Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
23:59:47 (721556): wrapper (7.7.26015): starting
23:59:47 (721556): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 23:59:47] Arguments: --nthreads 4
[2025-12-17 23:59:47] Threads: 4
[2025-12-17 23:59:47] Checking for CVMFS
[2025-12-17 23:59:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 23:59:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 23:59:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 23:59:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 23:59:48] 2.13.1.0 45898 5899 105084 154125 3 188 7204989 10240000 1822 130560 0 11586714 99.996 217555 278 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 23:59:48] CVMFS is ok
[2025-12-17 23:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 23:59:48] Checking for apptainer binary...
[2025-12-17 23:59:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 23:59:48] Running /usr/bin/apptainer --version
[2025-12-17 23:59:48] apptainer version 1.4.4
[2025-12-17 23:59:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 23:59:48] ellievl
[2025-12-17 23:59:48] apptainer works
[2025-12-17 23:59:48] Set ATHENA_PROC_NUMBER=4
[2025-12-17 23:59:48] Set ATHENA_CORE_NUMBER=4
[2025-12-17 23:59:48] Starting ATLAS job with PandaID=6932341662
[2025-12-17 23:59:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-18 01:36:18]  *** The last 200 lines of the pilot log: ***
[2025-12-18 01:36:18] 2025-12-18 00:35:29,272 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932341662/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,274 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932341662/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,274 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-18 01:36:18] 2025-12-18 00:35:29,274 | WARNING  | maxPSS not found in memory monitor output
[2025-12-18 01:36:18] 2025-12-18 00:35:29,274 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2158786 B
[2025-12-18 01:36:18] 2025-12-18 00:35:29,274 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16098 B
[2025-12-18 01:36:18] 2025-12-18 00:35:29,275 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-12-18 01:36:18] 2025-12-18 00:35:29,293 | INFO     | sufficient remaining disk space (56725864448 B)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,294 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,295 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932341662: 2462039 B (within 2768240640 B limit)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,295 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932341662/HITS.47886933._008929.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,295 | INFO     | total size of present files: 0 B (workdir size: 2462039 B)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,295 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932341662/HITS.47886933._008929.pool.root.1 since it does not exist
[2025-12-18 01:36:18] 2025-12-18 00:35:29,507 | INFO     | number of running child processes to parent process 732173: 1
[2025-12-18 01:36:18] 2025-12-18 00:35:29,508 | INFO     | maximum number of monitored processes: 6
[2025-12-18 01:36:18] 2025-12-18 00:35:29,693 | INFO     | time since job start (5723s) is within the limit (174528.0s)
[2025-12-18 01:36:18] 2025-12-18 00:35:29,907 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-18 01:36:18] 2025-12-18 00:35:30,716 | INFO     | job 6932341662 has state=finished
[2025-12-18 01:36:18] 2025-12-18 00:35:30,716 | INFO     | preparing for final server update for job 6932341662 in state='finished'
[2025-12-18 01:36:18] 2025-12-18 00:35:30,717 | INFO     | this job has now completed (state=finished)
[2025-12-18 01:36:18] 2025-12-18 00:35:30,717 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-18 01:36:18] 2025-12-18 00:35:30,717 | INFO     | log transfer has been attempted: DONE
[2025-12-18 01:36:18] 2025-12-18 00:35:30,717 | INFO     | job 6932341662 has finished - writing final server update
[2025-12-18 01:36:18] 2025-12-18 00:35:30,717 | INFO     | total number of processed events: 400 (read)
[2025-12-18 01:36:18] 2025-12-18 00:35:30,718 | INFO     | executing command: lscpu
[2025-12-18 01:36:18] 2025-12-18 00:35:30,752 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-18 01:36:18] 2025-12-18 00:35:31,701 | INFO     | time since job start (5725s) is within the limit (174528.0s)
