Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
21:39:42 (40580): wrapper (7.7.26015): starting
21:39:42 (40580): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 21:39:42] Arguments: --nthreads 4
[2025-12-17 21:39:42] Threads: 4
[2025-12-17 21:39:42] Checking for CVMFS
[2025-12-17 21:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 21:39:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 21:39:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 21:39:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 21:39:44] 2.13.1.0 1102998 4171 100172 154122 0 188 5241990 10240000 1822 130560 0 7360331 99.996 150257 236 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 21:39:44] CVMFS is ok
[2025-12-17 21:39:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 21:39:44] Checking for apptainer binary...
[2025-12-17 21:39:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 21:39:44] Running /usr/bin/apptainer --version
[2025-12-17 21:39:44] apptainer version 1.4.2
[2025-12-17 21:39:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 21:39:44] julianoldvlneu
[2025-12-17 21:39:44] apptainer works
[2025-12-17 21:39:44] Set ATHENA_PROC_NUMBER=4
[2025-12-17 21:39:44] Set ATHENA_CORE_NUMBER=4
[2025-12-17 21:39:44] Starting ATLAS job with PandaID=6934354504
[2025-12-17 21:39:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 23:17:18]  *** The last 200 lines of the pilot log: ***
[2025-12-17 23:17:18] 2025-12-17 22:16:03,731 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6934354504/log.47898896._002438.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-17 23:17:18] 2025-12-17 22:16:03,774 | INFO     | adding to output.list: log.47898896._002438.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/47/log.47898896._002438.job.log.tg
[2025-12-17 23:17:18] 2025-12-17 22:16:03,776 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 23:17:18] 2025-12-17 22:16:03,776 | INFO     | summary of transferred files:
[2025-12-17 23:17:18] 2025-12-17 22:16:03,776 | INFO     |  -- lfn=log.47898896._002438.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 23:17:18] 2025-12-17 22:16:03,777 | INFO     | stage-out finished correctly
[2025-12-17 23:17:18] 2025-12-17 22:16:04,950 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 23:17:18] 2025-12-17 22:16:05,248 | WARNING  | process 51096 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 23:17:18] 2025-12-17 22:16:05,249 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6934354504/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 23:17:18] 2025-12-17 22:16:05,434 | INFO     | time since job start (5760s) is within the limit (174528.0s)
[2025-12-17 23:17:18] 2025-12-17 22:16:05,490 | INFO     | number of running child processes to parent process 51096: 1
[2025-12-17 23:17:18] 2025-12-17 22:16:05,491 | INFO     | maximum number of monitored processes: 6
[2025-12-17 23:17:18] 2025-12-17 22:16:05,704 | INFO     | job 6934354504 has state=finished
[2025-12-17 23:17:18] 2025-12-17 22:16:05,705 | INFO     | preparing for final server update for job 6934354504 in state='finished'
[2025-12-17 23:17:18] 2025-12-17 22:16:05,705 | INFO     | this job has now completed (state=finished)
[2025-12-17 23:17:18] 2025-12-17 22:16:05,705 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 23:17:18] 2025-12-17 22:16:05,705 | INFO     | log transfer has been attempted: DONE
[2025-12-17 23:17:18] 2025-12-17 22:16:05,706 | INFO     | job 6934354504 has finished - writing final server update
[2025-12-17 23:17:18] 2025-12-17 22:16:05,706 | INFO     | total number of processed events: 400 (read)
[2025-12-17 23:17:18] 2025-12-17 22:16:05,707 | INFO     | executing command: lscpu
[2025-12-17 23:17:18] 2025-12-17 22:16:05,749 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 23:17:18] 2025-12-17 22:16:06,763 | INFO     | PID=44438 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 23:17:18] 2025-12-17 22:16:06,764 | INFO     | .. there are 3 such processes running
[2025-12-17 23:17:18] 2025-12-17 22:16:07,764 | INFO     | time since job start (5762s) is within the limit (174528.0s)
[2025-12-17 23:17:18] 2025-12-17 22:16:07,994 | INFO     | monitor loop #428: job 0:6934354504 is in state 'finished'
