Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:59:27 (810440): wrapper (7.7.26015): starting
14:59:27 (810440): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 14:59:27] Arguments: --nthreads 12
[2025-12-17 14:59:27] Threads: 12
[2025-12-17 14:59:27] Checking for CVMFS
[2025-12-17 14:59:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 14:59:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 14:59:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 14:59:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 14:59:28] 2.13.3.0 583647 100 54628 154112 3 188 2981134 4096001 929 130560 0 635314 99.997 4225 409 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-17 14:59:28] CVMFS is ok
[2025-12-17 14:59:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 14:59:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 14:59:28] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-17 14:59:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-17 14:59:28] Further information can be found at the LHC@home message board.
[2025-12-17 14:59:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 14:59:28] Checking for apptainer binary...
[2025-12-17 14:59:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 14:59:28] Running /usr/bin/apptainer --version
[2025-12-17 14:59:28] apptainer version 1.4.5-2.el10_1
[2025-12-17 14:59:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 14:59:28] OSIRIS
[2025-12-17 14:59:28] apptainer works
[2025-12-17 14:59:28] Set ATHENA_PROC_NUMBER=12
[2025-12-17 14:59:28] Set ATHENA_CORE_NUMBER=12
[2025-12-17 14:59:28] Starting ATLAS job with PandaID=6932341509
[2025-12-17 14:59:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:21:44]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:21:44]  status_code=0
[2025-12-17 15:21:44]  storage_token=
[2025-12-17 15:21:44]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6932341509/log.47886933._008776.job.log.tgz.1
[2025-12-17 15:21:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/4a/log.47886933._008776.job.log.tgz.1
[2025-12-17 15:21:44]  workdir=None
[2025-12-17 15:21:44] ]
[2025-12-17 15:21:44] 2025-12-17 14:20:57,006 | INFO     | transferring file log.47886933._008776.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6932341509/log.47886933._008776.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-12-17 15:21:44] 2025-12-17 14:20:57,006 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6932341509/log.47886933._008776.job.log.tgz.1 /var/lib/boinc/slots/3/log.47886933._008776.job
[2025-12-17 15:21:44] 2025-12-17 14:20:57,015 | INFO     | adding to output.list: log.47886933._008776.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/4a/log.47886933._008776.job.log.tg
[2025-12-17 15:21:44] 2025-12-17 14:20:57,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 15:21:44] 2025-12-17 14:20:57,016 | INFO     | summary of transferred files:
[2025-12-17 15:21:44] 2025-12-17 14:20:57,016 | INFO     |  -- lfn=log.47886933._008776.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 15:21:44] 2025-12-17 14:20:57,016 | INFO     | stage-out finished correctly
[2025-12-17 15:21:44] 2025-12-17 14:20:57,852 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 15:21:44] 2025-12-17 14:20:58,157 | INFO     | monitor loop #101: job 0:6932341509 is in state 'finished'
[2025-12-17 15:21:44] 2025-12-17 14:20:58,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 15:21:44] 2025-12-17 14:20:58,339 | INFO     | time since job start (1282s) is within the limit (174528.0s)
[2025-12-17 15:21:44] 2025-12-17 14:21:00,341 | INFO     | time since job start (1284s) is within the limit (174528.0s)
[2025-12-17 15:21:44] 2025-12-17 14:21:00,660 | INFO     | monitor loop #102: job 0:6932341509 is in state 'finished'
[2025-12-17 15:21:44] 2025-12-17 14:21:00,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 15:21:44] 2025-12-17 14:21:00,840 | INFO     | job 6932341509 has state=finished
[2025-12-17 15:21:44] 2025-12-17 14:21:00,840 | INFO     | preparing for final server update for job 6932341509 in state='finished'
[2025-12-17 15:21:44] 2025-12-17 14:21:01,411 | INFO     | PID=814649 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 15:21:44] 2025-12-17 14:21:01,411 | INFO     | .. there are 4 such processes running
[2025-12-17 15:21:44] 2025-12-17 14:21:01,873 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-17 15:21:44] 2025-12-17 14:21:01,873 | INFO     | this job has now completed (state=finished)
[2025-12-17 15:21:44] 2025-12-17 14:21:01,874 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 15:21:44] 2025-12-17 14:21:01,874 | INFO     | log transfer has been attempted: DONE
[2025-12-17 15:21:44] 2025-12-17 14:21:01,874 | INFO     | job 6932341509 has finished - writing final server update
[2025-12-17 15:21:44] 2025-12-17 14:21:01,874 | INFO     | total number of processed events: 400 (read)
[2025-12-17 15:21:44] 2025-12-17 14:21:01,874 | INFO     | executing command: lscpu
[2025-12-17 15:21:44] 2025-12-17 14:21:01,891 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 15:21:44] 2025-12-17 14:21:02,411 | INFO     | time since job start (1286s) is within the limit (174528.0s)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,163 | INFO     | monitor loop #103: job 0:6932341509 is in state 'finished'
[2025-12-17 15:21:44] 2025-12-17 14:21:03,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,494 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 15:21:44] 2025-12-17 14:21:03,496 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 4648.053854166667
[2025-12-17 15:21:44] 2025-12-17 14:21:03,499 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6932341509/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,499 | INFO     | extracted standard info from prmon json
[2025-12-17 15:21:44] 2025-12-17 14:21:03,499 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 15:21:44] 2025-12-17 14:21:03,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 15:21:44] 2025-12-17 14:21:03,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | fitting pss+swap vs Time
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | sum of square deviations: 846527.5
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | sum of deviations: -2413373.5
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | mean x: 1765980692.5
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | mean y: 2815470.5
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | intersect: 5037467037.981444
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | chi2: 0.0019016722679716825
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | current memory leak: -2.85 B/s (using 14 data points, chi2=0.00)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,500 | INFO     | could have reported an average CPU frequency of 3912 MHz (4 samples)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | ..............................
