Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:19 (4130371): wrapper (7.7.26015): starting
10:23:19 (4130371): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 10:23:19] Arguments: --nthreads 8
[2025-12-17 10:23:19] Threads: 8
[2025-12-17 10:23:19] Checking for CVMFS
[2025-12-17 10:23:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 10:23:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 10:23:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 10:23:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 10:23:20] 2.13.3.0 14106 60416 236200 154112 3 1123 39001791 40960001 34703 16776704 0 818746660 99.724 595865307 47076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 10:23:20] CVMFS is ok
[2025-12-17 10:23:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 10:23:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 10:23:21] Further information can be found at the LHC@home message board.
[2025-12-17 10:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 10:23:21] Checking for apptainer binary...
[2025-12-17 10:23:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 10:23:21] Running /usr/bin/apptainer --version
[2025-12-17 10:23:21] apptainer version 1.4.5-2.el9
[2025-12-17 10:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 10:23:21] c8-7-5.aglt2.org
[2025-12-17 10:23:21] apptainer works
[2025-12-17 10:23:21] Set ATHENA_PROC_NUMBER=8
[2025-12-17 10:23:21] Set ATHENA_CORE_NUMBER=8
[2025-12-17 10:23:22] Starting ATLAS job with PandaID=6932080446
[2025-12-17 10:23:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 13:02:16]  *** The last 200 lines of the pilot log: ***
[2025-12-17 13:02:16] 2025-12-17 18:01:14,670 | INFO     | monitor loop #609: job 0:6932080446 is in state 'finished'
[2025-12-17 13:02:16] 2025-12-17 18:01:14,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,058 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 13:02:16] 2025-12-17 18:01:15,066 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.0843281250004
[2025-12-17 13:02:16] 2025-12-17 18:01:15,092 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6932080446/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,092 | INFO     | extracted standard info from prmon json
[2025-12-17 13:02:16] 2025-12-17 18:01:15,092 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 13:02:16] 2025-12-17 18:01:15,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 13:02:16] 2025-12-17 18:01:15,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 13:02:16] 2025-12-17 18:01:15,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 13:02:16] 2025-12-17 18:01:15,098 | INFO     | fitting pss+swap vs Time
[2025-12-17 13:02:16] 2025-12-17 18:01:15,099 | INFO     | sum of square deviations: 1067558696.4635739
[2025-12-17 13:02:16] 2025-12-17 18:01:15,099 | INFO     | sum of deviations: 59784388355.25163
[2025-12-17 13:02:16] 2025-12-17 18:01:15,099 | INFO     | mean x: 1765989844.0596027
[2025-12-17 13:02:16] 2025-12-17 18:01:15,099 | INFO     | mean y: 2500003.8609271524
[2025-12-17 13:02:16] 2025-12-17 18:01:15,099 | INFO     | intersect: -98894753157.42413
[2025-12-17 13:02:16] 2025-12-17 18:01:15,099 | INFO     | chi2: 6.147568199791922
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | sum of square deviations: 964982773.9452049
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | sum of deviations: 68816480108.0
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | mean x: 1765989691.5616438
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | mean y: 2513011.0
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | intersect: -125936724208.15659
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | chi2: 5.386247284695303
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | current chi2=5.386247284695303 (change=12.384098725775631 %)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | right removable region: 145
[2025-12-17 13:02:16] 2025-12-17 18:01:15,100 | INFO     | sum of square deviations: 964977283.9452049
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | sum of deviations: 7230122192.849304
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | mean x: 1765989996.5616438
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | mean y: 2578039.294520548
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | intersect: -13229156716.4588
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | chi2: 1.5140562218890108
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | current chi2=1.5140562218890108 (change=75.37146115857229 %)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,101 | INFO     | sum of square deviations: 869186696.4255326
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | sum of deviations: -10039839762.06383
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | mean x: 1765990149.06383
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | mean y: 2605244.6737588653
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | intersect: 20401281606.03372
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | chi2: 0.8810048783608915
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | current chi2=0.8810048783608915 (change=41.81161401908137 %)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,106 | INFO     | sum of square deviations: 779954371.4044125
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | sum of deviations: -12422561455.345587
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | mean x: 1765990301.5661764
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | mean y: 2609283.3161764704
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | intersect: 28130053471.169853
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | chi2: 0.8651033289202011
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | current chi2=0.8651033289202011 (change=1.8049331883695292 %)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | left removable region: 30
[2025-12-17 13:02:16] 2025-12-17 18:01:15,107 | INFO     | sum of square deviations: 471568564.5739124
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | sum of deviations: -4365479700.269567
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | mean x: 1765990576.0608695
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | mean y: 2633654.895652174
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | intersect: 16351043175.42198
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | chi2: 0.013379585774356589
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | current memory leak: -9.26 B/s (using 115 data points, chi2=0.01)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | ..............................