[2025-12-17 23:17:18] 2025-12-17 22:16:07,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 23:17:18] 2025-12-17 22:16:09,771 | INFO     | time since job start (5764s) is within the limit (174528.0s)
[2025-12-17 23:17:18] 2025-12-17 22:16:10,498 | INFO     | monitor loop #429: job 0:6934354504 is in state 'finished'
[2025-12-17 23:17:18] 2025-12-17 22:16:10,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 23:17:18] 2025-12-17 22:16:11,776 | INFO     | time since job start (5766s) is within the limit (174528.0s)
[2025-12-17 23:17:18] 2025-12-17 22:16:13,002 | INFO     | monitor loop #430: job 0:6934354504 is in state 'finished'
[2025-12-17 23:17:18] 2025-12-17 22:16:13,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 23:17:18] 2025-12-17 22:16:13,783 | INFO     | time since job start (5768s) is within the limit (174528.0s)
[2025-12-17 23:17:18] 2025-12-17 22:16:15,506 | INFO     | monitor loop #431: job 0:6934354504 is in state 'finished'
[2025-12-17 23:17:18] 2025-12-17 22:16:15,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 23:17:18] 2025-12-17 22:16:15,789 | INFO     | time since job start (5770s) is within the limit (174528.0s)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,686 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 23:17:18] 2025-12-17 22:16:16,687 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3800.0099999999998
[2025-12-17 23:17:18] 2025-12-17 22:16:16,691 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6934354504/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,692 | INFO     | extracted standard info from prmon json
[2025-12-17 23:17:18] 2025-12-17 22:16:16,692 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 23:17:18] 2025-12-17 22:16:16,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 23:17:18] 2025-12-17 22:16:16,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 23:17:18] 2025-12-17 22:16:16,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 23:17:18] 2025-12-17 22:16:16,695 | INFO     | fitting pss+swap vs Time
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | sum of square deviations: 204163828.0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | sum of deviations: -5572868561.0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | mean x: 1766006980.0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | mean y: 2359767.1839080458
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | intersect: 48207396250.671844
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | chi2: 0.02316092885221894
[2025-12-17 23:17:18] 2025-12-17 22:16:16,696 | INFO     | current memory leak: -27.30 B/s (using 87 data points, chi2=0.02)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | ..............................
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . Timing measurements:
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . get job = 0 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . initial setup = 2 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . payload setup = 16 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . stage-in = 0 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . payload execution = 5717 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . stage-out = 0 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | . log creation = 0 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,697 | INFO     | ..............................
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | 
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | job summary report
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | --------------------------------------------------
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | PanDA job id: 6934354504
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | task id: 47898896
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | errors: (none)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | pilot state: finished 
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | transexitcode: 0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | exeerrorcode: 0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | exeerrordiag: 
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | exitcode: 0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | exitmsg: OK
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | cpuconsumptiontime: 21742 s
