Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:51 (819828): wrapper (7.7.26015): starting
06:04:51 (819828): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 06:04:51] Arguments: --nthreads 8
[2025-12-17 06:04:51] Threads: 8
[2025-12-17 06:04:51] Checking for CVMFS
[2025-12-17 06:04:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 06:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 06:04:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 06:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 06:04:53] 2.11.3.0 1652368 23632 173028 154112 1 620 27524465 45568001 10932 130560 0 99808936 99.796 59105488 21364 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-17 06:04:53] CVMFS is ok
[2025-12-17 06:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 06:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 06:04:53] Further information can be found at the LHC@home message board.
[2025-12-17 06:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 06:04:53] Checking for apptainer binary...
[2025-12-17 06:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 06:04:53] Running /usr/bin/apptainer --version
[2025-12-17 06:04:53] apptainer version 1.4.1-1.el9
[2025-12-17 06:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 06:04:55] wns0007.triumf.lcg
[2025-12-17 06:04:55] apptainer works
[2025-12-17 06:04:55] Set ATHENA_PROC_NUMBER=8
[2025-12-17 06:04:55] Set ATHENA_CORE_NUMBER=8
[2025-12-17 06:04:55] Starting ATLAS job with PandaID=6932341537
[2025-12-17 06:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:13:58]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | WARNING  | wrong length of table data, x=[1765980549.0, 1765980610.0], y=[2140.0, 466152.0] (must be same and length>=4)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | ..............................
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . Timing measurements:
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . get job = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . initial setup = 8 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . payload setup = 54 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . stage-in = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . payload execution = 113 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . stage-out = 1 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . log creation = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | ..............................
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932341537/pilotlog.txt
[2025-12-17 06:13:58] 2025-12-17 14:13:07,235 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-17 06:13:58] - Log from pilotlog.txt -
[2025-12-17 06:13:58] 2025-12-17 14:13:07,119 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6932341537/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | INFO     | extracted standard info from prmon json
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | WARNING  | wrong length of table data, x=[1765980549.0, 1765980610.0], y=[2140.0, 466152.0] (must be same and length>=4)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | ..............................
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . Timing measurements:
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . get job = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . initial setup = 8 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . payload setup = 54 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . stage-in = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . payload execution = 113 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . stage-out = 1 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . log creation = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | ..............................
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932341537/pilotlog.txt
[2025-12-17 06:13:58] 2025-12-17 14:13:07,235 | WARNING  | 
[2025-12-17 06:13:58] [begin log extracts]
[2025-12-17 06:13:58] - Log from pilotlog.txt -
[2025-12-17 06:13:58] 2025-12-17 14:13:07,119 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6932341537/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | INFO     | extracted standard info from prmon json
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:13:58] 2025-12-17 14:13:07,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | WARNING  | wrong length of table data, x=[1765980549.0, 1765980610.0], y=[2140.0, 466152.0] (must be same and length>=4)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | ..............................
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . Timing measurements:
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . get job = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . initial setup = 8 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,121 | INFO     | . payload setup = 54 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . stage-in = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . payload execution = 113 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . stage-out = 1 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | . log creation = 0 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | ..............................
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 06:13:58] 2025-12-17 14:13:07,122 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6932341537/pilotlog.txt
[2025-12-17 06:13:58] [end log extracts]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,235 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,238 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-17 06:13:58] 2025-12-17 14:13:07,720 | INFO     | 
[2025-12-17 06:13:58] 2025-12-17 14:13:07,721 | INFO     | job summary report
[2025-12-17 06:13:58] 2025-12-17 14:13:07,721 | INFO     | --------------------------------------------------
[2025-12-17 06:13:58] 2025-12-17 14:13:07,721 | INFO     | PanDA job id: 6932341537
[2025-12-17 06:13:58] 2025-12-17 14:13:07,721 | INFO     | task id: 47886933