[2025-12-18 01:36:18] 2025-12-18 00:35:32,013 | INFO     | monitor loop #424: job 0:6932341662 is in state 'finished'
[2025-12-18 01:36:18] 2025-12-18 00:35:32,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 01:36:18] 2025-12-18 00:35:33,707 | INFO     | time since job start (5727s) is within the limit (174528.0s)
[2025-12-18 01:36:18] 2025-12-18 00:35:34,518 | INFO     | monitor loop #425: job 0:6932341662 is in state 'finished'
[2025-12-18 01:36:18] 2025-12-18 00:35:34,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 01:36:18] 2025-12-18 00:35:35,714 | INFO     | time since job start (5729s) is within the limit (174528.0s)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,022 | INFO     | monitor loop #426: job 0:6932341662 is in state 'finished'
[2025-12-18 01:36:18] 2025-12-18 00:35:37,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,720 | INFO     | time since job start (5731s) is within the limit (174528.0s)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,804 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-18 01:36:18] 2025-12-18 00:35:37,806 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3700.0359999999987
[2025-12-18 01:36:18] 2025-12-18 00:35:37,808 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932341662/memory_monitor_summary.json (trf name=prmon)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,809 | INFO     | extracted standard info from prmon json
[2025-12-18 01:36:18] 2025-12-18 00:35:37,809 | INFO     | extracted standard memory fields from prmon json
[2025-12-18 01:36:18] 2025-12-18 00:35:37,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-18 01:36:18] 2025-12-18 00:35:37,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-18 01:36:18] 2025-12-18 00:35:37,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-18 01:36:18] 2025-12-18 00:35:37,811 | INFO     | fitting pss+swap vs Time
[2025-12-18 01:36:18] 2025-12-18 00:35:37,811 | INFO     | sum of square deviations: 204163828.0
[2025-12-18 01:36:18] 2025-12-18 00:35:37,811 | INFO     | sum of deviations: -3896503832.0000005
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | mean x: 1766015373.0
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | mean y: 2331119.8620689656
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | intersect: 33707056073.71339
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | chi2: 0.04040146964851843
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | current memory leak: -19.09 B/s (using 87 data points, chi2=0.04)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | ..............................
[2025-12-18 01:36:18] 2025-12-18 00:35:37,812 | INFO     | . Timing measurements:
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . get job = 0 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . initial setup = 2 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . payload setup = 10 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . stage-in = 0 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . payload execution = 5687 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . stage-out = 0 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | . log creation = 0 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,813 | INFO     | ..............................
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | 
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | job summary report
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | --------------------------------------------------
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | PanDA job id: 6932341662
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | task id: 47886933
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | errors: (none)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | pilot state: finished 
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | transexitcode: 0
[2025-12-18 01:36:18] 2025-12-18 00:35:37,858 | INFO     | exeerrorcode: 0
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | exeerrordiag: 
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | exitcode: 0
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | exitmsg: OK
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | cpuconsumptiontime: 21685 s
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | nevents: 400
