Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
18:32:56 (4061907): wrapper (7.7.26015): starting
18:32:56 (4061907): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 18:32:56] Arguments: --nthreads 4
[2025-12-17 18:32:56] Threads: 4
[2025-12-17 18:32:56] Checking for CVMFS
[2025-12-17 18:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 18:32:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 18:32:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 18:32:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 18:32:57] 2.13.1.0 1102998 3984 98820 154116 2 10 5206993 10240000 1822 130560 0 6942829 99.996 141483 233 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 18:32:57] CVMFS is ok
[2025-12-17 18:32:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 18:32:57] Checking for apptainer binary...
[2025-12-17 18:32:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 18:32:57] Running /usr/bin/apptainer --version
[2025-12-17 18:32:57] apptainer version 1.4.2
[2025-12-17 18:32:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 18:32:58] julianoldvlneu
[2025-12-17 18:32:58] apptainer works
[2025-12-17 18:32:58] Set ATHENA_PROC_NUMBER=4
[2025-12-17 18:32:58] Set ATHENA_CORE_NUMBER=4
[2025-12-17 18:32:58] Starting ATLAS job with PandaID=6934354557
[2025-12-17 18:32:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 20:05:37]  *** The last 200 lines of the pilot log: ***
[2025-12-17 20:05:37] 2025-12-17 19:04:19,663 | INFO     | transferring file log.47898896._002491.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6934354557/log.47898896._002491.job.log.tgz.1 to /var/li
[2025-12-17 20:05:37] 2025-12-17 19:04:19,663 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6934354557/log.47898896._002491.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-17 20:05:37] 2025-12-17 19:04:19,697 | INFO     | adding to output.list: log.47898896._002491.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/c5/log.47898896._002491.job.log.tg
[2025-12-17 20:05:37] 2025-12-17 19:04:19,700 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 20:05:37] 2025-12-17 19:04:19,700 | INFO     | summary of transferred files:
[2025-12-17 20:05:37] 2025-12-17 19:04:19,700 | INFO     |  -- lfn=log.47898896._002491.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 20:05:37] 2025-12-17 19:04:19,700 | INFO     | stage-out finished correctly
[2025-12-17 20:05:37] 2025-12-17 19:04:20,850 | INFO     | monitor loop #405: job 0:6934354557 is in state 'finished'
[2025-12-17 20:05:37] 2025-12-17 19:04:20,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:05:37] 2025-12-17 19:04:20,943 | INFO     | time since job start (5456s) is within the limit (174528.0s)
[2025-12-17 20:05:37] 2025-12-17 19:04:21,844 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 20:05:37] 2025-12-17 19:04:22,949 | INFO     | time since job start (5458s) is within the limit (174528.0s)
[2025-12-17 20:05:37] 2025-12-17 19:04:23,360 | INFO     | monitor loop #406: job 0:6934354557 is in state 'finished'
[2025-12-17 20:05:37] 2025-12-17 19:04:23,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:05:37] 2025-12-17 19:04:23,716 | INFO     | job 6934354557 has state=finished
[2025-12-17 20:05:37] 2025-12-17 19:04:23,716 | INFO     | preparing for final server update for job 6934354557 in state='finished'
[2025-12-17 20:05:37] 2025-12-17 19:04:24,343 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-17 20:05:37] 2025-12-17 19:04:24,343 | INFO     | this job has now completed (state=finished)
[2025-12-17 20:05:37] 2025-12-17 19:04:24,343 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 20:05:37] 2025-12-17 19:04:24,343 | INFO     | log transfer has been attempted: DONE
[2025-12-17 20:05:37] 2025-12-17 19:04:24,343 | INFO     | job 6934354557 has finished - writing final server update
[2025-12-17 20:05:37] 2025-12-17 19:04:24,343 | INFO     | total number of processed events: 400 (read)
[2025-12-17 20:05:37] 2025-12-17 19:04:24,344 | INFO     | executing command: lscpu
[2025-12-17 20:05:37] 2025-12-17 19:04:24,387 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 20:05:37] 2025-12-17 19:04:24,955 | INFO     | time since job start (5460s) is within the limit (174528.0s)
[2025-12-17 20:05:37] 2025-12-17 19:04:25,864 | INFO     | monitor loop #407: job 0:6934354557 is in state 'finished'
