.1
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas      1032 Dec 17 13:06 memory_monitor_summary.json
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas        95 Dec 17 13:06 pilot_heartbeat.json
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas    373500 Dec 17 13:06 log.47905890._000479.job.log.tgz.1
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas      7806 Dec 17 13:06 heartbeat.json
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 13:06 boinc_mmap_file
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas        27 Dec 17 13:06 wrapper_checkpoint.txt
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas       822 Dec 17 13:07 pilotlog.txt
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas   1233364 Dec 17 13:07 log.47905890._000479.job.log.1
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas       357 Dec 17 13:07 output.list
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas       620 Dec 17 13:07 runtime_log
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas   1628160 Dec 17 13:07 result.tar.gz
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas      9342 Dec 17 13:07 runtime_log.err
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas       652 Dec 17 13:07 fXULDmBlxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaNbKDmSWKTLo.diag
[2025-12-17 13:07:09] -rw-r--r--. 1 boincer umatlas     21057 Dec 17 13:07 stderr.txt
[2025-12-17 13:07:09] HITS file was successfully produced:
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas 206318008 Dec 17 13:06 shared/HITS.pool.root.1
[2025-12-17 13:07:09]  *** Contents of shared directory: ***
[2025-12-17 13:07:09] total 396428
[2025-12-17 13:07:09] -rw-r--r--. 2 boincer umatlas 197377845 Dec 17 10:42 ATLAS.root_0
[2025-12-17 13:07:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:42 start_atlas.sh
[2025-12-17 13:07:09] -rw-r--r--. 2 boincer umatlas    592380 Dec 17 10:42 input.tar.gz
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas 206318008 Dec 17 13:06 HITS.pool.root.1
[2025-12-17 13:07:09] -rw-------. 1 boincer umatlas   1628160 Dec 17 13:07 result.tar.gz
13:07:11 (1307163): run_atlas exited; CPU time 65379.855451
13:07:11 (1307163): called boinc_finish(0)

</stderr_txt>
]]>

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