Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
18:17:53 (712947): wrapper (7.7.26015): starting
18:17:53 (712947): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 18:17:53] Arguments: --nthreads 4
[2025-12-17 18:17:53] Threads: 4
[2025-12-17 18:17:53] Checking for CVMFS
[2025-12-17 18:17:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 18:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 18:17:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 18:17:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 18:17:54] 2.12.7.0 131565 5299 56344 154112 1 188 9784965 10240001 1336 130560 0 13158791 99.961 512099 462 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 18:17:54] CVMFS is ok
[2025-12-17 18:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 18:17:54] Checking for apptainer binary...
[2025-12-17 18:17:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 18:17:54] Running /usr/bin/apptainer --version
[2025-12-17 18:17:54] apptainer version 1.3.4
[2025-12-17 18:17:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 18:17:55] diegovlneu
[2025-12-17 18:17:55] apptainer works
[2025-12-17 18:17:55] Set ATHENA_PROC_NUMBER=4
[2025-12-17 18:17:55] Set ATHENA_CORE_NUMBER=4
[2025-12-17 18:17:55] Starting ATLAS job with PandaID=6931734957
[2025-12-17 18:17:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 19:27:22]  *** The last 200 lines of the pilot log: ***
[2025-12-17 19:27:22]  is_tar=False
[2025-12-17 19:27:22]  lfn=log.47886831._016402.job.log.tgz.1
[2025-12-17 19:27:22]  mtime=0
[2025-12-17 19:27:22]  protocol_id=None
[2025-12-17 19:27:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-17 19:27:22]  replicas=None
[2025-12-17 19:27:22]  scope=mc23_13p6TeV
[2025-12-17 19:27:22]  status=None
[2025-12-17 19:27:22]  status_code=0
[2025-12-17 19:27:22]  storage_token=
[2025-12-17 19:27:22]  surl=/var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6931734957/log.47886831._016402.job.log.tgz.1
[2025-12-17 19:27:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/00/log.47886831._016402.job.log.tgz.1
[2025-12-17 19:27:22]  workdir=None
[2025-12-17 19:27:22] ]
[2025-12-17 19:27:22] 2025-12-17 18:26:23,601 | INFO     | transferring file log.47886831._016402.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6931734957/log.47886831._016402.job.log.tgz.1 to /var/li
[2025-12-17 19:27:22] 2025-12-17 18:26:23,601 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6931734957/log.47886831._016402.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-17 19:27:22] 2025-12-17 18:26:23,625 | INFO     | adding to output.list: log.47886831._016402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/00/log.47886831._016402.job.log.tg
[2025-12-17 19:27:22] 2025-12-17 18:26:23,626 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 19:27:22] 2025-12-17 18:26:23,626 | INFO     | summary of transferred files:
[2025-12-17 19:27:22] 2025-12-17 18:26:23,627 | INFO     |  -- lfn=log.47886831._016402.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 19:27:22] 2025-12-17 18:26:23,627 | INFO     | stage-out finished correctly
[2025-12-17 19:27:22] 2025-12-17 18:26:23,658 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 19:27:22] 2025-12-17 18:26:23,788 | INFO     | job 6931734957 has state=finished
[2025-12-17 19:27:22] 2025-12-17 18:26:23,788 | INFO     | preparing for final server update for job 6931734957 in state='finished'
[2025-12-17 19:27:22] 2025-12-17 18:26:23,788 | INFO     | this job has now completed (state=finished)
[2025-12-17 19:27:22] 2025-12-17 18:26:23,788 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 19:27:22] 2025-12-17 18:26:23,788 | INFO     | log transfer has been attempted: DONE
[2025-12-17 19:27:22] 2025-12-17 18:26:23,789 | INFO     | job 6931734957 has finished - writing final server update
[2025-12-17 19:27:22] 2025-12-17 18:26:23,789 | INFO     | total number of processed events: 400 (read)
[2025-12-17 19:27:22] 2025-12-17 18:26:23,789 | INFO     | executing command: lscpu
[2025-12-17 19:27:22] 2025-12-17 18:26:23,816 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 19:27:22] 2025-12-17 18:26:25,324 | INFO     | monitor loop #309: job 0:6931734957 is in state 'finished'
[2025-12-17 19:27:22] 2025-12-17 18:26:25,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:27:22] 2025-12-17 18:26:25,480 | INFO     | time since job start (4095s) is within the limit (174528.0s)
[2025-12-17 19:27:22] 2025-12-17 18:26:27,486 | INFO     | time since job start (4097s) is within the limit (174528.0s)
[2025-12-17 19:27:22] 2025-12-17 18:26:27,827 | INFO     | monitor loop #310: job 0:6931734957 is in state 'finished'
[2025-12-17 19:27:22] 2025-12-17 18:26:27,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,081 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 19:27:22] 2025-12-17 18:26:29,082 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 4699.926999999997
[2025-12-17 19:27:22] 2025-12-17 18:26:29,084 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6931734957/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,084 | INFO     | extracted standard info from prmon json
[2025-12-17 19:27:22] 2025-12-17 18:26:29,084 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 19:27:22] 2025-12-17 18:26:29,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 19:27:22] 2025-12-17 18:26:29,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 19:27:22] 2025-12-17 18:26:29,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 19:27:22] 2025-12-17 18:26:29,085 | INFO     | fitting pss+swap vs Time
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | sum of square deviations: 66959395.0
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | sum of deviations: -460577358.5
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | mean x: 1765994029.5
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | mean y: 2325812.6166666667
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | intersect: 12149640841.880014
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | chi2: 0.0022548570748235973
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | current memory leak: -6.88 B/s (using 60 data points, chi2=0.00)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | could have reported an average CPU frequency of 4699 MHz (6 samples)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | ..............................