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | nevents: 400
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | neventsw: 0
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | pid: 51096
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | pgrp: 51096
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | corecount: 4
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | event service: False
[2025-12-17 23:17:18] 2025-12-17 22:16:16,760 | INFO     | sizes: {0: 2283961, 9: 2284223, 11: 2284251, 5738: 2310995, 5739: 2320021, 5740: 2320077, 5752: 2320399}
[2025-12-17 23:17:18] 2025-12-17 22:16:16,761 | INFO     | --------------------------------------------------
[2025-12-17 23:17:18] 2025-12-17 22:16:16,761 | INFO     | 
[2025-12-17 23:17:18] 2025-12-17 22:16:16,761 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 23:17:18] 2025-12-17 22:16:16,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 23:17:18] 2025-12-17 22:16:16,913 | INFO     | job 6934354504 has completed (purged errors)
[2025-12-17 23:17:18] 2025-12-17 22:16:16,913 | INFO     | overall cleanup function is called
[2025-12-17 23:17:18] 2025-12-17 22:16:17,923 | INFO     | --- collectZombieJob: --- 10, [51096]
[2025-12-17 23:17:18] 2025-12-17 22:16:17,923 | INFO     | zombie collector waiting for pid 51096
[2025-12-17 23:17:18] 2025-12-17 22:16:17,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 23:17:18] 2025-12-17 22:16:17,923 | INFO     | collected zombie processes
[2025-12-17 23:17:18] 2025-12-17 22:16:17,923 | INFO     | will attempt to kill all subprocesses of pid=51096
[2025-12-17 23:17:18] 2025-12-17 22:16:18,182 | INFO     | process IDs to be killed: [51096] (in reverse order)
[2025-12-17 23:17:18] 2025-12-17 22:16:18,384 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 23:17:18] 2025-12-17 22:16:18,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 23:17:18] 2025-12-17 22:16:18,392 | INFO     | did not find any defunct processes belonging to 51096
[2025-12-17 23:17:18] 2025-12-17 22:16:18,398 | INFO     | did not find any defunct processes belonging to 51096
[2025-12-17 23:17:18] 2025-12-17 22:16:18,399 | INFO     | ready for new job
[2025-12-17 23:17:18] 2025-12-17 22:16:18,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 23:17:18] 2025-12-17 22:16:18,401 | INFO     | ***************************************
[2025-12-17 23:17:18] 2025-12-17 22:16:18,402 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 23:17:18] 2025-12-17 22:16:18,402 | INFO     | ***************************************
[2025-12-17 23:17:18] 2025-12-17 22:16:18,402 | INFO     | 
[2025-12-17 23:17:18] 2025-12-17 22:16:18,403 | INFO     | pilot is running in a VM
[2025-12-17 23:17:18] 2025-12-17 22:16:18,403 | INFO     | architecture information:
[2025-12-17 23:17:18] 2025-12-17 22:16:18,404 | INFO     | executing command: cat /etc/os-release
[2025-12-17 23:17:18] 2025-12-17 22:16:18,430 | INFO     | cat /etc/os-release:
[2025-12-17 23:17:18] NAME="CentOS Linux"
[2025-12-17 23:17:18] VERSION="7 (Core)"
[2025-12-17 23:17:18] ID="centos"
[2025-12-17 23:17:18] ID_LIKE="rhel fedora"
[2025-12-17 23:17:18] VERSION_ID="7"
[2025-12-17 23:17:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 23:17:18] ANSI_COLOR="0;31"
[2025-12-17 23:17:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 23:17:18] HOME_URL="https://www.centos.org/"
[2025-12-17 23:17:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 23:17:18] 
[2025-12-17 23:17:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 23:17:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 23:17:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 23:17:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 23:17:18] 
[2025-12-17 23:17:18] 2025-12-17 22:16:18,431 | INFO     | ***************************************
[2025-12-17 23:17:18] 2025-12-17 22:16:18,935 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 23:17:18] 2025-12-17 22:16:18,960 | INFO     | sufficient remaining disk space (155283619840 B)
[2025-12-17 23:17:18] 2025-12-17 22:16:18,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 23:17:18] 2025-12-17 22:16:18,961 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 23:17:18] 2025-12-17 22:16:18,961 | INFO     | update_server=False
