Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:38:45 (4026702): wrapper (7.7.26015): starting
17:38:45 (4026702): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 17:38:45] Arguments: --nthreads 4
[2025-12-17 17:38:45] Threads: 4
[2025-12-17 17:38:45] Checking for CVMFS
[2025-12-17 17:38:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 17:38:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 17:38:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 17:38:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 17:38:45] 2.13.1.0 1102998 3930 98128 154112 0 188 5190023 10240000 1822 130560 0 6860068 99.996 137695 248 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 17:38:45] CVMFS is ok
[2025-12-17 17:38:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 17:38:46] Checking for apptainer binary...
[2025-12-17 17:38:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 17:38:46] Running /usr/bin/apptainer --version
[2025-12-17 17:38:46] apptainer version 1.4.2
[2025-12-17 17:38:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 17:38:46] julianoldvlneu
[2025-12-17 17:38:46] apptainer works
[2025-12-17 17:38:46] Set ATHENA_PROC_NUMBER=4
[2025-12-17 17:38:46] Set ATHENA_CORE_NUMBER=4
[2025-12-17 17:38:46] Starting ATLAS job with PandaID=6934354555
[2025-12-17 17:38:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 19:09:38]  *** The last 200 lines of the pilot log: ***
[2025-12-17 19:09:38] 2025-12-17 18:08:50,905 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6934354555/HITS.47898896._002489.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-17 19:09:38] 2025-12-17 18:08:50,905 | INFO     | total size of present files: 0 B (workdir size: 2295657 B)
[2025-12-17 19:09:38] 2025-12-17 18:08:50,905 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6934354555/HITS.47898896._002489.pool.root.1 since it does not exist
[2025-12-17 19:09:38] 2025-12-17 18:08:51,153 | INFO     | number of running child processes to parent process 4037217: 1
[2025-12-17 19:09:38] 2025-12-17 18:08:51,153 | INFO     | maximum number of monitored processes: 6
[2025-12-17 19:09:38] 2025-12-17 18:08:52,340 | INFO     | time since job start (5385s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:08:52,672 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 19:09:38] 2025-12-17 18:08:53,657 | INFO     | monitor loop #398: job 0:6934354555 is in state 'finished'
[2025-12-17 19:09:38] 2025-12-17 18:08:53,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:09:38] 2025-12-17 18:08:54,343 | INFO     | time since job start (5387s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:08:54,605 | INFO     | job 6934354555 has state=finished
[2025-12-17 19:09:38] 2025-12-17 18:08:54,605 | INFO     | preparing for final server update for job 6934354555 in state='finished'
[2025-12-17 19:09:38] 2025-12-17 18:08:54,606 | INFO     | this job has now completed (state=finished)
[2025-12-17 19:09:38] 2025-12-17 18:08:54,606 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 19:09:38] 2025-12-17 18:08:54,606 | INFO     | log transfer has been attempted: DONE
[2025-12-17 19:09:38] 2025-12-17 18:08:54,606 | INFO     | job 6934354555 has finished - writing final server update
[2025-12-17 19:09:38] 2025-12-17 18:08:54,606 | INFO     | total number of processed events: 400 (read)
[2025-12-17 19:09:38] 2025-12-17 18:08:54,608 | INFO     | executing command: lscpu
[2025-12-17 19:09:38] 2025-12-17 18:08:54,651 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 19:09:38] 2025-12-17 18:08:55,664 | INFO     | PID=4030560 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 19:09:38] 2025-12-17 18:08:55,665 | INFO     | .. there are 3 such processes running
[2025-12-17 19:09:38] 2025-12-17 18:08:56,162 | INFO     | monitor loop #399: job 0:6934354555 is in state 'finished'
[2025-12-17 19:09:38] 2025-12-17 18:08:56,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:09:38] 2025-12-17 18:08:56,666 | INFO     | time since job start (5389s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:08:56,666 | INFO     | 5391s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 19:09:38] 2025-12-17 18:08:58,666 | INFO     | monitor loop #400: job 0:6934354555 is in state 'finished'