[2025-12-17 20:05:37] 2025-12-17 19:04:25,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:05:37] 2025-12-17 19:04:26,963 | INFO     | time since job start (5462s) is within the limit (174528.0s)
[2025-12-17 20:05:37] 2025-12-17 19:04:28,368 | INFO     | monitor loop #408: job 0:6934354557 is in state 'finished'
[2025-12-17 20:05:37] 2025-12-17 19:04:28,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:05:37] 2025-12-17 19:04:28,969 | INFO     | time since job start (5464s) is within the limit (174528.0s)
[2025-12-17 20:05:37] 2025-12-17 19:04:30,873 | INFO     | monitor loop #409: job 0:6934354557 is in state 'finished'
[2025-12-17 20:05:37] 2025-12-17 19:04:30,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 20:05:37] 2025-12-17 19:04:30,976 | INFO     | time since job start (5466s) is within the limit (174528.0s)
[2025-12-17 20:05:37] 2025-12-17 19:04:32,302 | INFO     | PID=4065761 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 20:05:37] 2025-12-17 19:04:32,302 | INFO     | .. there are 3 such processes running
[2025-12-17 20:05:37] 2025-12-17 19:04:33,088 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 20:05:37] 2025-12-17 19:04:33,089 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3800.0099999999998
[2025-12-17 20:05:37] 2025-12-17 19:04:33,092 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6934354557/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 20:05:37] 2025-12-17 19:04:33,093 | INFO     | extracted standard info from prmon json
[2025-12-17 20:05:37] 2025-12-17 19:04:33,093 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 20:05:37] 2025-12-17 19:04:33,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 20:05:37] 2025-12-17 19:04:33,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 20:05:37] 2025-12-17 19:04:33,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 20:05:37] 2025-12-17 19:04:33,095 | INFO     | fitting pss+swap vs Time
[2025-12-17 20:05:37] 2025-12-17 19:04:33,095 | INFO     | sum of square deviations: 170944600.5
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | sum of deviations: 475159652.5
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | mean x: 1765995623.5
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | mean y: 2321071.524390244
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | intersect: -4906461448.218203
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | chi2: 0.0031611189348101252
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | current memory leak: 2.78 B/s (using 82 data points, chi2=0.00)
[2025-12-17 20:05:37] 2025-12-17 19:04:33,096 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | ..............................
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . Timing measurements:
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . get job = 0 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . initial setup = 2 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . payload setup = 13 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . stage-in = 0 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . payload execution = 5418 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . stage-out = 0 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | . log creation = 0 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,097 | INFO     | ..............................
[2025-12-17 20:05:37] 2025-12-17 19:04:33,156 | INFO     | 
[2025-12-17 20:05:37] 2025-12-17 19:04:33,156 | INFO     | job summary report
[2025-12-17 20:05:37] 2025-12-17 19:04:33,156 | INFO     | --------------------------------------------------
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | PanDA job id: 6934354557
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | task id: 47898896
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | errors: (none)
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | pilot state: finished 
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | transexitcode: 0
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | exeerrorcode: 0
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | exeerrordiag: 
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | exitcode: 0
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | exitmsg: OK
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | cpuconsumptiontime: 20557 s