[2025-12-17 23:17:18] 2025-12-17 22:16:18,961 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 23:17:18] 2025-12-17 22:16:19,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 23:17:18] 2025-12-17 22:16:19,017 | INFO     | aborting loop
[2025-12-17 23:17:18] 2025-12-17 22:16:19,059 | INFO     | all payload control threads have been joined
[2025-12-17 23:17:18] 2025-12-17 22:16:19,209 | INFO     | all job control threads have been joined
[2025-12-17 23:17:18] 2025-12-17 22:16:19,299 | INFO     | all data control threads have been joined
[2025-12-17 23:17:18] 2025-12-17 22:16:19,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 23:17:18] 2025-12-17 22:16:19,967 | INFO     | [job] retrieve thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,023 | INFO     | [job] job monitor thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 23:17:18] 2025-12-17 22:16:20,065 | INFO     | [payload] control thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,157 | INFO     | [payload] validate_post thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,214 | INFO     | [job] control thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,306 | INFO     | [data] control thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,583 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,595 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,631 | INFO     | [data] copytool_in thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,698 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:20,707 | INFO     | [payload] failed_post thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:21,375 | INFO     | [data] copytool_out thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:21,387 | INFO     | [job] validate thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:21,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 23:17:18] 2025-12-17 22:16:22,773 | INFO     | [job] queue monitor thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:24,032 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:29,288 | INFO     | job.realtimelogging is not enabled
[2025-12-17 23:17:18] 2025-12-17 22:16:30,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 23:17:18] 2025-12-17 22:16:49,209 | INFO     | PID=44438 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 23:17:18] 2025-12-17 22:16:49,209 | INFO     | .. there are 3 such processes running
[2025-12-17 23:17:18] 2025-12-17 22:16:49,211 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 23:17:18] 2025-12-17 22:16:49,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 23:17:18] 2025-12-17 22:16:49,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 23:17:18] 2025-12-17 22:17:12,583 | INFO     | [monitor] cgroup control has ended
[2025-12-17 23:17:18] 2025-12-17 22:17:12,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127789852510016)>', '<ExcThread(monitor, started 127789193733888)>']
[2025-12-17 23:17:18] 2025-12-17 22:17:13,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 23:17:18] 2025-12-17 22:17:13,342 | INFO     | [monitor] control thread has ended
[2025-12-17 23:17:18] 2025-12-17 22:17:17,680 | INFO     | all workflow threads have been joined
[2025-12-17 23:17:18] 2025-12-17 22:17:17,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 23:17:18] 2025-12-17 22:17:17,681 | INFO     | traces error code: 0
[2025-12-17 23:17:18] 2025-12-17 22:17:17,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 23:17:18] 2025-12-17 22:17:17,826 [wrapper] ==== pilot stdout END ====
[2025-12-17 23:17:18] 2025-12-17 22:17:17,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 23:17:18] 2025-12-17 22:17:17,843 [wrapper] pilotpid: 44438
[2025-12-17 23:17:18] 2025-12-17 22:17:17,850 [wrapper] Pilot exit status: 0
[2025-12-17 23:17:18] 2025-12-17 22:17:17,881 [wrapper] pandaids: 6934354504
[2025-12-17 23:17:18] 2025-12-17 22:17:17,972 [wrapper] cleanup supervisor_pilot  103722 44439
[2025-12-17 23:17:18] 2025-12-17 22:17:17,980 [wrapper] Test setup, not cleaning
[2025-12-17 23:17:18] 2025-12-17 22:17:17,988 [wrapper] apfmon messages muted
[2025-12-17 23:17:18] 2025-12-17 22:17:17,996 [wrapper] ==== wrapper stdout END ====
[2025-12-17 23:17:18] 2025-12-17 22:17:18,004 [wrapper] ==== wrapper stderr END ====
[2025-12-17 23:17:18]  *** Error codes and diagnostics ***