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | neventsw: 0
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | pid: 732173
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | pgrp: 732173
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | corecount: 4
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | event service: False
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | sizes: {0: 2283137, 1: 2284007, 9: 2284269, 11: 2284297, 5702: 2320074, 5705: 2320102, 5713: 2320424}
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | --------------------------------------------------
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | 
[2025-12-18 01:36:18] 2025-12-18 00:35:37,859 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-12-18 01:36:18] 2025-12-18 00:35:37,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | job 6932341662 has completed (purged errors)
[2025-12-18 01:36:18] 2025-12-18 00:35:37,888 | INFO     | overall cleanup function is called
[2025-12-18 01:36:18] 2025-12-18 00:35:38,896 | INFO     | --- collectZombieJob: --- 10, [732173]
[2025-12-18 01:36:18] 2025-12-18 00:35:38,896 | INFO     | zombie collector waiting for pid 732173
[2025-12-18 01:36:18] 2025-12-18 00:35:38,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-18 01:36:18] 2025-12-18 00:35:38,897 | INFO     | collected zombie processes
[2025-12-18 01:36:18] 2025-12-18 00:35:38,897 | INFO     | will attempt to kill all subprocesses of pid=732173
[2025-12-18 01:36:18] 2025-12-18 00:35:39,104 | INFO     | process IDs to be killed: [732173] (in reverse order)
[2025-12-18 01:36:18] 2025-12-18 00:35:39,192 | WARNING  | found no corresponding commands to process id(s)
[2025-12-18 01:36:18] 2025-12-18 00:35:39,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-18 01:36:18] 2025-12-18 00:35:39,198 | INFO     | did not find any defunct processes belonging to 732173
[2025-12-18 01:36:18] 2025-12-18 00:35:39,203 | INFO     | did not find any defunct processes belonging to 732173
[2025-12-18 01:36:18] 2025-12-18 00:35:39,204 | INFO     | ready for new job
[2025-12-18 01:36:18] 2025-12-18 00:35:39,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-18 01:36:18] 2025-12-18 00:35:39,206 | INFO     | ***************************************
[2025-12-18 01:36:18] 2025-12-18 00:35:39,206 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-18 01:36:18] 2025-12-18 00:35:39,206 | INFO     | ***************************************
[2025-12-18 01:36:18] 2025-12-18 00:35:39,207 | INFO     | 
[2025-12-18 01:36:18] 2025-12-18 00:35:39,207 | INFO     | pilot is running in a VM
[2025-12-18 01:36:18] 2025-12-18 00:35:39,207 | INFO     | architecture information:
[2025-12-18 01:36:18] 2025-12-18 00:35:39,208 | INFO     | executing command: cat /etc/os-release
[2025-12-18 01:36:18] 2025-12-18 00:35:39,225 | INFO     | cat /etc/os-release:
[2025-12-18 01:36:18] NAME="CentOS Linux"
[2025-12-18 01:36:18] VERSION="7 (Core)"
[2025-12-18 01:36:18] ID="centos"
[2025-12-18 01:36:18] ID_LIKE="rhel fedora"
[2025-12-18 01:36:18] VERSION_ID="7"
[2025-12-18 01:36:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-18 01:36:18] ANSI_COLOR="0;31"
[2025-12-18 01:36:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-18 01:36:18] HOME_URL="https://www.centos.org/"
[2025-12-18 01:36:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-18 01:36:18] 
[2025-12-18 01:36:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-18 01:36:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-18 01:36:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-18 01:36:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-18 01:36:18] 
[2025-12-18 01:36:18] 2025-12-18 00:35:39,225 | INFO     | ***************************************
[2025-12-18 01:36:18] 2025-12-18 00:35:39,729 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-12-18 01:36:18] 2025-12-18 00:35:39,749 | INFO     | sufficient remaining disk space (56729010176 B)
[2025-12-18 01:36:18] 2025-12-18 00:35:39,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-18 01:36:18] 2025-12-18 00:35:39,750 | INFO     | current server update state: UPDATING_FINAL
[2025-12-18 01:36:18] 2025-12-18 00:35:39,750 | INFO     | update_server=False