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . Timing measurements:
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . get job = 0 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . initial setup = 0 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . payload setup = 1 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . stage-in = 0 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . payload execution = 1263 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . stage-out = 0 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | . log creation = 0 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,501 | INFO     | ..............................
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | 
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | job summary report
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | --------------------------------------------------
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | PanDA job id: 6932341509
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | task id: 47886933
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | errors: (none)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | pilot state: finished 
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | transexitcode: 0
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | exeerrorcode: 0
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | exeerrordiag: 
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | exitcode: 0
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | exitmsg: OK
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | cpuconsumptiontime: 13246 s
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | nevents: 400
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | neventsw: 0
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | pid: 821397
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | pgrp: 821397
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | corecount: 12
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | event service: False
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | sizes: {0: 2283965, 1: 2284227, 11: 2284255, 1268: 2308890, 1269: 2317888, 1270: 2317944, 1275: 2318266}
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | --------------------------------------------------
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | 
[2025-12-17 15:21:44] 2025-12-17 14:21:03,538 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 15:21:44] 2025-12-17 14:21:03,548 | INFO     | job 6932341509 has completed (purged errors)
[2025-12-17 15:21:44] 2025-12-17 14:21:03,548 | INFO     | overall cleanup function is called
[2025-12-17 15:21:44] 2025-12-17 14:21:04,554 | INFO     | --- collectZombieJob: --- 10, [821397]
[2025-12-17 15:21:44] 2025-12-17 14:21:04,554 | INFO     | zombie collector waiting for pid 821397
[2025-12-17 15:21:44] 2025-12-17 14:21:04,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 15:21:44] 2025-12-17 14:21:04,554 | INFO     | collected zombie processes
[2025-12-17 15:21:44] 2025-12-17 14:21:04,554 | INFO     | will attempt to kill all subprocesses of pid=821397
[2025-12-17 15:21:44] 2025-12-17 14:21:04,609 | INFO     | process IDs to be killed: [821397] (in reverse order)
[2025-12-17 15:21:44] 2025-12-17 14:21:04,640 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 15:21:44] 2025-12-17 14:21:04,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 15:21:44] 2025-12-17 14:21:04,643 | INFO     | did not find any defunct processes belonging to 821397
[2025-12-17 15:21:44] 2025-12-17 14:21:04,646 | INFO     | did not find any defunct processes belonging to 821397
[2025-12-17 15:21:44] 2025-12-17 14:21:04,646 | INFO     | ready for new job
[2025-12-17 15:21:44] 2025-12-17 14:21:04,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 15:21:44] 2025-12-17 14:21:04,647 | INFO     | ***************************************
[2025-12-17 15:21:44] 2025-12-17 14:21:04,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 15:21:44] 2025-12-17 14:21:04,647 | INFO     | ***************************************
[2025-12-17 15:21:44] 2025-12-17 14:21:04,647 | INFO     | 
[2025-12-17 15:21:44] 2025-12-17 14:21:04,647 | INFO     | architecture information:
[2025-12-17 15:21:44] 2025-12-17 14:21:04,648 | INFO     | executing command: cat /etc/os-release
[2025-12-17 15:21:44] 2025-12-17 14:21:04,654 | INFO     | cat /etc/os-release:
[2025-12-17 15:21:44] NAME="CentOS Linux"
[2025-12-17 15:21:44] VERSION="7 (Core)"
[2025-12-17 15:21:44] ID="centos"
[2025-12-17 15:21:44] ID_LIKE="rhel fedora"
[2025-12-17 15:21:44] VERSION_ID="7"
[2025-12-17 15:21:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 15:21:44] ANSI_COLOR="0;31"