[2025-12-17 19:09:38] 2025-12-17 18:08:58,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:09:38] 2025-12-17 18:08:58,672 | INFO     | time since job start (5391s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:09:00,679 | INFO     | time since job start (5393s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:09:01,171 | INFO     | monitor loop #401: job 0:6934354555 is in state 'finished'
[2025-12-17 19:09:38] 2025-12-17 18:09:01,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:09:38] 2025-12-17 18:09:02,685 | INFO     | time since job start (5395s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:09:03,676 | INFO     | monitor loop #402: job 0:6934354555 is in state 'finished'
[2025-12-17 19:09:38] 2025-12-17 18:09:03,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:09:38] 2025-12-17 18:09:04,055 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-12-17 19:09:38] 2025-12-17 18:09:04,691 | INFO     | time since job start (5397s) is within the limit (174528.0s)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,120 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 19:09:38] 2025-12-17 18:09:05,122 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3800.0099999999998
[2025-12-17 19:09:38] 2025-12-17 18:09:05,124 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6934354555/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,125 | INFO     | extracted standard info from prmon json
[2025-12-17 19:09:38] 2025-12-17 18:09:05,125 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 19:09:38] 2025-12-17 18:09:05,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 19:09:38] 2025-12-17 18:09:05,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 19:09:38] 2025-12-17 18:09:05,126 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 19:09:38] 2025-12-17 18:09:05,127 | INFO     | fitting pss+swap vs Time
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | sum of square deviations: 164765880.0
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | sum of deviations: -5288027230.999995
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | mean x: 1765992335.0
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | mean y: 2378997.6790123456
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | intersect: 56680470100.140686
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | chi2: 0.02473091053266652
[2025-12-17 19:09:38] 2025-12-17 18:09:05,128 | INFO     | current memory leak: -32.09 B/s (using 81 data points, chi2=0.02)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | ..............................
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . Timing measurements:
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . get job = 0 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . initial setup = 2 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . payload setup = 12 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . stage-in = 0 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . payload execution = 5349 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . stage-out = 0 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | . log creation = 0 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,129 | INFO     | ..............................
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | 
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | job summary report
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | --------------------------------------------------
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | PanDA job id: 6934354555
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | task id: 47898896
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | errors: (none)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 19:09:38] 2025-12-17 18:09:05,190 | INFO     | pilot state: finished 
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | transexitcode: 0
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | exeerrorcode: 0
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | exeerrordiag: 
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | exitcode: 0
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | exitmsg: OK
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | cpuconsumptiontime: 20104 s
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | nevents: 400
