Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:18:13 (980514): wrapper (7.7.26015): starting
16:18:13 (980514): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 16:18:13] Arguments: --nthreads 12
[2025-12-17 16:18:13] Threads: 12
[2025-12-17 16:18:13] Checking for CVMFS
[2025-12-17 16:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 16:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 16:18:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 16:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 16:18:14] 2.13.3.0 583647 179 55064 154112 0 188 2990774 4096000 929 130560 0 1109609 99.998 4237 370 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-17 16:18:14] CVMFS is ok
[2025-12-17 16:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 16:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 16:18:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-17 16:18:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-17 16:18:14] Further information can be found at the LHC@home message board.
[2025-12-17 16:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 16:18:14] Checking for apptainer binary...
[2025-12-17 16:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 16:18:14] Running /usr/bin/apptainer --version
[2025-12-17 16:18:14] apptainer version 1.4.5-2.el10_1
[2025-12-17 16:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 16:18:14] OSIRIS
[2025-12-17 16:18:14] apptainer works
[2025-12-17 16:18:14] Set ATHENA_PROC_NUMBER=12
[2025-12-17 16:18:14] Set ATHENA_CORE_NUMBER=12
[2025-12-17 16:18:14] Starting ATLAS job with PandaID=6932079930
[2025-12-17 16:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 16:48:54]  *** The last 200 lines of the pilot log: ***
[2025-12-17 16:48:54]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6932079930/log.47905890._000377.job.log.tgz.1
[2025-12-17 16:48:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/a7/log.47905890._000377.job.log.tgz.1
[2025-12-17 16:48:54]  workdir=None
[2025-12-17 16:48:54] ]
[2025-12-17 16:48:54] 2025-12-17 15:48:12,952 | INFO     | transferring file log.47905890._000377.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6932079930/log.47905890._000377.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-12-17 16:48:54] 2025-12-17 15:48:12,952 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6932079930/log.47905890._000377.job.log.tgz.1 /var/lib/boinc/slots/2/log.47905890._000377.job
[2025-12-17 16:48:54] 2025-12-17 15:48:12,961 | INFO     | adding to output.list: log.47905890._000377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/a7/log.47905890._000377.job.log.tg
[2025-12-17 16:48:54] 2025-12-17 15:48:12,961 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 16:48:54] 2025-12-17 15:48:12,962 | INFO     | summary of transferred files:
[2025-12-17 16:48:54] 2025-12-17 15:48:12,962 | INFO     |  -- lfn=log.47905890._000377.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 16:48:54] 2025-12-17 15:48:12,962 | INFO     | stage-out finished correctly
[2025-12-17 16:48:54] 2025-12-17 15:48:13,566 | INFO     | time since job start (1792s) is within the limit (174528.0s)
[2025-12-17 16:48:54] 2025-12-17 15:48:15,571 | INFO     | time since job start (1794s) is within the limit (174528.0s)
[2025-12-17 16:48:54] 2025-12-17 15:48:16,058 | WARNING  | process 991152 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 16:48:54] 2025-12-17 15:48:16,058 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6932079930/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 16:48:54] 2025-12-17 15:48:16,081 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 16:48:54] 2025-12-17 15:48:16,143 | INFO     | number of running child processes to parent process 991152: 1
[2025-12-17 16:48:54] 2025-12-17 15:48:16,143 | INFO     | maximum number of monitored processes: 6
[2025-12-17 16:48:54] 2025-12-17 15:48:16,645 | INFO     | PID=984408 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 16:48:54] 2025-12-17 15:48:16,645 | INFO     | .. there are 4 such processes running
[2025-12-17 16:48:54] 2025-12-17 15:48:17,645 | INFO     | time since job start (1796s) is within the limit (174528.0s)
[2025-12-17 16:48:54] 2025-12-17 15:48:18,522 | INFO     | job 6932079930 has state=finished