[2025-12-18 01:36:18] 2025-12-18 00:35:39,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-18 01:36:18] 2025-12-18 00:35:39,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-18 01:36:18] 2025-12-18 00:35:39,971 | INFO     | all payload control threads have been joined
[2025-12-18 01:36:18] 2025-12-18 00:35:40,241 | INFO     | all data control threads have been joined
[2025-12-18 01:36:18] 2025-12-18 00:35:40,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-18 01:36:18] 2025-12-18 00:35:40,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-18 01:36:18] 2025-12-18 00:35:40,531 | INFO     | aborting loop
[2025-12-18 01:36:18] 2025-12-18 00:35:40,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-18 01:36:18] 2025-12-18 00:35:40,756 | INFO     | [job] queue monitor thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:40,757 | INFO     | [job] retrieve thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:40,901 | INFO     | [payload] validate_post thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:40,976 | INFO     | [payload] control thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,093 | INFO     | [payload] failed_post thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,126 | INFO     | all job control threads have been joined
[2025-12-18 01:36:18] 2025-12-18 00:35:41,247 | INFO     | [data] control thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,260 | INFO     | [data] copytool_in thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,536 | INFO     | [job] job monitor thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,567 | INFO     | [payload] execute_payloads thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,813 | INFO     | [job] validate thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,864 | INFO     | [job] create_data_payload thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:41,964 | INFO     | [payload] validate_pre thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:42,132 | INFO     | [job] control thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:42,583 | INFO     | [data] copytool_out thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:44,470 | INFO     | [data] queue_monitor thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:35:50,370 | INFO     | job.realtimelogging is not enabled
[2025-12-18 01:36:18] 2025-12-18 00:35:51,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-18 01:36:18] 2025-12-18 00:36:11,054 | INFO     | PID=725432 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-18 01:36:18] 2025-12-18 00:36:11,055 | INFO     | .. there are 3 such processes running
[2025-12-18 01:36:18] 2025-12-18 00:36:11,055 | INFO     | found 0 job(s) in 20 queues
[2025-12-18 01:36:18] 2025-12-18 00:36:11,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-18 01:36:18] 2025-12-18 00:36:11,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-18 01:36:18] 2025-12-18 00:36:12,850 | INFO     | [monitor] cgroup control has ended
[2025-12-18 01:36:18] 2025-12-18 00:36:13,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135126866057024)>', '<ExcThread(monitor, started 135126197442304)>']
[2025-12-18 01:36:18] 2025-12-18 00:36:14,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-18 01:36:18] 2025-12-18 00:36:14,072 | INFO     | [monitor] control thread has ended
[2025-12-18 01:36:18] 2025-12-18 00:36:18,512 | INFO     | all workflow threads have been joined
[2025-12-18 01:36:18] 2025-12-18 00:36:18,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-18 01:36:18] 2025-12-18 00:36:18,512 | INFO     | traces error code: 0
[2025-12-18 01:36:18] 2025-12-18 00:36:18,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-18 01:36:18] 2025-12-18 00:36:18,613 [wrapper] ==== pilot stdout END ====
[2025-12-18 01:36:18] 2025-12-18 00:36:18,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-18 01:36:18] 2025-12-18 00:36:18,625 [wrapper] pilotpid: 725432
[2025-12-18 01:36:18] 2025-12-18 00:36:18,631 [wrapper] Pilot exit status: 0
[2025-12-18 01:36:18] 2025-12-18 00:36:18,654 [wrapper] pandaids: 6932341662
[2025-12-18 01:36:18] 2025-12-18 00:36:18,727 [wrapper] cleanup supervisor_pilot  800383 725433
[2025-12-18 01:36:18] 2025-12-18 00:36:18,735 [wrapper] Test setup, not cleaning
[2025-12-18 01:36:18] 2025-12-18 00:36:18,741 [wrapper] apfmon messages muted
[2025-12-18 01:36:18] 2025-12-18 00:36:18,748 [wrapper] ==== wrapper stdout END ====
[2025-12-18 01:36:18] 2025-12-18 00:36:18,753 [wrapper] ==== wrapper stderr END ====