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | neventsw: 0
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | pid: 4037217
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | pgrp: 4037217
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | corecount: 4
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | event service: False
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | sizes: {0: 2283790, 1: 2283989, 10: 2284251, 11: 2284279, 5362: 2310825, 5363: 2319851, 5366: 2320063, 5378: 2320257}
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | --------------------------------------------------
[2025-12-17 19:09:38] 2025-12-17 18:09:05,191 | INFO     | 
[2025-12-17 19:09:38] 2025-12-17 18:09:05,192 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-12-17 19:09:38] 2025-12-17 18:09:05,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 19:09:38] 2025-12-17 18:09:05,230 | INFO     | job 6934354555 has completed (purged errors)
[2025-12-17 19:09:38] 2025-12-17 18:09:05,230 | INFO     | overall cleanup function is called
[2025-12-17 19:09:38] 2025-12-17 18:09:06,239 | INFO     | --- collectZombieJob: --- 10, [4037217]
[2025-12-17 19:09:38] 2025-12-17 18:09:06,239 | INFO     | zombie collector waiting for pid 4037217
[2025-12-17 19:09:38] 2025-12-17 18:09:06,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 19:09:38] 2025-12-17 18:09:06,240 | INFO     | collected zombie processes
[2025-12-17 19:09:38] 2025-12-17 18:09:06,240 | INFO     | will attempt to kill all subprocesses of pid=4037217
[2025-12-17 19:09:38] 2025-12-17 18:09:06,486 | INFO     | process IDs to be killed: [4037217] (in reverse order)
[2025-12-17 19:09:38] 2025-12-17 18:09:06,593 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 19:09:38] 2025-12-17 18:09:06,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 19:09:38] 2025-12-17 18:09:06,603 | INFO     | did not find any defunct processes belonging to 4037217
[2025-12-17 19:09:38] 2025-12-17 18:09:06,614 | INFO     | did not find any defunct processes belonging to 4037217
[2025-12-17 19:09:38] 2025-12-17 18:09:06,615 | INFO     | ready for new job
[2025-12-17 19:09:38] 2025-12-17 18:09:06,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 19:09:38] 2025-12-17 18:09:06,618 | INFO     | ***************************************
[2025-12-17 19:09:38] 2025-12-17 18:09:06,618 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 19:09:38] 2025-12-17 18:09:06,618 | INFO     | ***************************************
[2025-12-17 19:09:38] 2025-12-17 18:09:06,618 | INFO     | 
[2025-12-17 19:09:38] 2025-12-17 18:09:06,619 | INFO     | pilot is running in a VM
[2025-12-17 19:09:38] 2025-12-17 18:09:06,619 | INFO     | architecture information:
[2025-12-17 19:09:38] 2025-12-17 18:09:06,619 | INFO     | executing command: cat /etc/os-release
[2025-12-17 19:09:38] 2025-12-17 18:09:06,643 | INFO     | cat /etc/os-release:
[2025-12-17 19:09:38] NAME="CentOS Linux"
[2025-12-17 19:09:38] VERSION="7 (Core)"
[2025-12-17 19:09:38] ID="centos"
[2025-12-17 19:09:38] ID_LIKE="rhel fedora"
[2025-12-17 19:09:38] VERSION_ID="7"
[2025-12-17 19:09:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 19:09:38] ANSI_COLOR="0;31"
[2025-12-17 19:09:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 19:09:38] HOME_URL="https://www.centos.org/"
[2025-12-17 19:09:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 19:09:38] 
[2025-12-17 19:09:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 19:09:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 19:09:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 19:09:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 19:09:38] 
[2025-12-17 19:09:38] 2025-12-17 18:09:06,643 | INFO     | ***************************************
[2025-12-17 19:09:38] 2025-12-17 18:09:07,147 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-12-17 19:09:38] 2025-12-17 18:09:07,171 | INFO     | sufficient remaining disk space (155118993408 B)
[2025-12-17 19:09:38] 2025-12-17 18:09:07,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 19:09:38] 2025-12-17 18:09:07,172 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 19:09:38] 2025-12-17 18:09:07,173 | INFO     | update_server=False