[2025-12-17 15:21:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 15:21:44] HOME_URL="https://www.centos.org/"
[2025-12-17 15:21:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 15:21:44] 
[2025-12-17 15:21:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 15:21:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 15:21:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 15:21:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 15:21:44] 
[2025-12-17 15:21:44] 2025-12-17 14:21:04,655 | INFO     | ***************************************
[2025-12-17 15:21:44] 2025-12-17 14:21:05,157 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | INFO     | sufficient remaining disk space (1265675272192 B)
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | INFO     | update_server=False
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 15:21:44] 2025-12-17 14:21:05,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:21:44] 2025-12-17 14:21:05,264 | INFO     | all data control threads have been joined
[2025-12-17 15:21:44] 2025-12-17 14:21:05,304 | INFO     | all payload control threads have been joined
[2025-12-17 15:21:44] 2025-12-17 14:21:05,666 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 15:21:44] 2025-12-17 14:21:05,667 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 15:21:44] 2025-12-17 14:21:05,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:21:44] 2025-12-17 14:21:05,667 | INFO     | will abort loop
[2025-12-17 15:21:44] 2025-12-17 14:21:06,170 | INFO     | [job] retrieve thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,171 | INFO     | [job] queue monitor thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,269 | INFO     | [data] control thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,309 | INFO     | [payload] control thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,355 | INFO     | [payload] failed_post thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,510 | INFO     | [data] copytool_in thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,672 | INFO     | [job] job monitor thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:06,768 | INFO     | all job control threads have been joined
[2025-12-17 15:21:44] 2025-12-17 14:21:06,902 | INFO     | [payload] validate_post thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:07,006 | INFO     | [job] validate thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:07,059 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:07,068 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:07,171 | INFO     | [data] copytool_out thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:07,443 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:07,774 | INFO     | [job] control thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:08,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 15:21:44] 2025-12-17 14:21:12,401 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:15,262 | INFO     | job.realtimelogging is not enabled
[2025-12-17 15:21:44] 2025-12-17 14:21:16,266 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:21:44] 2025-12-17 14:21:35,550 | INFO     | PID=814649 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 15:21:44] 2025-12-17 14:21:35,550 | INFO     | .. there are 4 such processes running
[2025-12-17 15:21:44] 2025-12-17 14:21:35,550 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:21:44] 2025-12-17 14:21:35,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:21:44] 2025-12-17 14:21:35,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:21:44] 2025-12-17 14:21:38,654 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:21:44] 2025-12-17 14:21:39,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250669233984)>', '<ExcThread(monitor, started 140249707558656)>']
[2025-12-17 15:21:44] 2025-12-17 14:21:39,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:21:44] 2025-12-17 14:21:39,570 | INFO     | [monitor] control thread has ended
[2025-12-17 15:21:44] 2025-12-17 14:21:44,045 | INFO     | all workflow threads have been joined
[2025-12-17 15:21:44] 2025-12-17 14:21:44,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:21:44] 2025-12-17 14:21:44,046 | INFO     | traces error code: 0
[2025-12-17 15:21:44] 2025-12-17 14:21:44,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:21:44] 2025-12-17 14:21:44,102 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:21:44] 2025-12-17 14:21:44,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:21:44] 2025-12-17 14:21:44,105 [wrapper] pilotpid: 814649
[2025-12-17 15:21:44] 2025-12-17 14:21:44,106 [wrapper] Pilot exit status: 0
[2025-12-17 15:21:44] 2025-12-17 14:21:44,110 [wrapper] pandaids: 6932341509