[2025-12-17 16:48:54] 2025-12-17 15:48:18,522 | INFO     | preparing for final server update for job 6932079930 in state='finished'
[2025-12-17 16:48:54] 2025-12-17 15:48:18,523 | INFO     | this job has now completed (state=finished)
[2025-12-17 16:48:54] 2025-12-17 15:48:18,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 16:48:54] 2025-12-17 15:48:18,523 | INFO     | log transfer has been attempted: DONE
[2025-12-17 16:48:54] 2025-12-17 15:48:18,523 | INFO     | job 6932079930 has finished - writing final server update
[2025-12-17 16:48:54] 2025-12-17 15:48:18,523 | INFO     | total number of processed events: 400 (read)
[2025-12-17 16:48:54] 2025-12-17 15:48:18,523 | INFO     | executing command: lscpu
[2025-12-17 16:48:54] 2025-12-17 15:48:18,537 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 16:48:54] 2025-12-17 15:48:18,646 | INFO     | monitor loop #139: job 0:6932079930 is in state 'finished'
[2025-12-17 16:48:54] 2025-12-17 15:48:18,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 16:48:54] 2025-12-17 15:48:19,650 | INFO     | time since job start (1798s) is within the limit (174528.0s)
[2025-12-17 16:48:54] 2025-12-17 15:48:20,669 [wrapper] supervise_pilot (15 min periods counter: 3)
[2025-12-17 16:48:54] 2025-12-17 15:48:21,149 | INFO     | monitor loop #140: job 0:6932079930 is in state 'finished'
[2025-12-17 16:48:54] 2025-12-17 15:48:21,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 16:48:54] 2025-12-17 15:48:21,655 | INFO     | time since job start (1800s) is within the limit (174528.0s)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,614 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 16:48:54] 2025-12-17 15:48:22,616 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 4794.658395833333
[2025-12-17 16:48:54] 2025-12-17 15:48:22,618 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6932079930/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | extracted standard info from prmon json
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | fitting pss+swap vs Time
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | sum of square deviations: 3765652.0
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | sum of deviations: 128058397.99999997
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | mean x: 1765985692.0
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | mean y: 2811272.347826087
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | intersect: -60053003393.59618
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | chi2: 0.0002542339967921825
[2025-12-17 16:48:54] 2025-12-17 15:48:22,619 | INFO     | current memory leak: 34.01 B/s (using 23 data points, chi2=0.00)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | could have reported an average CPU frequency of 4386 MHz (4 samples)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | ..............................
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . Timing measurements:
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . get job = 0 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . initial setup = 0 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . payload setup = 1 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . stage-in = 0 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . payload execution = 1774 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . stage-out = 0 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | . log creation = 0 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,620 | INFO     | ..............................
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | 
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | job summary report
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | --------------------------------------------------
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | PanDA job id: 6932079930
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | task id: 47905890
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | errors: (none)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | pilot state: finished 
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | transexitcode: 0