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | . Timing measurements:
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | . get job = 0 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | . initial setup = 9 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,108 | INFO     | . payload setup = 65 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,109 | INFO     | . stage-in = 0 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,109 | INFO     | . payload execution = 9196 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,109 | INFO     | . stage-out = 2 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,109 | INFO     | . log creation = 0 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,109 | INFO     | ..............................
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | 
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | job summary report
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | --------------------------------------------------
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | PanDA job id: 6932080446
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | task id: 47928788
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | errors: (none)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | pilot state: finished 
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | transexitcode: 0
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | exeerrorcode: 0
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | exeerrordiag: 
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | exitcode: 0
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | exitmsg: OK
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | cpuconsumptiontime: 37397 s
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | nevents: 400
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | neventsw: 0
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | pid: 4170373
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | pgrp: 4170373
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | corecount: 8
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | event service: False
[2025-12-17 13:02:16] 2025-12-17 18:01:15,209 | INFO     | sizes: {0: 2283209, 1: 2283894, 2: 2284093, 12: 2284093, 23: 2284121, 34: 2284149, 42: 2284567, 45: 2284623, 9265: 2312980, 9268: 2321978, 9271: 2322062, 9302: 232
[2025-12-17 13:02:16] 2025-12-17 18:01:15,210 | INFO     | --------------------------------------------------
[2025-12-17 13:02:16] 2025-12-17 18:01:15,210 | INFO     | 
[2025-12-17 13:02:16] 2025-12-17 18:01:15,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | job 6932080446 has completed (purged errors)
[2025-12-17 13:02:16] 2025-12-17 18:01:15,260 | INFO     | overall cleanup function is called
[2025-12-17 13:02:16] 2025-12-17 18:01:16,285 | INFO     | --- collectZombieJob: --- 10, [4170373]
[2025-12-17 13:02:16] 2025-12-17 18:01:16,285 | INFO     | zombie collector waiting for pid 4170373
[2025-12-17 13:02:16] 2025-12-17 18:01:16,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 13:02:16] 2025-12-17 18:01:16,285 | INFO     | collected zombie processes
[2025-12-17 13:02:16] 2025-12-17 18:01:16,285 | INFO     | will attempt to kill all subprocesses of pid=4170373
[2025-12-17 13:02:16] 2025-12-17 18:01:17,688 | INFO     | process IDs to be killed: [4170373] (in reverse order)
[2025-12-17 13:02:16] 2025-12-17 18:01:18,116 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 13:02:16] 2025-12-17 18:01:18,117 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 13:02:16] 2025-12-17 18:01:18,207 | INFO     | did not find any defunct processes belonging to 4170373
[2025-12-17 13:02:16] 2025-12-17 18:01:18,295 | INFO     | did not find any defunct processes belonging to 4170373
[2025-12-17 13:02:16] 2025-12-17 18:01:18,295 | INFO     | ready for new job
[2025-12-17 13:02:16] 2025-12-17 18:01:18,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 13:02:16] 2025-12-17 18:01:18,296 | INFO     | ***************************************
[2025-12-17 13:02:16] 2025-12-17 18:01:18,296 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 13:02:16] 2025-12-17 18:01:18,296 | INFO     | ***************************************
[2025-12-17 13:02:16] 2025-12-17 18:01:18,296 | INFO     | 
[2025-12-17 13:02:16] 2025-12-17 18:01:18,310 | INFO     | architecture information:
[2025-12-17 13:02:16] 2025-12-17 18:01:18,320 | INFO     | executing command: cat /etc/os-release
[2025-12-17 13:02:16] 2025-12-17 18:01:18,416 | INFO     | cat /etc/os-release:
[2025-12-17 13:02:16] NAME="CentOS Linux"
[2025-12-17 13:02:16] VERSION="7 (Core)"
[2025-12-17 13:02:16] ID="centos"
[2025-12-17 13:02:16] ID_LIKE="rhel fedora"
[2025-12-17 13:02:16] VERSION_ID="7"