[2025-12-17 20:05:37] 2025-12-17 19:04:33,157 | INFO     | nevents: 400
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | neventsw: 0
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | pid: 4072408
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | pgrp: 4072408
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | corecount: 4
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | event service: False
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | sizes: {0: 2283792, 1: 2283991, 10: 2284253, 11: 2284281, 5435: 2310772, 5436: 2319798, 5438: 2319982, 5449: 2320176}
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | --------------------------------------------------
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | 
[2025-12-17 20:05:37] 2025-12-17 19:04:33,158 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 20:05:37] 2025-12-17 19:04:33,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 20:05:37] 2025-12-17 19:04:33,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 20:05:37] 2025-12-17 19:04:33,198 | INFO     | job 6934354557 has completed (purged errors)
[2025-12-17 20:05:37] 2025-12-17 19:04:33,198 | INFO     | overall cleanup function is called
[2025-12-17 20:05:37] 2025-12-17 19:04:34,206 | INFO     | --- collectZombieJob: --- 10, [4072408]
[2025-12-17 20:05:37] 2025-12-17 19:04:34,207 | INFO     | zombie collector waiting for pid 4072408
[2025-12-17 20:05:37] 2025-12-17 19:04:34,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 20:05:37] 2025-12-17 19:04:34,207 | INFO     | collected zombie processes
[2025-12-17 20:05:37] 2025-12-17 19:04:34,207 | INFO     | will attempt to kill all subprocesses of pid=4072408
[2025-12-17 20:05:37] 2025-12-17 19:04:34,449 | INFO     | process IDs to be killed: [4072408] (in reverse order)
[2025-12-17 20:05:37] 2025-12-17 19:04:34,556 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 20:05:37] 2025-12-17 19:04:34,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 20:05:37] 2025-12-17 19:04:34,564 | INFO     | did not find any defunct processes belonging to 4072408
[2025-12-17 20:05:37] 2025-12-17 19:04:34,570 | INFO     | did not find any defunct processes belonging to 4072408
[2025-12-17 20:05:37] 2025-12-17 19:04:34,570 | INFO     | ready for new job
[2025-12-17 20:05:37] 2025-12-17 19:04:34,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 20:05:37] 2025-12-17 19:04:34,574 | INFO     | ***************************************
[2025-12-17 20:05:37] 2025-12-17 19:04:34,574 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 20:05:37] 2025-12-17 19:04:34,574 | INFO     | ***************************************
[2025-12-17 20:05:37] 2025-12-17 19:04:34,574 | INFO     | 
[2025-12-17 20:05:37] 2025-12-17 19:04:34,575 | INFO     | pilot is running in a VM
[2025-12-17 20:05:37] 2025-12-17 19:04:34,575 | INFO     | architecture information:
[2025-12-17 20:05:37] 2025-12-17 19:04:34,576 | INFO     | executing command: cat /etc/os-release
[2025-12-17 20:05:37] 2025-12-17 19:04:34,599 | INFO     | cat /etc/os-release:
[2025-12-17 20:05:37] NAME="CentOS Linux"
[2025-12-17 20:05:37] VERSION="7 (Core)"
[2025-12-17 20:05:37] ID="centos"
[2025-12-17 20:05:37] ID_LIKE="rhel fedora"
[2025-12-17 20:05:37] VERSION_ID="7"
[2025-12-17 20:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 20:05:37] ANSI_COLOR="0;31"
[2025-12-17 20:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 20:05:37] HOME_URL="https://www.centos.org/"
[2025-12-17 20:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 20:05:37] 
[2025-12-17 20:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 20:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 20:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 20:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 20:05:37] 
[2025-12-17 20:05:37] 2025-12-17 19:04:34,600 | INFO     | ***************************************
[2025-12-17 20:05:37] 2025-12-17 19:04:35,104 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 20:05:37] 2025-12-17 19:04:35,128 | INFO     | sufficient remaining disk space (155483897856 B)
[2025-12-17 20:05:37] 2025-12-17 19:04:35,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 20:05:37] 2025-12-17 19:04:35,129 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 20:05:37] 2025-12-17 19:04:35,129 | INFO     | update_server=False