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | . Timing measurements:
[2025-12-17 19:27:22] 2025-12-17 18:26:29,086 | INFO     | . get job = 0 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | . initial setup = 1 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | . payload setup = 9 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | . stage-in = 0 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | . payload execution = 4062 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | . stage-out = 0 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | . log creation = 0 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,087 | INFO     | ..............................
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | 
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | job summary report
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | --------------------------------------------------
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | PanDA job id: 6931734957
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | task id: 47886831
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | errors: (none)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | pilot state: finished 
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | transexitcode: 0
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | exeerrorcode: 0
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | exeerrordiag: 
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | exitcode: 0
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | exitmsg: OK
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | cpuconsumptiontime: 15191 s
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | nevents: 400
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | neventsw: 0
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | pid: 723382
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | pgrp: 723382
[2025-12-17 19:27:22] 2025-12-17 18:26:29,123 | INFO     | corecount: 4
[2025-12-17 19:27:22] 2025-12-17 18:26:29,124 | INFO     | event service: False
[2025-12-17 19:27:22] 2025-12-17 18:26:29,124 | INFO     | sizes: {0: 2284007, 7: 2284269, 11: 2284297, 4075: 2310189, 4076: 2319271, 4081: 2319409}
[2025-12-17 19:27:22] 2025-12-17 18:26:29,124 | INFO     | --------------------------------------------------
[2025-12-17 19:27:22] 2025-12-17 18:26:29,124 | INFO     | 
[2025-12-17 19:27:22] 2025-12-17 18:26:29,124 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 19:27:22] 2025-12-17 18:26:29,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 19:27:22] 2025-12-17 18:26:29,148 | INFO     | job 6931734957 has completed (purged errors)
[2025-12-17 19:27:22] 2025-12-17 18:26:29,149 | INFO     | overall cleanup function is called
[2025-12-17 19:27:22] 2025-12-17 18:26:30,158 | INFO     | --- collectZombieJob: --- 10, [723382]
[2025-12-17 19:27:22] 2025-12-17 18:26:30,158 | INFO     | zombie collector waiting for pid 723382
[2025-12-17 19:27:22] 2025-12-17 18:26:30,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 19:27:22] 2025-12-17 18:26:30,158 | INFO     | collected zombie processes
[2025-12-17 19:27:22] 2025-12-17 18:26:30,158 | INFO     | will attempt to kill all subprocesses of pid=723382
[2025-12-17 19:27:22] 2025-12-17 18:26:30,292 | INFO     | process IDs to be killed: [723382] (in reverse order)
[2025-12-17 19:27:22] 2025-12-17 18:26:30,365 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 19:27:22] 2025-12-17 18:26:30,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 19:27:22] 2025-12-17 18:26:30,370 | INFO     | did not find any defunct processes belonging to 723382
[2025-12-17 19:27:22] 2025-12-17 18:26:30,373 | INFO     | did not find any defunct processes belonging to 723382
[2025-12-17 19:27:22] 2025-12-17 18:26:30,373 | INFO     | ready for new job
[2025-12-17 19:27:22] 2025-12-17 18:26:30,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 19:27:22] 2025-12-17 18:26:30,376 | INFO     | ***************************************
[2025-12-17 19:27:22] 2025-12-17 18:26:30,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 19:27:22] 2025-12-17 18:26:30,376 | INFO     | ***************************************
[2025-12-17 19:27:22] 2025-12-17 18:26:30,376 | INFO     | 
[2025-12-17 19:27:22] 2025-12-17 18:26:30,377 | INFO     | pilot is running in a VM
[2025-12-17 19:27:22] 2025-12-17 18:26:30,377 | INFO     | architecture information:
[2025-12-17 19:27:22] 2025-12-17 18:26:30,377 | INFO     | executing command: cat /etc/os-release
[2025-12-17 19:27:22] 2025-12-17 18:26:30,393 | INFO     | cat /etc/os-release:
[2025-12-17 19:27:22] NAME="CentOS Linux"
[2025-12-17 19:27:22] VERSION="7 (Core)"
[2025-12-17 19:27:22] ID="centos"
[2025-12-17 19:27:22] ID_LIKE="rhel fedora"
[2025-12-17 19:27:22] VERSION_ID="7"
[2025-12-17 19:27:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 19:27:22] ANSI_COLOR="0;31"
[2025-12-17 19:27:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 19:27:22] HOME_URL="https://www.centos.org/"
[2025-12-17 19:27:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 19:27:22] 
[2025-12-17 19:27:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 19:27:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 19:27:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 19:27:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 19:27:22] 
[2025-12-17 19:27:22] 2025-12-17 18:26:30,394 | INFO     | ***************************************
[2025-12-17 19:27:22] 2025-12-17 18:26:30,897 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 19:27:22] 2025-12-17 18:26:30,914 | INFO     | sufficient remaining disk space (85273346048 B)
[2025-12-17 19:27:22] 2025-12-17 18:26:30,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 19:27:22] 2025-12-17 18:26:30,915 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 19:27:22] 2025-12-17 18:26:30,915 | INFO     | update_server=False
[2025-12-17 19:27:22] 2025-12-17 18:26:30,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 19:27:22] 2025-12-17 18:26:30,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:27:22] 2025-12-17 18:26:30,976 | INFO     | all data control threads have been joined
[2025-12-17 19:27:22] 2025-12-17 18:26:31,248 | INFO     | all payload control threads have been joined
[2025-12-17 19:27:22] 2025-12-17 18:26:31,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:27:22] 2025-12-17 18:26:31,337 | INFO     | aborting loop
[2025-12-17 19:27:22] 2025-12-17 18:26:31,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 19:27:22] 2025-12-17 18:26:31,921 | INFO     | [job] retrieve thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:31,921 | INFO     | [job] queue monitor thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:31,982 | INFO     | [data] control thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,094 | INFO     | all job control threads have been joined
[2025-12-17 19:27:22] 2025-12-17 18:26:32,216 | INFO     | [data] copytool_in thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,254 | INFO     | [payload] control thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,271 | INFO     | [payload] validate_post thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,342 | INFO     | [job] job monitor thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,974 | INFO     | [job] validate thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:32,997 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:33,098 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:33,100 | INFO     | [job] control thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:33,193 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:33,302 | INFO     | [payload] failed_post thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:33,678 | INFO     | [data] copytool_out thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:26:34,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 19:27:22] 2025-12-17 18:26:38,202 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 19:27:22] 2025-12-17 18:27:00,731 | INFO     | PID=716780 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 19:27:22] 2025-12-17 18:27:00,731 | INFO     | .. there are 3 such processes running
[2025-12-17 19:27:22] 2025-12-17 18:27:00,732 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 19:27:22] 2025-12-17 18:27:00,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 19:27:22] 2025-12-17 18:27:00,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 19:27:22] 2025-12-17 18:27:15,464 | INFO     | [monitor] cgroup control has ended
[2025-12-17 19:27:22] 2025-12-17 18:27:16,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123550103742272)>', '<ExcThread(monitor, started 123548945340160)>']
[2025-12-17 19:27:22] 2025-12-17 18:27:17,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 19:27:22] 2025-12-17 18:27:17,818 | INFO     | [monitor] control thread has ended