[2025-12-18 01:36:18]  *** Error codes and diagnostics ***
[2025-12-18 01:36:18]     "exeErrorCode": 0,
[2025-12-18 01:36:18]     "exeErrorDiag": "",
[2025-12-18 01:36:18]     "pilotErrorCode": 0,
[2025-12-18 01:36:18]     "pilotErrorDiag": "",
[2025-12-18 01:36:18]  *** Listing of results directory ***
[2025-12-18 01:36:18] insgesamt 340344
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc    579449 Dez 17 09:37 pilot3.tar.gz
[2025-12-18 01:36:18] -rwx------ 1 yeti boinc     36322 Dez 17 09:41 runpilot2-wrapper.sh
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc      5112 Dez 17 09:42 queuedata.json
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc       100 Dez 17 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-18 01:36:18] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 23:59 run_atlas
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc       105 Dez 17 23:59 job.xml
[2025-12-18 01:36:18] -rw-r--r-- 2 yeti boinc 195031297 Dez 17 23:59 EVNT.47886929._000363.pool.root.1
[2025-12-18 01:36:18] -rw-r--r-- 2 yeti boinc     15847 Dez 17 23:59 start_atlas.sh
[2025-12-18 01:36:18] drwxrwx--x 2 yeti boinc      4096 Dez 17 23:59 shared
[2025-12-18 01:36:18] -rw-r--r-- 2 yeti boinc    592401 Dez 17 23:59 input.tar.gz
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc      6556 Dez 17 23:59 init_data.xml
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc         0 Dez 17 23:59 boinc_setup_complete
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc         0 Dez 17 23:59 boinc_lockfile
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc      2513 Dez 17 23:59 pandaJob.out
[2025-12-18 01:36:18] -rw------- 1 yeti boinc        52 Dez 17 23:59 setup.sh.local
[2025-12-18 01:36:18] -rw------- 1 yeti boinc    988134 Dez 18 00:00 agis_schedconf.cvmfs.json
[2025-12-18 01:36:18] -rw------- 1 yeti boinc   1516240 Dez 18 00:00 agis_ddmendpoints.agis.ALL.json
[2025-12-18 01:36:18] drwx------ 5 yeti boinc      4096 Dez 18 00:00 pilot3
[2025-12-18 01:36:18] -rw------- 1 yeti boinc 147322041 Dez 18 01:35 HITS.47886933._008929.pool.root.1
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc       529 Dez 18 01:35 boinc_task_state.xml
[2025-12-18 01:36:18] -rw------- 1 yeti boinc      1015 Dez 18 01:35 memory_monitor_summary.json
[2025-12-18 01:36:18] -rw------- 1 yeti boinc    274496 Dez 18 01:35 log.47886933._008929.job.log.tgz.1
[2025-12-18 01:36:18] -rw------- 1 yeti boinc      7718 Dez 18 01:35 heartbeat.json
[2025-12-18 01:36:18] -rw------- 1 yeti boinc        95 Dez 18 01:36 pilot_heartbeat.json
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc      8192 Dez 18 01:36 boinc_mmap_file
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc        27 Dez 18 01:36 wrapper_checkpoint.txt
[2025-12-18 01:36:18] -rw------- 1 yeti boinc      4970 Dez 18 01:36 pilotlog.txt
[2025-12-18 01:36:18] -rw------- 1 yeti boinc    841524 Dez 18 01:36 log.47886933._008929.job.log.1
[2025-12-18 01:36:18] -rw------- 1 yeti boinc       357 Dez 18 01:36 output.list
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc       620 Dez 18 01:36 runtime_log
[2025-12-18 01:36:18] -rw------- 1 yeti boinc   1136640 Dez 18 01:36 result.tar.gz
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc      9537 Dez 18 01:36 runtime_log.err
[2025-12-18 01:36:18] -rw------- 1 yeti boinc       637 Dez 18 01:36 dRFNDmuG2p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3IXKDmH2xssn.diag
[2025-12-18 01:36:18] -rw-r--r-- 1 yeti boinc     22246 Dez 18 01:36 stderr.txt
[2025-12-18 01:36:18] HITS file was successfully produced:
[2025-12-18 01:36:18] -rw------- 1 yeti boinc 147322041 Dez 18 01:35 shared/HITS.pool.root.1
[2025-12-18 01:36:18]  *** Contents of shared directory: ***
[2025-12-18 01:36:18] insgesamt 336052
[2025-12-18 01:36:18] -rw-r--r-- 2 yeti boinc 195031297 Dez 17 23:59 ATLAS.root_0
[2025-12-18 01:36:18] -rw-r--r-- 2 yeti boinc     15847 Dez 17 23:59 start_atlas.sh
[2025-12-18 01:36:18] -rw-r--r-- 2 yeti boinc    592401 Dez 17 23:59 input.tar.gz
[2025-12-18 01:36:18] -rw------- 1 yeti boinc 147322041 Dez 18 01:35 HITS.pool.root.1
[2025-12-18 01:36:18] -rw------- 1 yeti boinc   1136640 Dez 18 01:36 result.tar.gz
01:36:20 (721556): run_atlas exited; CPU time 21928.152528
01:36:20 (721556): called boinc_finish(0)

</stderr_txt>
]]>

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