[2025-12-17 13:02:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 13:02:16] ANSI_COLOR="0;31"
[2025-12-17 13:02:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 13:02:16] HOME_URL="https://www.centos.org/"
[2025-12-17 13:02:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 13:02:16] 
[2025-12-17 13:02:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 13:02:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 13:02:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 13:02:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 13:02:16] 
[2025-12-17 13:02:16] 2025-12-17 18:01:18,416 | INFO     | ***************************************
[2025-12-17 13:02:16] 2025-12-17 18:01:18,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 13:02:16] 2025-12-17 18:01:18,985 | INFO     | sufficient remaining disk space (170454417408 B)
[2025-12-17 13:02:16] 2025-12-17 18:01:18,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 13:02:16] 2025-12-17 18:01:18,985 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 13:02:16] 2025-12-17 18:01:18,985 | INFO     | update_server=False
[2025-12-17 13:02:16] 2025-12-17 18:01:18,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 13:02:16] 2025-12-17 18:01:18,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:02:16] 2025-12-17 18:01:18,986 | INFO     | aborting loop
[2025-12-17 13:02:16] 2025-12-17 18:01:19,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 13:02:16] 2025-12-17 18:01:19,041 | INFO     | all data control threads have been joined
[2025-12-17 13:02:16] 2025-12-17 18:01:19,348 | INFO     | all job control threads have been joined
[2025-12-17 13:02:16] 2025-12-17 18:01:19,991 | INFO     | [job] retrieve thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:19,991 | INFO     | [job] job monitor thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:20,047 | INFO     | [data] control thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:20,189 | INFO     | all payload control threads have been joined
[2025-12-17 13:02:16] 2025-12-17 18:01:20,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:02:16] 2025-12-17 18:01:20,249 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:20,353 | INFO     | [job] control thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:20,994 | INFO     | [payload] validate_post thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,019 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,039 | INFO     | [data] copytool_in thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,042 | INFO     | [data] copytool_out thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,073 | INFO     | [job] validate thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,204 | INFO     | [payload] control thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,245 | INFO     | [job] queue monitor thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,266 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,466 | INFO     | [payload] failed_post thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:21,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 13:02:16] 2025-12-17 18:01:25,804 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 13:02:16] 2025-12-17 18:01:48,232 | INFO     | PID=4138676 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 13:02:16] 2025-12-17 18:01:48,232 | INFO     | .. there are 41 such processes running
[2025-12-17 13:02:16] 2025-12-17 18:01:48,232 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 13:02:16] 2025-12-17 18:01:48,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 13:02:16] 2025-12-17 18:01:48,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 13:02:16] 2025-12-17 18:02:08,287 | INFO     | [monitor] cgroup control has ended
[2025-12-17 13:02:16] 2025-12-17 18:02:08,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683792742208)>', '<ExcThread(monitor, started 139683073881856)>']
[2025-12-17 13:02:16] 2025-12-17 18:02:09,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 13:02:16] 2025-12-17 18:02:09,398 | INFO     | [monitor] control thread has ended
[2025-12-17 13:02:16] 2025-12-17 18:02:13,603 | INFO     | all workflow threads have been joined
[2025-12-17 13:02:16] 2025-12-17 18:02:13,605 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 13:02:16] 2025-12-17 18:02:13,606 | INFO     | traces error code: 0
[2025-12-17 13:02:16] 2025-12-17 18:02:13,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 13:02:16] 2025-12-17 18:02:15,078 [wrapper] ==== pilot stdout END ====
[2025-12-17 13:02:16] 2025-12-17 18:02:15,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 13:02:16] 2025-12-17 18:02:15,133 [wrapper] pilotpid: 4138676
[2025-12-17 13:02:16] 2025-12-17 18:02:15,151 [wrapper] Pilot exit status: 0