[2025-12-17 20:05:37] 2025-12-17 19:04:35,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 20:05:37] 2025-12-17 19:04:35,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:05:37] 2025-12-17 19:04:35,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:05:37] 2025-12-17 19:04:35,131 | INFO     | aborting loop
[2025-12-17 20:05:37] 2025-12-17 19:04:35,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 20:05:37] 2025-12-17 19:04:35,306 | INFO     | all payload control threads have been joined
[2025-12-17 20:05:37] 2025-12-17 19:04:35,776 | INFO     | all job control threads have been joined
[2025-12-17 20:05:37] 2025-12-17 19:04:36,085 | INFO     | all data control threads have been joined
[2025-12-17 20:05:37] 2025-12-17 19:04:36,135 | INFO     | [job] retrieve thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,136 | INFO     | [job] queue monitor thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,136 | INFO     | [job] job monitor thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,170 | INFO     | [payload] validate_post thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,312 | INFO     | [payload] control thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,404 | INFO     | [job] validate thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,484 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,674 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,753 | INFO     | [data] copytool_in thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,781 | INFO     | [job] control thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:36,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 20:05:37] 2025-12-17 19:04:37,090 | INFO     | [data] control thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:37,181 | INFO     | [payload] failed_post thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:37,296 | INFO     | [data] copytool_out thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:37,583 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:40,922 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:04:45,984 | INFO     | job.realtimelogging is not enabled
[2025-12-17 20:05:37] 2025-12-17 19:04:46,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 20:05:37] 2025-12-17 19:05:04,672 | INFO     | PID=4065761 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 20:05:37] 2025-12-17 19:05:04,672 | INFO     | .. there are 3 such processes running
[2025-12-17 20:05:37] 2025-12-17 19:05:04,673 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 20:05:37] 2025-12-17 19:05:04,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 20:05:37] 2025-12-17 19:05:04,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 20:05:37] 2025-12-17 19:05:30,724 | INFO     | [monitor] cgroup control has ended
[2025-12-17 20:05:37] 2025-12-17 19:05:31,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127043607988032)>', '<ExcThread(monitor, started 127042305648384)>']
[2025-12-17 20:05:37] 2025-12-17 19:05:31,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 20:05:37] 2025-12-17 19:05:31,817 | INFO     | [monitor] control thread has ended
[2025-12-17 20:05:37] 2025-12-17 19:05:36,752 | INFO     | all workflow threads have been joined
[2025-12-17 20:05:37] 2025-12-17 19:05:36,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 20:05:37] 2025-12-17 19:05:36,753 | INFO     | traces error code: 0
[2025-12-17 20:05:37] 2025-12-17 19:05:36,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 20:05:37] 2025-12-17 19:05:36,888 [wrapper] ==== pilot stdout END ====
[2025-12-17 20:05:37] 2025-12-17 19:05:36,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 20:05:37] 2025-12-17 19:05:36,904 [wrapper] pilotpid: 4065761
[2025-12-17 20:05:37] 2025-12-17 19:05:36,912 [wrapper] Pilot exit status: 0
[2025-12-17 20:05:37] 2025-12-17 19:05:36,943 [wrapper] pandaids: 6934354557
[2025-12-17 20:05:37] 2025-12-17 19:05:37,037 [wrapper] cleanup supervisor_pilot 4142151 4065762
[2025-12-17 20:05:37] 2025-12-17 19:05:37,046 [wrapper] Test setup, not cleaning
[2025-12-17 20:05:37] 2025-12-17 19:05:37,053 [wrapper] apfmon messages muted
[2025-12-17 20:05:37] 2025-12-17 19:05:37,061 [wrapper] ==== wrapper stdout END ====
[2025-12-17 20:05:37] 2025-12-17 19:05:37,069 [wrapper] ==== wrapper stderr END ====