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | exeerrorcode: 0
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | exeerrordiag: 
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | exitcode: 0
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | exitmsg: OK
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | cpuconsumptiontime: 18985 s
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | nevents: 400
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | neventsw: 0
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | pid: 991152
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | pgrp: 991152
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | corecount: 12
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | event service: False
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | sizes: {0: 2283868, 2: 2284130, 11: 2284158, 1778: 2308982, 1779: 2318035, 1782: 2318035, 1789: 2318357}
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | --------------------------------------------------
[2025-12-17 16:48:54] 2025-12-17 15:48:22,655 | INFO     | 
[2025-12-17 16:48:54] 2025-12-17 15:48:22,656 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-12-17 16:48:54] 2025-12-17 15:48:22,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | job 6932079930 has completed (purged errors)
[2025-12-17 16:48:54] 2025-12-17 15:48:22,665 | INFO     | overall cleanup function is called
[2025-12-17 16:48:54] 2025-12-17 15:48:23,671 | INFO     | --- collectZombieJob: --- 10, [991152]
[2025-12-17 16:48:54] 2025-12-17 15:48:23,671 | INFO     | zombie collector waiting for pid 991152
[2025-12-17 16:48:54] 2025-12-17 15:48:23,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 16:48:54] 2025-12-17 15:48:23,671 | INFO     | collected zombie processes
[2025-12-17 16:48:54] 2025-12-17 15:48:23,671 | INFO     | will attempt to kill all subprocesses of pid=991152
[2025-12-17 16:48:54] 2025-12-17 15:48:23,727 | INFO     | process IDs to be killed: [991152] (in reverse order)
[2025-12-17 16:48:54] 2025-12-17 15:48:23,755 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 16:48:54] 2025-12-17 15:48:23,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 16:48:54] 2025-12-17 15:48:23,759 | INFO     | did not find any defunct processes belonging to 991152
[2025-12-17 16:48:54] 2025-12-17 15:48:23,761 | INFO     | did not find any defunct processes belonging to 991152
[2025-12-17 16:48:54] 2025-12-17 15:48:23,761 | INFO     | ready for new job
[2025-12-17 16:48:54] 2025-12-17 15:48:23,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 16:48:54] 2025-12-17 15:48:23,762 | INFO     | ***************************************
[2025-12-17 16:48:54] 2025-12-17 15:48:23,762 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 16:48:54] 2025-12-17 15:48:23,762 | INFO     | ***************************************
[2025-12-17 16:48:54] 2025-12-17 15:48:23,762 | INFO     | 
[2025-12-17 16:48:54] 2025-12-17 15:48:23,763 | INFO     | architecture information:
[2025-12-17 16:48:54] 2025-12-17 15:48:23,763 | INFO     | executing command: cat /etc/os-release
[2025-12-17 16:48:54] 2025-12-17 15:48:23,770 | INFO     | cat /etc/os-release:
[2025-12-17 16:48:54] NAME="CentOS Linux"
[2025-12-17 16:48:54] VERSION="7 (Core)"
[2025-12-17 16:48:54] ID="centos"
[2025-12-17 16:48:54] ID_LIKE="rhel fedora"
[2025-12-17 16:48:54] VERSION_ID="7"
[2025-12-17 16:48:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 16:48:54] ANSI_COLOR="0;31"
[2025-12-17 16:48:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 16:48:54] HOME_URL="https://www.centos.org/"
[2025-12-17 16:48:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 16:48:54] 
[2025-12-17 16:48:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 16:48:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 16:48:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 16:48:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 16:48:54] 
[2025-12-17 16:48:54] 2025-12-17 15:48:23,770 | INFO     | ***************************************
[2025-12-17 16:48:54] 2025-12-17 15:48:24,273 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-12-17 16:48:54] 2025-12-17 15:48:24,282 | INFO     | sufficient remaining disk space (1265095409664 B)
[2025-12-17 16:48:54] 2025-12-17 15:48:24,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 16:48:54] 2025-12-17 15:48:24,282 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 16:48:54] 2025-12-17 15:48:24,282 | INFO     | update_server=False
[2025-12-17 16:48:54] 2025-12-17 15:48:24,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 16:48:54] 2025-12-17 15:48:24,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 16:48:54] 2025-12-17 15:48:24,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 16:48:54] 2025-12-17 15:48:24,419 | INFO     | [monitor] cgroup control has ended
[2025-12-17 16:48:54] 2025-12-17 15:48:24,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 16:48:54] 2025-12-17 15:48:24,657 | INFO     | aborting loop
[2025-12-17 16:48:54] 2025-12-17 15:48:24,900 | INFO     | all data control threads have been joined
[2025-12-17 16:48:54] 2025-12-17 15:48:25,136 | INFO     | all payload control threads have been joined
[2025-12-17 16:48:54] 2025-12-17 15:48:25,283 | INFO     | [job] queue monitor thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,287 | INFO     | [job] retrieve thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,458 | INFO     | all job control threads have been joined
[2025-12-17 16:48:54] 2025-12-17 15:48:25,626 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,662 | INFO     | [job] job monitor thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,786 | INFO     | [job] validate thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,845 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,906 | INFO     | [data] control thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,921 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:25,934 | INFO     | [payload] failed_post thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:26,134 | INFO     | [data] copytool_in thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:26,141 | INFO     | [payload] control thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:26,289 | INFO     | [data] copytool_out thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:26,463 | INFO     | [job] control thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:26,485 | INFO     | [payload] validate_post thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:26,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 16:48:54] 2025-12-17 15:48:30,631 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:34,944 | INFO     | job.realtimelogging is not enabled
[2025-12-17 16:48:54] 2025-12-17 15:48:35,949 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 16:48:54] 2025-12-17 15:48:36,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838072424256)>', '<ExcThread(monitor, started 139837130655488)>']
[2025-12-17 16:48:54] 2025-12-17 15:48:41,034 | INFO     | all workflow threads have been joined
[2025-12-17 16:48:54] 2025-12-17 15:48:41,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 16:48:54] 2025-12-17 15:48:41,034 | INFO     | traces error code: 0
[2025-12-17 16:48:54] 2025-12-17 15:48:41,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | INFO     | PID=984408 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | INFO     | .. there are 4 such processes running
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 16:48:54] 2025-12-17 15:48:54,787 | INFO     | [monitor] control thread has ended
[2025-12-17 16:48:54] 2025-12-17 15:48:54,842 [wrapper] ==== pilot stdout END ====
[2025-12-17 16:48:54] 2025-12-17 15:48:54,844 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 16:48:54] 2025-12-17 15:48:54,845 [wrapper] pilotpid: 984408
[2025-12-17 16:48:54] 2025-12-17 15:48:54,846 [wrapper] Pilot exit status: 0
[2025-12-17 16:48:54] 2025-12-17 15:48:54,851 [wrapper] pandaids: 6932079930
[2025-12-17 16:48:54] 2025-12-17 15:48:54,867 [wrapper] cleanup supervisor_pilot 1055011 984409
[2025-12-17 16:48:54] 2025-12-17 15:48:54,868 [wrapper] Test setup, not cleaning
[2025-12-17 16:48:54] 2025-12-17 15:48:54,869 [wrapper] apfmon messages muted
[2025-12-17 16:48:54] 2025-12-17 15:48:54,870 [wrapper] ==== wrapper stdout END ====
[2025-12-17 16:48:54] 2025-12-17 15:48:54,871 [wrapper] ==== wrapper stderr END ====
[2025-12-17 16:48:54]  *** Error codes and diagnostics ***
[2025-12-17 16:48:54]     "exeErrorCode": 0,
[2025-12-17 16:48:54]     "exeErrorDiag": "",
[2025-12-17 16:48:54]     "pilotErrorCode": 0,
[2025-12-17 16:48:54]     "pilotErrorDiag": "",
[2025-12-17 16:48:54]  *** Listing of results directory ***
[2025-12-17 16:48:54] total 400092
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc    579449 Dec 17 04:48 pilot3.tar.gz
[2025-12-17 16:48:54] -rwx------ 1 boinc boinc     36322 Dec 17 04:49 runpilot2-wrapper.sh
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc      5112 Dec 17 04:50 queuedata.json
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc       100 Dec 17 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 16:48:54] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 16:18 run_atlas
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc       105 Dec 17 16:18 job.xml
[2025-12-17 16:48:54] -rw-r--r-- 2 boinc boinc     15847 Dec 17 16:18 start_atlas.sh
[2025-12-17 16:48:54] drwxrwx--x 2 boinc boinc        68 Dec 17 16:18 shared
[2025-12-17 16:48:54] -rw-r--r-- 2 boinc boinc    592376 Dec 17 16:18 input.tar.gz
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc      9189 Dec 17 16:18 init_data.xml
[2025-12-17 16:48:54] -rw-r--r-- 2 boinc boinc 195813170 Dec 17 16:18 EVNT.47905888._000014.pool.root.1
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc         0 Dec 17 16:18 boinc_setup_complete
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc         0 Dec 17 16:18 boinc_lockfile
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc      2444 Dec 17 16:18 pandaJob.out
[2025-12-17 16:48:54] -rw------- 1 boinc boinc    987423 Dec 17 16:18 agis_schedconf.cvmfs.json
[2025-12-17 16:48:54] -rw------- 1 boinc boinc   1516240 Dec 17 16:18 agis_ddmendpoints.agis.ALL.json
[2025-12-17 16:48:54] drwx------ 5 boinc boinc      4096 Dec 17 16:18 pilot3
[2025-12-17 16:48:54] -rw------- 1 boinc boinc 208715917 Dec 17 16:47 HITS.47905890._000377.pool.root.1
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc       529 Dec 17 16:48 boinc_task_state.xml
[2025-12-17 16:48:54] -rw------- 1 boinc boinc      1030 Dec 17 16:48 memory_monitor_summary.json
[2025-12-17 16:48:54] -rw------- 1 boinc boinc    329887 Dec 17 16:48 log.47905890._000377.job.log.tgz.1
[2025-12-17 16:48:54] -rw------- 1 boinc boinc      7780 Dec 17 16:48 heartbeat.json
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc        27 Dec 17 16:48 wrapper_checkpoint.txt
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc      8192 Dec 17 16:48 boinc_mmap_file
[2025-12-17 16:48:54] -rw------- 1 boinc boinc        95 Dec 17 16:48 pilot_heartbeat.json
[2025-12-17 16:48:54] -rw------- 1 boinc boinc       821 Dec 17 16:48 pilotlog.txt
[2025-12-17 16:48:54] -rw------- 1 boinc boinc    301122 Dec 17 16:48 log.47905890._000377.job.log.1
[2025-12-17 16:48:54] -rw------- 1 boinc boinc       357 Dec 17 16:48 output.list
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc       620 Dec 17 16:48 runtime_log
[2025-12-17 16:48:54] -rw------- 1 boinc boinc    655360 Dec 17 16:48 result.tar.gz
[2025-12-17 16:48:54] -rw------- 1 boinc boinc       638 Dec 17 16:48 V11LDm3ixp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4mWKDmYE2fYm.diag
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc      8765 Dec 17 16:48 runtime_log.err
[2025-12-17 16:48:54] -rw-r--r-- 1 boinc boinc     22531 Dec 17 16:48 stderr.txt
[2025-12-17 16:48:54] HITS file was successfully produced:
[2025-12-17 16:48:54] -rw------- 1 boinc boinc 208715917 Dec 17 16:47 shared/HITS.pool.root.1
[2025-12-17 16:48:54]  *** Contents of shared directory: ***
[2025-12-17 16:48:54] total 396288
[2025-12-17 16:48:54] -rw-r--r-- 2 boinc boinc     15847 Dec 17 16:18 start_atlas.sh
[2025-12-17 16:48:54] -rw-r--r-- 2 boinc boinc    592376 Dec 17 16:18 input.tar.gz
[2025-12-17 16:48:54] -rw-r--r-- 2 boinc boinc 195813170 Dec 17 16:18 ATLAS.root_0
[2025-12-17 16:48:54] -rw------- 1 boinc boinc 208715917 Dec 17 16:47 HITS.pool.root.1
[2025-12-17 16:48:54] -rw------- 1 boinc boinc    655360 Dec 17 16:48 result.tar.gz
16:48:56 (980514): run_atlas exited; CPU time 18997.654059
16:48:56 (980514): called boinc_finish(0)

</stderr_txt>
]]>

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