[2025-12-17 19:09:38] 2025-12-17 18:09:07,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 19:09:38] 2025-12-17 18:09:07,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:09:38] 2025-12-17 18:09:07,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:09:38] 2025-12-17 18:09:07,182 | INFO     | aborting loop
[2025-12-17 19:09:38] 2025-12-17 18:09:07,202 | INFO     | all payload control threads have been joined
[2025-12-17 19:09:38] 2025-12-17 18:09:07,759 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 19:09:38] 2025-12-17 18:09:07,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 19:09:38] 2025-12-17 18:09:08,002 | INFO     | all data control threads have been joined
[2025-12-17 19:09:38] 2025-12-17 18:09:08,179 | INFO     | [job] retrieve thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:08,180 | INFO     | [job] queue monitor thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:08,186 | INFO     | [job] job monitor thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:08,208 | INFO     | [payload] control thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:08,490 | INFO     | all job control threads have been joined
[2025-12-17 19:09:38] 2025-12-17 18:09:08,762 | INFO     | [job] validate thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:08,873 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:08,928 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,008 | INFO     | [data] control thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,125 | INFO     | [data] copytool_in thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,420 | INFO     | [payload] validate_post thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,496 | INFO     | [job] control thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,580 | INFO     | [payload] failed_post thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,662 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:09,853 | INFO     | [data] copytool_out thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:11,767 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:13,232 | INFO     | [monitor] cgroup control has ended
[2025-12-17 19:09:38] 2025-12-17 18:09:17,883 | INFO     | job.realtimelogging is not enabled
[2025-12-17 19:09:38] 2025-12-17 18:09:18,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 19:09:38] 2025-12-17 18:09:19,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129607707264832)>', '<ExcThread(monitor, started 129606401124096)>']
[2025-12-17 19:09:38] 2025-12-17 18:09:24,923 | INFO     | all workflow threads have been joined
[2025-12-17 19:09:38] 2025-12-17 18:09:24,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 19:09:38] 2025-12-17 18:09:24,924 | INFO     | traces error code: 0
[2025-12-17 19:09:38] 2025-12-17 18:09:24,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 19:09:38] 2025-12-17 18:09:38,075 | INFO     | PID=4030560 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 19:09:38] 2025-12-17 18:09:38,075 | INFO     | .. there are 3 such processes running
[2025-12-17 19:09:38] 2025-12-17 18:09:38,075 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 19:09:38] 2025-12-17 18:09:38,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 19:09:38] 2025-12-17 18:09:38,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 19:09:38] 2025-12-17 18:09:38,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 19:09:38] 2025-12-17 18:09:38,076 | INFO     | [monitor] control thread has ended
[2025-12-17 19:09:38] 2025-12-17 18:09:38,201 [wrapper] ==== pilot stdout END ====
[2025-12-17 19:09:38] 2025-12-17 18:09:38,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 19:09:38] 2025-12-17 18:09:38,218 [wrapper] pilotpid: 4030560
[2025-12-17 19:09:38] 2025-12-17 18:09:38,226 [wrapper] Pilot exit status: 0
[2025-12-17 19:09:38] 2025-12-17 18:09:38,254 [wrapper] pandaids: 6934354555
[2025-12-17 19:09:38] 2025-12-17 18:09:38,340 [wrapper] cleanup supervisor_pilot 4110456 4030561
[2025-12-17 19:09:38] 2025-12-17 18:09:38,348 [wrapper] Test setup, not cleaning
[2025-12-17 19:09:38] 2025-12-17 18:09:38,356 [wrapper] apfmon messages muted
[2025-12-17 19:09:38] 2025-12-17 18:09:38,364 [wrapper] ==== wrapper stdout END ====
[2025-12-17 19:09:38] 2025-12-17 18:09:38,372 [wrapper] ==== wrapper stderr END ====
[2025-12-17 19:09:38]  *** Error codes and diagnostics ***