[2025-12-17 06:13:58] 2025-12-17 14:13:07,721 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-17 06:10:09,114 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-17 06:13:58] 2025-12-17 14:13:07,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | pilot state: failed 
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | transexitcode: 65
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | exeerrorcode: 65
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | exitcode: 65
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | cpuconsumptiontime: 19 s
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | nevents: 0
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | neventsw: 0
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | pid: 830425
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | pgrp: 830425
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | corecount: 8
[2025-12-17 06:13:58] 2025-12-17 14:13:07,722 | INFO     | event service: False
[2025-12-17 06:13:58] 2025-12-17 14:13:07,723 | INFO     | sizes: {0: 2283735, 1: 2283819, 2: 2283990, 3: 2284018, 13: 2284046, 25: 2284102, 35: 2284258, 47: 2284488, 48: 2284604, 58: 2284632, 172: 2308155, 175: 2312475, 1
[2025-12-17 06:13:58] 2025-12-17 14:13:07,723 | INFO     | --------------------------------------------------
[2025-12-17 06:13:58] 2025-12-17 14:13:07,723 | INFO     | 
[2025-12-17 06:13:58] 2025-12-17 14:13:07,723 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-17 06:13:58] 2025-12-17 14:13:07,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | job 6932341537 has completed (purged errors)
[2025-12-17 06:13:58] 2025-12-17 14:13:07,935 | INFO     | overall cleanup function is called
[2025-12-17 06:13:58] 2025-12-17 14:13:08,942 | INFO     | --- collectZombieJob: --- 10, [830425]
[2025-12-17 06:13:58] 2025-12-17 14:13:08,942 | INFO     | zombie collector waiting for pid 830425
[2025-12-17 06:13:58] 2025-12-17 14:13:08,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:13:58] 2025-12-17 14:13:08,942 | INFO     | collected zombie processes
[2025-12-17 06:13:58] 2025-12-17 14:13:08,942 | INFO     | will attempt to kill all subprocesses of pid=830425
[2025-12-17 06:13:58] 2025-12-17 14:13:09,526 | INFO     | process IDs to be killed: [830425] (in reverse order)
[2025-12-17 06:13:58] 2025-12-17 14:13:09,580 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:13:58] 2025-12-17 14:13:09,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:13:58] 2025-12-17 14:13:09,605 | INFO     | did not find any defunct processes belonging to 830425
[2025-12-17 06:13:58] 2025-12-17 14:13:09,651 | INFO     | did not find any defunct processes belonging to 830425
[2025-12-17 06:13:58] 2025-12-17 14:13:09,652 | INFO     | ready for new job
[2025-12-17 06:13:58] 2025-12-17 14:13:09,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:13:58] 2025-12-17 14:13:09,654 | INFO     | ***************************************
[2025-12-17 06:13:58] 2025-12-17 14:13:09,654 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:13:58] 2025-12-17 14:13:09,654 | INFO     | ***************************************
[2025-12-17 06:13:58] 2025-12-17 14:13:09,654 | INFO     | 
[2025-12-17 06:13:58] 2025-12-17 14:13:09,655 | INFO     | architecture information:
[2025-12-17 06:13:58] 2025-12-17 14:13:09,677 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:13:58] 2025-12-17 14:13:09,786 | INFO     | cat /etc/os-release:
[2025-12-17 06:13:58] NAME="CentOS Linux"
[2025-12-17 06:13:58] VERSION="7 (Core)"
[2025-12-17 06:13:58] ID="centos"
[2025-12-17 06:13:58] ID_LIKE="rhel fedora"
[2025-12-17 06:13:58] VERSION_ID="7"
[2025-12-17 06:13:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:13:58] ANSI_COLOR="0;31"
[2025-12-17 06:13:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:13:58] HOME_URL="https://www.centos.org/"
[2025-12-17 06:13:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:13:58] 
[2025-12-17 06:13:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:13:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:13:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:13:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:13:58] 
[2025-12-17 06:13:58] 2025-12-17 14:13:09,786 | INFO     | ***************************************
[2025-12-17 06:13:58] 2025-12-17 14:13:10,290 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-17 06:13:58] 2025-12-17 14:13:10,309 | INFO     | sufficient remaining disk space (1359279554560 B)
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | INFO     | update_server=False
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:13:58] 2025-12-17 14:13:10,310 | INFO     | aborting loop
[2025-12-17 06:13:58] 2025-12-17 14:13:10,615 | INFO     | all job control threads have been joined
[2025-12-17 06:13:58] 2025-12-17 14:13:10,645 | INFO     | all payload control threads have been joined
[2025-12-17 06:13:58] 2025-12-17 14:13:11,316 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:11,320 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:11,329 | INFO     | all data control threads have been joined
[2025-12-17 06:13:58] 2025-12-17 14:13:11,621 | INFO     | [job] control thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:11,651 | INFO     | [payload] control thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:11,656 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:11,783 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:11,822 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,324 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,336 | INFO     | [data] control thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,408 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,730 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:13:58] 2025-12-17 14:13:12,793 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:12,807 | INFO     | [job] validate thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:13,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:13:58] 2025-12-17 14:13:13,753 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:17,296 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:13:58] 2025-12-17 14:13:41,090 | INFO     | PID=823553 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 06:13:58] 2025-12-17 14:13:41,090 | INFO     | .. there are 19 such processes running