[2025-12-17 20:05:37]  *** Error codes and diagnostics ***
[2025-12-17 20:05:37]     "exeErrorCode": 0,
[2025-12-17 20:05:37]     "exeErrorDiag": "",
[2025-12-17 20:05:37]     "pilotErrorCode": 0,
[2025-12-17 20:05:37]     "pilotErrorDiag": "",
[2025-12-17 20:05:37]  *** Listing of results directory ***
[2025-12-17 20:05:37] insgesamt 367908
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc    579449 Dez 17 09:37 pilot3.tar.gz
[2025-12-17 20:05:37] -rwx------ 1 yeti boinc     36322 Dez 17 09:40 runpilot2-wrapper.sh
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc      5112 Dez 17 09:42 queuedata.json
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc       100 Dez 17 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 20:05:37] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 18:32 run_atlas
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc       105 Dez 17 18:32 job.xml
[2025-12-17 20:05:37] -rw-r--r-- 2 yeti boinc 195671150 Dez 17 18:32 EVNT.47898894._000096.pool.root.1
[2025-12-17 20:05:37] -rw-r--r-- 2 yeti boinc     15847 Dez 17 18:32 start_atlas.sh
[2025-12-17 20:05:37] drwxrwx--x 2 yeti boinc      4096 Dez 17 18:32 shared
[2025-12-17 20:05:37] -rw-r--r-- 2 yeti boinc    592405 Dez 17 18:32 input.tar.gz
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc      6528 Dez 17 18:32 init_data.xml
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc         0 Dez 17 18:32 boinc_setup_complete
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc         0 Dez 17 18:32 boinc_lockfile
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc      2506 Dez 17 18:32 pandaJob.out
[2025-12-17 20:05:37] -rw------- 1 yeti boinc        52 Dez 17 18:32 setup.sh.local
[2025-12-17 20:05:37] -rw------- 1 yeti boinc    987432 Dez 17 18:33 agis_schedconf.cvmfs.json
[2025-12-17 20:05:37] -rw------- 1 yeti boinc   1516240 Dez 17 18:33 agis_ddmendpoints.agis.ALL.json
[2025-12-17 20:05:37] drwx------ 5 yeti boinc      4096 Dez 17 18:33 pilot3
[2025-12-17 20:05:37] -rw------- 1 yeti boinc 174993864 Dez 17 20:03 HITS.47898896._002491.pool.root.1
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc       530 Dez 17 20:03 boinc_task_state.xml
[2025-12-17 20:05:37] -rw------- 1 yeti boinc      1015 Dez 17 20:04 memory_monitor_summary.json
[2025-12-17 20:05:37] -rw------- 1 yeti boinc    267336 Dez 17 20:04 log.47898896._002491.job.log.tgz.1
[2025-12-17 20:05:37] -rw------- 1 yeti boinc      7733 Dez 17 20:04 heartbeat.json
[2025-12-17 20:05:37] -rw------- 1 yeti boinc        95 Dez 17 20:05 pilot_heartbeat.json
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc      8192 Dez 17 20:05 boinc_mmap_file
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc        27 Dez 17 20:05 wrapper_checkpoint.txt
[2025-12-17 20:05:37] -rw------- 1 yeti boinc      4972 Dez 17 20:05 pilotlog.txt
[2025-12-17 20:05:37] -rw------- 1 yeti boinc    805262 Dez 17 20:05 log.47898896._002491.job.log.1
[2025-12-17 20:05:37] -rw------- 1 yeti boinc       357 Dez 17 20:05 output.list
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc       620 Dez 17 20:05 runtime_log
[2025-12-17 20:05:37] -rw------- 1 yeti boinc   1095680 Dez 17 20:05 result.tar.gz
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc      9572 Dez 17 20:05 runtime_log.err
[2025-12-17 20:05:37] -rw------- 1 yeti boinc       644 Dez 17 20:05 5mqMDmeG2p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgobKDm8RHOrm.diag
[2025-12-17 20:05:37] -rw-r--r-- 1 yeti boinc     22290 Dez 17 20:05 stderr.txt
[2025-12-17 20:05:37] HITS file was successfully produced:
[2025-12-17 20:05:37] -rw------- 1 yeti boinc 174993864 Dez 17 20:03 shared/HITS.pool.root.1
[2025-12-17 20:05:37]  *** Contents of shared directory: ***
[2025-12-17 20:05:37] insgesamt 363660
[2025-12-17 20:05:37] -rw-r--r-- 2 yeti boinc 195671150 Dez 17 18:32 ATLAS.root_0
[2025-12-17 20:05:37] -rw-r--r-- 2 yeti boinc     15847 Dez 17 18:32 start_atlas.sh
[2025-12-17 20:05:37] -rw-r--r-- 2 yeti boinc    592405 Dez 17 18:32 input.tar.gz
[2025-12-17 20:05:37] -rw------- 1 yeti boinc 174993864 Dez 17 20:03 HITS.pool.root.1
[2025-12-17 20:05:37] -rw------- 1 yeti boinc   1095680 Dez 17 20:05 result.tar.gz
20:05:38 (4061907): run_atlas exited; CPU time 20781.691722
20:05:38 (4061907): called boinc_finish(0)

</stderr_txt>
]]>

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