[2025-12-17 19:09:38]     "exeErrorCode": 0,
[2025-12-17 19:09:38]     "exeErrorDiag": "",
[2025-12-17 19:09:38]     "pilotErrorCode": 0,
[2025-12-17 19:09:38]     "pilotErrorDiag": "",
[2025-12-17 19:09:38]  *** Listing of results directory ***
[2025-12-17 19:09:38] insgesamt 371820
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc    579449 Dez 17 09:37 pilot3.tar.gz
[2025-12-17 19:09:38] -rwx------ 1 yeti boinc     36322 Dez 17 09:40 runpilot2-wrapper.sh
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc      5112 Dez 17 09:42 queuedata.json
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc       100 Dez 17 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 19:09:38] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 17:38 run_atlas
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc       105 Dez 17 17:38 job.xml
[2025-12-17 19:09:38] -rw-r--r-- 2 yeti boinc 195671150 Dez 17 17:38 EVNT.47898894._000096.pool.root.1
[2025-12-17 19:09:38] -rw-r--r-- 2 yeti boinc     15847 Dez 17 17:38 start_atlas.sh
[2025-12-17 19:09:38] drwxrwx--x 2 yeti boinc      4096 Dez 17 17:38 shared
[2025-12-17 19:09:38] -rw-r--r-- 2 yeti boinc    592403 Dez 17 17:38 input.tar.gz
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc      6528 Dez 17 17:38 init_data.xml
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc         0 Dez 17 17:38 boinc_setup_complete
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc         0 Dez 17 17:38 boinc_lockfile
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc      2505 Dez 17 17:38 pandaJob.out
[2025-12-17 19:09:38] -rw------- 1 yeti boinc        52 Dez 17 17:38 setup.sh.local
[2025-12-17 19:09:38] -rw------- 1 yeti boinc    987423 Dez 17 17:39 agis_schedconf.cvmfs.json
[2025-12-17 19:09:38] -rw------- 1 yeti boinc   1516240 Dez 17 17:39 agis_ddmendpoints.agis.ALL.json
[2025-12-17 19:09:38] drwx------ 5 yeti boinc      4096 Dez 17 17:39 pilot3
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc       530 Dez 17 19:08 boinc_task_state.xml
[2025-12-17 19:09:38] -rw------- 1 yeti boinc 179043588 Dez 17 19:08 HITS.47898896._002489.pool.root.1
[2025-12-17 19:09:38] -rw------- 1 yeti boinc        95 Dez 17 19:08 pilot_heartbeat.json
[2025-12-17 19:09:38] -rw------- 1 yeti boinc      1019 Dez 17 19:08 memory_monitor_summary.json
[2025-12-17 19:09:38] -rw------- 1 yeti boinc    262327 Dez 17 19:08 log.47898896._002489.job.log.tgz.1
[2025-12-17 19:09:38] -rw------- 1 yeti boinc      7737 Dez 17 19:09 heartbeat.json
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc        27 Dez 17 19:09 wrapper_checkpoint.txt
[2025-12-17 19:09:38] -rw------- 1 yeti boinc       822 Dez 17 19:09 pilotlog.txt
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc      8192 Dez 17 19:09 boinc_mmap_file
[2025-12-17 19:09:38] -rw------- 1 yeti boinc    793359 Dez 17 19:09 log.47898896._002489.job.log.1
[2025-12-17 19:09:38] -rw------- 1 yeti boinc       357 Dez 17 19:09 output.list
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc       620 Dez 17 19:09 runtime_log
[2025-12-17 19:09:38] -rw------- 1 yeti boinc   1075200 Dez 17 19:09 result.tar.gz
[2025-12-17 19:09:38] -rw------- 1 yeti boinc       644 Dez 17 19:09 ZcpMDmeG2p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfobKDmSrEusm.diag
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc      9572 Dez 17 19:09 runtime_log.err
[2025-12-17 19:09:38] -rw-r--r-- 1 yeti boinc     22147 Dez 17 19:09 stderr.txt
[2025-12-17 19:09:38] HITS file was successfully produced:
[2025-12-17 19:09:38] -rw------- 1 yeti boinc 179043588 Dez 17 19:08 shared/HITS.pool.root.1
[2025-12-17 19:09:38]  *** Contents of shared directory: ***
[2025-12-17 19:09:38] insgesamt 367592
[2025-12-17 19:09:38] -rw-r--r-- 2 yeti boinc 195671150 Dez 17 17:38 ATLAS.root_0
[2025-12-17 19:09:38] -rw-r--r-- 2 yeti boinc     15847 Dez 17 17:38 start_atlas.sh
[2025-12-17 19:09:38] -rw-r--r-- 2 yeti boinc    592403 Dez 17 17:38 input.tar.gz
[2025-12-17 19:09:38] -rw------- 1 yeti boinc 179043588 Dez 17 19:08 HITS.pool.root.1
[2025-12-17 19:09:38] -rw------- 1 yeti boinc   1075200 Dez 17 19:09 result.tar.gz
19:09:40 (4026702): run_atlas exited; CPU time 20330.885852
19:09:40 (4026702): called boinc_finish(0)

</stderr_txt>
]]>

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