[2025-12-17 06:13:58] 2025-12-17 14:13:41,090 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:13:58] 2025-12-17 14:13:41,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:13:58] 2025-12-17 14:13:41,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:13:58] 2025-12-17 14:13:51,249 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:13:58] 2025-12-17 14:13:52,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482130319168)>', '<ExcThread(monitor, started 140481417680640)>']
[2025-12-17 06:13:58] 2025-12-17 14:13:53,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:13:58] 2025-12-17 14:13:53,161 | INFO     | [monitor] control thread has ended
[2025-12-17 06:13:58] 2025-12-17 14:13:57,878 | INFO     | all workflow threads have been joined
[2025-12-17 06:13:58] 2025-12-17 14:13:57,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:13:58] 2025-12-17 14:13:57,878 | INFO     | traces error code: 0
[2025-12-17 06:13:58] 2025-12-17 14:13:57,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:13:58] 2025-12-17 14:13:58,401 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:13:58] 2025-12-17 14:13:58,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:13:58] 2025-12-17 14:13:58,410 [wrapper] pilotpid: 823553
[2025-12-17 06:13:58] 2025-12-17 14:13:58,411 [wrapper] Pilot exit status: 0
[2025-12-17 06:13:58] 2025-12-17 14:13:58,438 [wrapper] pandaids: 6932341537
[2025-12-17 06:13:58] 2025-12-17 14:13:58,476 [wrapper] cleanup supervisor_pilot  823559 823554
[2025-12-17 06:13:58] 2025-12-17 14:13:58,478 [wrapper] Test setup, not cleaning
[2025-12-17 06:13:58] 2025-12-17 14:13:58,480 [wrapper] apfmon messages muted
[2025-12-17 06:13:58] 2025-12-17 14:13:58,482 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:13:58] 2025-12-17 14:13:58,483 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:13:58]  *** Error codes and diagnostics ***
[2025-12-17 06:13:58]     "exeErrorCode": 65,
[2025-12-17 06:13:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 06:13:58]     "pilotErrorCode": 1305,
[2025-12-17 06:13:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 06:13:58]  *** Listing of results directory ***
[2025-12-17 06:13:58] total 190588
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc    579449 Dec 17 00:37 pilot3.tar.gz
[2025-12-17 06:13:58] -rwx------. 1 boinc boinc     36322 Dec 17 00:38 runpilot2-wrapper.sh
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc      5112 Dec 17 00:38 queuedata.json
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc       100 Dec 17 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:13:58] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 06:04 run_atlas
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc       105 Dec 17 06:04 job.xml
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc      6445 Dec 17 06:04 init_data.xml
[2025-12-17 06:13:58] -rw-r--r--. 2 boinc boinc 190983101 Dec 17 06:04 EVNT.47886929._000358.pool.root.1
[2025-12-17 06:13:58] -rw-r--r--. 2 boinc boinc     15847 Dec 17 06:04 start_atlas.sh
[2025-12-17 06:13:58] drwxrwx--x. 2 boinc boinc      4096 Dec 17 06:04 shared
[2025-12-17 06:13:58] -rw-r--r--. 2 boinc boinc    592401 Dec 17 06:04 input.tar.gz
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc         0 Dec 17 06:04 boinc_lockfile
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc      2513 Dec 17 06:04 pandaJob.out
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc    987423 Dec 17 06:05 agis_schedconf.cvmfs.json
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc   1516240 Dec 17 06:05 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:13:58] drwx------. 5 boinc boinc      4096 Dec 17 06:05 pilot3
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc       525 Dec 17 06:10 boinc_task_state.xml
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc       983 Dec 17 06:10 memory_monitor_summary.json
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc     23284 Dec 17 06:10 log.47886933._008804.job.log.tgz.1
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc        95 Dec 17 06:12 pilot_heartbeat.json
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc      8408 Dec 17 06:13 heartbeat.json
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc        23 Dec 17 06:13 wrapper_checkpoint.txt
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc      8192 Dec 17 06:13 boinc_mmap_file
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc      4822 Dec 17 06:13 pilotlog.txt
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc    109830 Dec 17 06:13 log.47886933._008804.job.log.1
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc       188 Dec 17 06:13 output.list
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc       620 Dec 17 06:13 runtime_log
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc    153600 Dec 17 06:13 result.tar.gz
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc      8634 Dec 17 06:13 runtime_log.err
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc       644 Dec 17 06:13 OxdMDm1D2p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnBXKDmr1B1Xo.diag
[2025-12-17 06:13:58] -rw-r--r--. 1 boinc boinc     21842 Dec 17 06:13 stderr.txt
[2025-12-17 06:13:58] No HITS result produced
[2025-12-17 06:13:58]  *** Contents of shared directory: ***
[2025-12-17 06:13:58] total 187260
[2025-12-17 06:13:58] -rw-r--r--. 2 boinc boinc 190983101 Dec 17 06:04 ATLAS.root_0
[2025-12-17 06:13:58] -rw-r--r--. 2 boinc boinc     15847 Dec 17 06:04 start_atlas.sh
[2025-12-17 06:13:58] -rw-r--r--. 2 boinc boinc    592401 Dec 17 06:04 input.tar.gz
[2025-12-17 06:13:58] -rw-------. 1 boinc boinc    153600 Dec 17 06:13 result.tar.gz
06:14:00 (819828): run_atlas exited; CPU time 36.081349
06:14:00 (819828): called boinc_finish(0)

</stderr_txt>
]]>

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