[2025-12-17 23:17:18]     "exeErrorCode": 0,
[2025-12-17 23:17:18]     "exeErrorDiag": "",
[2025-12-17 23:17:18]     "pilotErrorCode": 0,
[2025-12-17 23:17:18]     "pilotErrorDiag": "",
[2025-12-17 23:17:18]  *** Listing of results directory ***
[2025-12-17 23:17:18] insgesamt 370324
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc    579449 Dez 17 09:37 pilot3.tar.gz
[2025-12-17 23:17:18] -rwx------ 1 yeti boinc     36322 Dez 17 09:40 runpilot2-wrapper.sh
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc      5112 Dez 17 09:42 queuedata.json
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc       100 Dez 17 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 23:17:18] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 21:39 run_atlas
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc       105 Dez 17 21:39 job.xml
[2025-12-17 23:17:18] -rw-r--r-- 2 yeti boinc 196833884 Dez 17 21:39 EVNT.47898894._000094.pool.root.1
[2025-12-17 23:17:18] -rw-r--r-- 2 yeti boinc     15847 Dez 17 21:39 start_atlas.sh
[2025-12-17 23:17:18] drwxrwx--x 2 yeti boinc      4096 Dez 17 21:39 shared
[2025-12-17 23:17:18] -rw-r--r-- 2 yeti boinc    592398 Dez 17 21:39 input.tar.gz
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc      6528 Dez 17 21:39 init_data.xml
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc         0 Dez 17 21:39 boinc_setup_complete
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc         0 Dez 17 21:39 boinc_lockfile
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc      2505 Dez 17 21:39 pandaJob.out
[2025-12-17 23:17:18] -rw------- 1 yeti boinc        52 Dez 17 21:39 setup.sh.local
[2025-12-17 23:17:18] -rw------- 1 yeti boinc    988150 Dez 17 21:40 agis_schedconf.cvmfs.json
[2025-12-17 23:17:18] -rw------- 1 yeti boinc   1516240 Dez 17 21:40 agis_ddmendpoints.agis.ALL.json
[2025-12-17 23:17:18] drwx------ 5 yeti boinc      4096 Dez 17 21:40 pilot3
[2025-12-17 23:17:18] -rw------- 1 yeti boinc 176238333 Dez 17 23:15 HITS.47898896._002438.pool.root.1
[2025-12-17 23:17:18] -rw------- 1 yeti boinc      1015 Dez 17 23:15 memory_monitor_summary.json
[2025-12-17 23:17:18] -rw------- 1 yeti boinc    267432 Dez 17 23:16 log.47898896._002438.job.log.tgz.1
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc       529 Dez 17 23:16 boinc_task_state.xml
[2025-12-17 23:17:18] -rw------- 1 yeti boinc      7738 Dez 17 23:16 heartbeat.json
[2025-12-17 23:17:18] -rw------- 1 yeti boinc        95 Dez 17 23:16 pilot_heartbeat.json
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc        27 Dez 17 23:17 wrapper_checkpoint.txt
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc      8192 Dez 17 23:17 boinc_mmap_file
[2025-12-17 23:17:18] -rw------- 1 yeti boinc      4970 Dez 17 23:17 pilotlog.txt
[2025-12-17 23:17:18] -rw------- 1 yeti boinc    844610 Dez 17 23:17 log.47898896._002438.job.log.1
[2025-12-17 23:17:18] -rw------- 1 yeti boinc       357 Dez 17 23:17 output.list
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc       620 Dez 17 23:17 runtime_log
[2025-12-17 23:17:18] -rw------- 1 yeti boinc   1126400 Dez 17 23:17 result.tar.gz
[2025-12-17 23:17:18] -rw------- 1 yeti boinc       643 Dez 17 23:17 VgKMDmeG2p8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIobKDmvi7zKn.diag
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc      9572 Dez 17 23:17 runtime_log.err
[2025-12-17 23:17:18] -rw-r--r-- 1 yeti boinc     22187 Dez 17 23:17 stderr.txt
[2025-12-17 23:17:18] HITS file was successfully produced:
[2025-12-17 23:17:18] -rw------- 1 yeti boinc 176238333 Dez 17 23:15 shared/HITS.pool.root.1
[2025-12-17 23:17:18]  *** Contents of shared directory: ***
[2025-12-17 23:17:18] insgesamt 366036
[2025-12-17 23:17:18] -rw-r--r-- 2 yeti boinc 196833884 Dez 17 21:39 ATLAS.root_0
[2025-12-17 23:17:18] -rw-r--r-- 2 yeti boinc     15847 Dez 17 21:39 start_atlas.sh
[2025-12-17 23:17:18] -rw-r--r-- 2 yeti boinc    592398 Dez 17 21:39 input.tar.gz
[2025-12-17 23:17:18] -rw------- 1 yeti boinc 176238333 Dez 17 23:15 HITS.pool.root.1
[2025-12-17 23:17:18] -rw------- 1 yeti boinc   1126400 Dez 17 23:17 result.tar.gz
23:17:20 (40580): run_atlas exited; CPU time 21982.686857
23:17:20 (40580): called boinc_finish(0)

</stderr_txt>
]]>

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