[2025-12-17 15:21:44] 2025-12-17 14:21:44,127 [wrapper] cleanup supervisor_pilot  865410 814650
[2025-12-17 15:21:44] 2025-12-17 14:21:44,128 [wrapper] Test setup, not cleaning
[2025-12-17 15:21:44] 2025-12-17 14:21:44,129 [wrapper] apfmon messages muted
[2025-12-17 15:21:44] 2025-12-17 14:21:44,130 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:21:44] 2025-12-17 14:21:44,132 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:21:44]  *** Error codes and diagnostics ***
[2025-12-17 15:21:44]     "exeErrorCode": 0,
[2025-12-17 15:21:44]     "exeErrorDiag": "",
[2025-12-17 15:21:44]     "pilotErrorCode": 0,
[2025-12-17 15:21:44]     "pilotErrorDiag": "",
[2025-12-17 15:21:44]  *** Listing of results directory ***
[2025-12-17 15:21:44] total 328020
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc    579449 Dec 17 09:37 pilot3.tar.gz
[2025-12-17 15:21:44] -rwx------ 1 boinc boinc     36322 Dec 17 09:38 runpilot2-wrapper.sh
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc      5112 Dec 17 09:38 queuedata.json
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc       100 Dec 17 14:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:21:44] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 14:59 run_atlas
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc       105 Dec 17 14:59 job.xml
[2025-12-17 15:21:44] -rw-r--r-- 2 boinc boinc     15847 Dec 17 14:59 start_atlas.sh
[2025-12-17 15:21:44] drwxrwx--x 2 boinc boinc        68 Dec 17 14:59 shared
[2025-12-17 15:21:44] -rw-r--r-- 2 boinc boinc    592397 Dec 17 14:59 input.tar.gz
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc      9189 Dec 17 14:59 init_data.xml
[2025-12-17 15:21:44] -rw-r--r-- 2 boinc boinc 192044788 Dec 17 14:59 EVNT.47886929._000357.pool.root.1
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc         0 Dec 17 14:59 boinc_setup_complete
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc         0 Dec 17 14:59 boinc_lockfile
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc      2513 Dec 17 14:59 pandaJob.out
[2025-12-17 15:21:44] -rw------- 1 boinc boinc    987423 Dec 17 14:59 agis_schedconf.cvmfs.json
[2025-12-17 15:21:44] -rw------- 1 boinc boinc   1516240 Dec 17 14:59 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:21:44] drwx------ 5 boinc boinc      4096 Dec 17 14:59 pilot3
[2025-12-17 15:21:44] -rw------- 1 boinc boinc 138835125 Dec 17 15:20 HITS.47886933._008776.pool.root.1
[2025-12-17 15:21:44] -rw------- 1 boinc boinc        95 Dec 17 15:20 pilot_heartbeat.json
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc       529 Dec 17 15:20 boinc_task_state.xml
[2025-12-17 15:21:44] -rw------- 1 boinc boinc      1026 Dec 17 15:20 memory_monitor_summary.json
[2025-12-17 15:21:44] -rw------- 1 boinc boinc    324617 Dec 17 15:20 log.47886933._008776.job.log.tgz.1
[2025-12-17 15:21:44] -rw------- 1 boinc boinc      7779 Dec 17 15:21 heartbeat.json
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc        27 Dec 17 15:21 wrapper_checkpoint.txt
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc      8192 Dec 17 15:21 boinc_mmap_file
[2025-12-17 15:21:44] -rw------- 1 boinc boinc      5082 Dec 17 15:21 pilotlog.txt
[2025-12-17 15:21:44] -rw------- 1 boinc boinc    231706 Dec 17 15:21 log.47886933._008776.job.log.1
[2025-12-17 15:21:44] -rw------- 1 boinc boinc       357 Dec 17 15:21 output.list
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc       620 Dec 17 15:21 runtime_log
[2025-12-17 15:21:44] -rw------- 1 boinc boinc    573440 Dec 17 15:21 result.tar.gz
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc      8765 Dec 17 15:21 runtime_log.err
[2025-12-17 15:21:44] -rw------- 1 boinc boinc       637 Dec 17 15:21 QwtLDm1D2p8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZBXKDm8Np8Ym.diag
[2025-12-17 15:21:44] -rw-r--r-- 1 boinc boinc     22337 Dec 17 15:21 stderr.txt
[2025-12-17 15:21:44] HITS file was successfully produced:
[2025-12-17 15:21:44] -rw------- 1 boinc boinc 138835125 Dec 17 15:20 shared/HITS.pool.root.1
[2025-12-17 15:21:44]  *** Contents of shared directory: ***
[2025-12-17 15:21:44] total 324284
[2025-12-17 15:21:44] -rw-r--r-- 2 boinc boinc     15847 Dec 17 14:59 start_atlas.sh
[2025-12-17 15:21:44] -rw-r--r-- 2 boinc boinc    592397 Dec 17 14:59 input.tar.gz
[2025-12-17 15:21:44] -rw-r--r-- 2 boinc boinc 192044788 Dec 17 14:59 ATLAS.root_0
[2025-12-17 15:21:44] -rw------- 1 boinc boinc 138835125 Dec 17 15:20 HITS.pool.root.1
[2025-12-17 15:21:44] -rw------- 1 boinc boinc    573440 Dec 17 15:21 result.tar.gz
15:21:45 (810440): run_atlas exited; CPU time 13252.804369
15:21:45 (810440): called boinc_finish(0)

</stderr_txt>
]]>

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