[2025-12-17 13:02:16] 2025-12-17 18:02:15,255 [wrapper] pandaids: 6932080446
[2025-12-17 13:02:16] 2025-12-17 18:02:15,628 [wrapper] cleanup supervisor_pilot 1248996 4138677
[2025-12-17 13:02:16] 2025-12-17 18:02:15,680 [wrapper] Test setup, not cleaning
[2025-12-17 13:02:16] 2025-12-17 18:02:15,695 [wrapper] apfmon messages muted
[2025-12-17 13:02:16] 2025-12-17 18:02:15,732 [wrapper] ==== wrapper stdout END ====
[2025-12-17 13:02:16] 2025-12-17 18:02:15,755 [wrapper] ==== wrapper stderr END ====
[2025-12-17 13:02:16]  *** Error codes and diagnostics ***
[2025-12-17 13:02:16]     "exeErrorCode": 0,
[2025-12-17 13:02:16]     "exeErrorDiag": "",
[2025-12-17 13:02:16]     "pilotErrorCode": 0,
[2025-12-17 13:02:16]     "pilotErrorDiag": "",
[2025-12-17 13:02:16]  *** Listing of results directory ***
[2025-12-17 13:02:16] total 626408
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 13:02:16] -rwx------. 1 boincer umatlas     36322 Dec 16 22:50 runpilot2-wrapper.sh
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas       100 Dec 17 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 13:02:16] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 10:23 run_atlas
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas       105 Dec 17 10:23 job.xml
[2025-12-17 13:02:16] -rw-r--r--. 2 boincer umatlas 332228511 Dec 17 10:23 EVNT.47928786._000001.pool.root.1
[2025-12-17 13:02:16] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:23 start_atlas.sh
[2025-12-17 13:02:16] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 10:23 shared
[2025-12-17 13:02:16] -rw-r--r--. 2 boincer umatlas    592396 Dec 17 10:23 input.tar.gz
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas         0 Dec 17 10:23 boinc_lockfile
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas      2572 Dec 17 10:23 pandaJob.out
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas        57 Dec 17 10:23 setup.sh.local
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas    987423 Dec 17 10:24 agis_schedconf.cvmfs.json
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas   1516240 Dec 17 10:24 agis_ddmendpoints.agis.ALL.json
[2025-12-17 13:02:16] drwx------. 5 boincer umatlas      4096 Dec 17 10:24 pilot3
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas      7172 Dec 17 12:55 init_data.xml
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas 302097299 Dec 17 12:59 HITS.47928788._000005.pool.root.1
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas       529 Dec 17 12:59 boinc_task_state.xml
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas      1053 Dec 17 13:00 memory_monitor_summary.json
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas    377593 Dec 17 13:00 log.47928788._000005.job.log.tgz.1
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas        95 Dec 17 13:00 pilot_heartbeat.json
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas      7789 Dec 17 13:01 heartbeat.json
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 13:02 boinc_mmap_file
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas        27 Dec 17 13:02 wrapper_checkpoint.txt
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas      4825 Dec 17 13:02 pilotlog.txt
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas   1218303 Dec 17 13:02 log.47928788._000005.job.log.1
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas       357 Dec 17 13:02 output.list
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas       620 Dec 17 13:02 runtime_log
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas   1617920 Dec 17 13:02 result.tar.gz
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas       655 Dec 17 13:02 yGFKDmEjxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaKbKDmxPYEYm.diag
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas      9332 Dec 17 13:02 runtime_log.err
[2025-12-17 13:02:16] -rw-r--r--. 1 boincer umatlas     21228 Dec 17 13:02 stderr.txt
[2025-12-17 13:02:16] HITS file was successfully produced:
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas 302097299 Dec 17 12:59 shared/HITS.pool.root.1
[2025-12-17 13:02:16]  *** Contents of shared directory: ***
[2025-12-17 13:02:16] total 621648
[2025-12-17 13:02:16] -rw-r--r--. 2 boincer umatlas 332228511 Dec 17 10:23 ATLAS.root_0
[2025-12-17 13:02:16] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:23 start_atlas.sh
[2025-12-17 13:02:16] -rw-r--r--. 2 boincer umatlas    592396 Dec 17 10:23 input.tar.gz
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas 302097299 Dec 17 12:59 HITS.pool.root.1
[2025-12-17 13:02:16] -rw-------. 1 boincer umatlas   1617920 Dec 17 13:02 result.tar.gz
13:02:18 (4130371): run_atlas exited; CPU time 37711.347550
13:02:18 (4130371): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN