Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:21 (8895): wrapper (7.7.26015): starting
10:31:21 (8895): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 10:31:21] Arguments: --nthreads 8
[2025-12-17 10:31:21] Threads: 8
[2025-12-17 10:31:21] Checking for CVMFS
[2025-12-17 10:31:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 10:31:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 10:31:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 10:31:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 10:31:22] 2.13.3.0 14106 60424 236200 154112 3 1123 39018969 40960001 33549 16776704 0 818813534 99.724 595865333 47076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 10:31:22] CVMFS is ok
[2025-12-17 10:31:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 10:31:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 10:31:22] Further information can be found at the LHC@home message board.
[2025-12-17 10:31:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 10:31:22] Checking for apptainer binary...
[2025-12-17 10:31:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 10:31:22] Running /usr/bin/apptainer --version
[2025-12-17 10:31:22] apptainer version 1.4.5-2.el9
[2025-12-17 10:31:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 10:31:23] c8-7-5.aglt2.org
[2025-12-17 10:31:23] apptainer works
[2025-12-17 10:31:23] Set ATHENA_PROC_NUMBER=8
[2025-12-17 10:31:23] Set ATHENA_CORE_NUMBER=8
[2025-12-17 10:31:23] Starting ATLAS job with PandaID=6932080389
[2025-12-17 10:31:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 12:42:13]  *** The last 200 lines of the pilot log: ***
[2025-12-17 12:42:14] 2025-12-17 17:41:39,809 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 12:42:14] 2025-12-17 17:41:39,814 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9905546875
[2025-12-17 12:42:14] 2025-12-17 17:41:39,831 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6932080389/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,832 | INFO     | extracted standard info from prmon json
[2025-12-17 12:42:14] 2025-12-17 17:41:39,832 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 12:42:14] 2025-12-17 17:41:39,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 12:42:14] 2025-12-17 17:41:39,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 12:42:14] 2025-12-17 17:41:39,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 12:42:14] 2025-12-17 17:41:39,834 | INFO     | fitting pss+swap vs Time
[2025-12-17 12:42:14] 2025-12-17 17:41:39,834 | INFO     | sum of square deviations: 591169612.4838698
[2025-12-17 12:42:14] 2025-12-17 17:41:39,834 | INFO     | sum of deviations: 51541135497.04839
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | mean x: 1765989471.564516
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | mean y: 2402698.556451613
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | intersect: -153965427714.49805
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | chi2: 6.644560713421674
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | sum of square deviations: 522500997.4621858
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | sum of deviations: 58208024448.26893
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | mean x: 1765989319.067227
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | mean y: 2416903.9663865548
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | intersect: -196733570125.5825
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | chi2: 5.912935715829292
[2025-12-17 12:42:14] 2025-12-17 17:41:39,835 | INFO     | current chi2=5.912935715829292 (change=11.010885883163606 %)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,836 | INFO     | right removable region: 118
[2025-12-17 12:42:14] 2025-12-17 17:41:39,836 | INFO     | sum of square deviations: 522496117.4621858
[2025-12-17 12:42:14] 2025-12-17 17:41:39,836 | INFO     | sum of deviations: 10026451202.260494
[2025-12-17 12:42:14] 2025-12-17 17:41:39,836 | INFO     | mean x: 1765989624.067227
[2025-12-17 12:42:14] 2025-12-17 17:41:39,836 | INFO     | mean y: 2494797.092436975
[2025-12-17 12:42:14] 2025-12-17 17:41:39,836 | INFO     | intersect: -33886003504.887524
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | chi2: 1.8658166493079742
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | current chi2=1.8658166493079742 (change=71.91963878757072 %)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | sum of square deviations: 459357609.93859726
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | sum of deviations: -7573776581.1228075
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | mean x: 1765989776.5701754
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | mean y: 2536775.1403508773
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | intersect: 29119746815.651863
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | chi2: 0.8647091923327062
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | current chi2=0.8647091923327062 (change=53.65518939637375 %)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,837 | INFO     | sum of square deviations: 401521527.4128451
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | sum of deviations: -9702036390.486237
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | mean x: 1765989929.0733945
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | mean y: 2542280.9357798165
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | intersect: 42674472395.12213
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | chi2: 0.8363581204290942
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | current chi2=0.8363581204290942 (change=3.2786828398493064 %)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | left removable region: 30
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | sum of square deviations: 211282411.59090862
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | sum of deviations: -2713093506.886363
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | mean x: 1765990203.5681818
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | mean y: 2570602.397727273
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | intersect: 22679785039.928917
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | chi2: 0.007306390985130966
[2025-12-17 12:42:14] 2025-12-17 17:41:39,838 | INFO     | current memory leak: -12.84 B/s (using 88 data points, chi2=0.01)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | ..............................
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . Timing measurements:
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . get job = 0 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . initial setup = 5 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . payload setup = 44 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . stage-in = 0 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . payload execution = 7585 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . stage-out = 1 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | . log creation = 1 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,839 | INFO     | ..............................
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | 
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | job summary report
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | --------------------------------------------------
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | PanDA job id: 6932080389
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | task id: 47905899
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | errors: (none)
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | pilot state: finished 
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | transexitcode: 0
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | exeerrorcode: 0
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | exeerrordiag: 
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | exitcode: 0
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | exitmsg: OK
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | cpuconsumptiontime: 32963 s
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | nevents: 400
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | neventsw: 0
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | pid: 54208
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | pgrp: 54208
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | corecount: 8
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | event service: False
[2025-12-17 12:42:14] 2025-12-17 17:41:39,983 | INFO     | sizes: {0: 2283743, 1: 2283942, 12: 2283942, 23: 2283970, 33: 2283998, 35: 2284316, 44: 2284472, 7634: 2312017, 7636: 2321015, 7637: 2321071, 7658: 2321265}
[2025-12-17 12:42:14] 2025-12-17 17:41:39,984 | INFO     | --------------------------------------------------
[2025-12-17 12:42:14] 2025-12-17 17:41:39,984 | INFO     | 
[2025-12-17 12:42:14] 2025-12-17 17:41:39,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | job 6932080389 has completed (purged errors)
[2025-12-17 12:42:14] 2025-12-17 17:41:40,003 | INFO     | overall cleanup function is called
[2025-12-17 12:42:14] 2025-12-17 17:41:41,020 | INFO     | --- collectZombieJob: --- 10, [54208]
[2025-12-17 12:42:14] 2025-12-17 17:41:41,020 | INFO     | zombie collector waiting for pid 54208
[2025-12-17 12:42:14] 2025-12-17 17:41:41,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 12:42:14] 2025-12-17 17:41:41,020 | INFO     | collected zombie processes
[2025-12-17 12:42:14] 2025-12-17 17:41:41,020 | INFO     | will attempt to kill all subprocesses of pid=54208
[2025-12-17 12:42:14] 2025-12-17 17:41:41,737 | INFO     | process IDs to be killed: [54208] (in reverse order)
[2025-12-17 12:42:14] 2025-12-17 17:41:41,965 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 12:42:14] 2025-12-17 17:41:41,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 12:42:14] 2025-12-17 17:41:41,999 | INFO     | did not find any defunct processes belonging to 54208
[2025-12-17 12:42:14] 2025-12-17 17:41:42,023 | INFO     | did not find any defunct processes belonging to 54208
[2025-12-17 12:42:14] 2025-12-17 17:41:42,023 | INFO     | ready for new job
[2025-12-17 12:42:14] 2025-12-17 17:41:42,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 12:42:14] 2025-12-17 17:41:42,024 | INFO     | ***************************************
[2025-12-17 12:42:14] 2025-12-17 17:41:42,024 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 12:42:14] 2025-12-17 17:41:42,025 | INFO     | ***************************************
[2025-12-17 12:42:14] 2025-12-17 17:41:42,025 | INFO     | 
[2025-12-17 12:42:14] 2025-12-17 17:41:42,029 | INFO     | architecture information:
[2025-12-17 12:42:14] 2025-12-17 17:41:42,029 | INFO     | executing command: cat /etc/os-release
[2025-12-17 12:42:14] 2025-12-17 17:41:42,105 | INFO     | cat /etc/os-release:
[2025-12-17 12:42:14] NAME="CentOS Linux"
[2025-12-17 12:42:14] VERSION="7 (Core)"
[2025-12-17 12:42:14] ID="centos"
[2025-12-17 12:42:14] ID_LIKE="rhel fedora"
[2025-12-17 12:42:14] VERSION_ID="7"
[2025-12-17 12:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 12:42:14] ANSI_COLOR="0;31"
[2025-12-17 12:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 12:42:14] HOME_URL="https://www.centos.org/"
[2025-12-17 12:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 12:42:14] 
[2025-12-17 12:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 12:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 12:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 12:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 12:42:14] 
[2025-12-17 12:42:14] 2025-12-17 17:41:42,105 | INFO     | ***************************************
[2025-12-17 12:42:14] 2025-12-17 17:41:42,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-17 12:42:14] 2025-12-17 17:41:42,707 | INFO     | sufficient remaining disk space (170350608384 B)
[2025-12-17 12:42:14] 2025-12-17 17:41:42,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 12:42:14] 2025-12-17 17:41:42,707 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 12:42:14] 2025-12-17 17:41:42,707 | INFO     | update_server=False
[2025-12-17 12:42:14] 2025-12-17 17:41:42,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 12:42:14] 2025-12-17 17:41:42,840 | INFO     | all payload control threads have been joined
[2025-12-17 12:42:14] 2025-12-17 17:41:42,867 | INFO     | all job control threads have been joined
[2025-12-17 12:42:14] 2025-12-17 17:41:43,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:42:14] 2025-12-17 17:41:43,250 | INFO     | aborting loop
[2025-12-17 12:42:14] 2025-12-17 17:41:43,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 12:42:14] 2025-12-17 17:41:43,419 | INFO     | all data control threads have been joined
[2025-12-17 12:42:14] 2025-12-17 17:41:43,714 | INFO     | [job] retrieve thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:43,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 12:42:14] 2025-12-17 17:41:43,747 | INFO     | [payload] failed_post thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:43,754 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:43,846 | INFO     | [payload] control thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:43,875 | INFO     | [job] control thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,006 | INFO     | [data] copytool_in thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,010 | INFO     | [payload] validate_post thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,018 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,258 | INFO     | [job] job monitor thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,424 | INFO     | [data] control thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:42:14] 2025-12-17 17:41:44,996 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:44,998 | INFO     | [job] validate thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:45,738 | INFO     | [data] copytool_out thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:45,914 | INFO     | [job] queue monitor thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:47,380 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:53,394 | INFO     | job.realtimelogging is not enabled
[2025-12-17 12:42:14] 2025-12-17 17:41:54,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 12:42:14] 2025-12-17 17:41:57,274 | INFO     | [monitor] cgroup control has ended
[2025-12-17 12:42:14] 2025-12-17 17:41:58,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998791227200)>', '<ExcThread(monitor, started 139998066104064)>']
[2025-12-17 12:42:14] 2025-12-17 17:42:03,857 | INFO     | all workflow threads have been joined
[2025-12-17 12:42:14] 2025-12-17 17:42:03,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 12:42:14] 2025-12-17 17:42:03,857 | INFO     | traces error code: 0
[2025-12-17 12:42:14] 2025-12-17 17:42:03,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 12:42:14] 2025-12-17 17:42:12,881 | INFO     | PID=23398 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 12:42:14] 2025-12-17 17:42:12,881 | INFO     | .. there are 39 such processes running
[2025-12-17 12:42:14] 2025-12-17 17:42:12,881 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 12:42:14] 2025-12-17 17:42:12,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 12:42:14] 2025-12-17 17:42:12,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 12:42:14] 2025-12-17 17:42:12,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 12:42:14] 2025-12-17 17:42:12,882 | CRITICAL | thread 'MainThread' is not alive
[2025-12-17 12:42:14] 2025-12-17 17:42:12,882 | INFO     | [monitor] control thread has ended
[2025-12-17 12:42:14] 2025-12-17 17:42:13,230 [wrapper] ==== pilot stdout END ====
[2025-12-17 12:42:14] 2025-12-17 17:42:13,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 12:42:14] 2025-12-17 17:42:13,234 [wrapper] pilotpid: 23398
[2025-12-17 12:42:14] 2025-12-17 17:42:13,235 [wrapper] Pilot exit status: 0
[2025-12-17 12:42:14] 2025-12-17 17:42:13,376 [wrapper] pandaids: 6932080389
[2025-12-17 12:42:14] 2025-12-17 17:42:13,603 [wrapper] cleanup supervisor_pilot  966441 23399
[2025-12-17 12:42:14] 2025-12-17 17:42:13,610 [wrapper] Test setup, not cleaning
[2025-12-17 12:42:14] 2025-12-17 17:42:13,612 [wrapper] apfmon messages muted
[2025-12-17 12:42:14] 2025-12-17 17:42:13,613 [wrapper] ==== wrapper stdout END ====
[2025-12-17 12:42:14] 2025-12-17 17:42:13,615 [wrapper] ==== wrapper stderr END ====
[2025-12-17 12:42:14]  *** Error codes and diagnostics ***
[2025-12-17 12:42:14]     "exeErrorCode": 0,
[2025-12-17 12:42:14]     "exeErrorDiag": "",
[2025-12-17 12:42:14]     "pilotErrorCode": 0,
[2025-12-17 12:42:14]     "pilotErrorDiag": "",
[2025-12-17 12:42:14]  *** Listing of results directory ***
[2025-12-17 12:42:14] total 396976
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 12:42:14] -rwx------. 1 boincer umatlas     36322 Dec 16 22:50 runpilot2-wrapper.sh
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas       100 Dec 17 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 12:42:14] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 10:31 run_atlas
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas       105 Dec 17 10:31 job.xml
[2025-12-17 12:42:14] -rw-r--r--. 2 boincer umatlas 200444942 Dec 17 10:31 EVNT.47905897._000008.pool.root.1
[2025-12-17 12:42:14] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:31 start_atlas.sh
[2025-12-17 12:42:14] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 10:31 shared
[2025-12-17 12:42:14] -rw-r--r--. 2 boincer umatlas    592382 Dec 17 10:31 input.tar.gz
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas         0 Dec 17 10:31 boinc_lockfile
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas      2482 Dec 17 10:31 pandaJob.out
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas        57 Dec 17 10:31 setup.sh.local
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas    987423 Dec 17 10:32 agis_schedconf.cvmfs.json
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas   1516240 Dec 17 10:32 agis_ddmendpoints.agis.ALL.json
[2025-12-17 12:42:14] drwx------. 5 boincer umatlas      4096 Dec 17 10:32 pilot3
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas      7172 Dec 17 12:38 init_data.xml
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas 199417994 Dec 17 12:39 HITS.47905899._000188.pool.root.1
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas       529 Dec 17 12:40 boinc_task_state.xml
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas      1059 Dec 17 12:41 memory_monitor_summary.json
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas    364359 Dec 17 12:41 log.47905899._000188.job.log.tgz.1
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas        95 Dec 17 12:41 pilot_heartbeat.json
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas      7778 Dec 17 12:41 heartbeat.json
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 12:42 boinc_mmap_file
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas        27 Dec 17 12:42 wrapper_checkpoint.txt
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas       891 Dec 17 12:42 pilotlog.txt
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas   1002175 Dec 17 12:42 log.47905899._000188.job.log.1
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas       357 Dec 17 12:42 output.list
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas       620 Dec 17 12:42 runtime_log
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas   1382400 Dec 17 12:42 result.tar.gz
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas      9332 Dec 17 12:42 runtime_log.err
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas       654 Dec 17 12:42 dlRNDmDjxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxJbKDmda9Ofm.diag
[2025-12-17 12:42:14] -rw-r--r--. 1 boincer umatlas     21137 Dec 17 12:42 stderr.txt
[2025-12-17 12:42:14] HITS file was successfully produced:
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas 199417994 Dec 17 12:39 shared/HITS.pool.root.1
[2025-12-17 12:42:14]  *** Contents of shared directory: ***
[2025-12-17 12:42:14] total 392448
[2025-12-17 12:42:14] -rw-r--r--. 2 boincer umatlas 200444942 Dec 17 10:31 ATLAS.root_0
[2025-12-17 12:42:14] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 10:31 start_atlas.sh
[2025-12-17 12:42:14] -rw-r--r--. 2 boincer umatlas    592382 Dec 17 10:31 input.tar.gz
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas 199417994 Dec 17 12:39 HITS.pool.root.1
[2025-12-17 12:42:14] -rw-------. 1 boincer umatlas   1382400 Dec 17 12:42 result.tar.gz
12:42:15 (8895): run_atlas exited; CPU time 33151.413222
12:42:15 (8895): called boinc_finish(0)

</stderr_txt>
]]>

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