[2025-12-17 19:27:22] 2025-12-17 18:27:21,826 | INFO     | all workflow threads have been joined
[2025-12-17 19:27:22] 2025-12-17 18:27:21,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 19:27:22] 2025-12-17 18:27:21,826 | INFO     | traces error code: 0
[2025-12-17 19:27:22] 2025-12-17 18:27:21,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 19:27:22] 2025-12-17 18:27:21,927 [wrapper] ==== pilot stdout END ====
[2025-12-17 19:27:22] 2025-12-17 18:27:21,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 19:27:22] 2025-12-17 18:27:21,936 [wrapper] pilotpid: 716780
[2025-12-17 19:27:22] 2025-12-17 18:27:21,941 [wrapper] Pilot exit status: 0
[2025-12-17 19:27:22] 2025-12-17 18:27:21,957 [wrapper] pandaids: 6931734957
[2025-12-17 19:27:22] 2025-12-17 18:27:22,007 [wrapper] cleanup supervisor_pilot  760958 716781
[2025-12-17 19:27:22] 2025-12-17 18:27:22,012 [wrapper] Test setup, not cleaning
[2025-12-17 19:27:22] 2025-12-17 18:27:22,017 [wrapper] apfmon messages muted
[2025-12-17 19:27:22] 2025-12-17 18:27:22,022 [wrapper] ==== wrapper stdout END ====
[2025-12-17 19:27:22] 2025-12-17 18:27:22,027 [wrapper] ==== wrapper stderr END ====
[2025-12-17 19:27:22]  *** Error codes and diagnostics ***
[2025-12-17 19:27:22]     "exeErrorCode": 0,
[2025-12-17 19:27:22]     "exeErrorDiag": "",
[2025-12-17 19:27:22]     "pilotErrorCode": 0,
[2025-12-17 19:27:22]     "pilotErrorDiag": "",
[2025-12-17 19:27:22]  *** Listing of results directory ***
[2025-12-17 19:27:22] insgesamt 348240
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc    579449 Dez 17 02:05 pilot3.tar.gz
[2025-12-17 19:27:22] -rwx------ 1 yeti boinc     36322 Dez 17 02:06 runpilot2-wrapper.sh
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc      5112 Dez 17 02:06 queuedata.json
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc       100 Dez 17 18:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 19:27:22] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 18:17 run_atlas
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc       105 Dez 17 18:17 job.xml
[2025-12-17 19:27:22] -rw-r--r-- 2 yeti boinc 194405839 Dez 17 18:17 EVNT.47886829._000655.pool.root.1
[2025-12-17 19:27:22] -rw-r--r-- 2 yeti boinc     15847 Dez 17 18:17 start_atlas.sh
[2025-12-17 19:27:22] drwxrwx--x 2 yeti boinc      4096 Dez 17 18:17 shared
[2025-12-17 19:27:22] -rw-r--r-- 2 yeti boinc    592419 Dez 17 18:17 input.tar.gz
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc      6697 Dez 17 18:17 init_data.xml
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc         0 Dez 17 18:17 boinc_setup_complete
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc         0 Dez 17 18:17 boinc_lockfile
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc      2539 Dez 17 18:17 pandaJob.out
[2025-12-17 19:27:22] -rw------- 1 yeti boinc        52 Dez 17 18:17 setup.sh.local
[2025-12-17 19:27:22] -rw------- 1 yeti boinc    987423 Dez 17 18:18 agis_schedconf.cvmfs.json
[2025-12-17 19:27:22] -rw------- 1 yeti boinc   1516240 Dez 17 18:18 agis_ddmendpoints.agis.ALL.json
[2025-12-17 19:27:22] drwx------ 5 yeti boinc      4096 Dez 17 18:18 pilot3
[2025-12-17 19:27:22] -rw------- 1 yeti boinc 156530239 Dez 17 19:26 HITS.47886831._016402.pool.root.1
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc       529 Dez 17 19:26 boinc_task_state.xml
[2025-12-17 19:27:22] -rw------- 1 yeti boinc      1020 Dez 17 19:26 memory_monitor_summary.json
[2025-12-17 19:27:22] -rw------- 1 yeti boinc    247046 Dez 17 19:26 log.47886831._016402.job.log.tgz.1
[2025-12-17 19:27:22] -rw------- 1 yeti boinc      7732 Dez 17 19:26 heartbeat.json
[2025-12-17 19:27:22] -rw------- 1 yeti boinc        95 Dez 17 19:27 pilot_heartbeat.json
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc        27 Dez 17 19:27 wrapper_checkpoint.txt
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc      8192 Dez 17 19:27 boinc_mmap_file
[2025-12-17 19:27:22] -rw------- 1 yeti boinc      4898 Dez 17 19:27 pilotlog.txt
[2025-12-17 19:27:22] -rw------- 1 yeti boinc    620317 Dez 17 19:27 log.47886831._016402.job.log.1
[2025-12-17 19:27:22] -rw------- 1 yeti boinc       357 Dez 17 19:27 output.list
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc       620 Dez 17 19:27 runtime_log
[2025-12-17 19:27:22] -rw------- 1 yeti boinc    890880 Dez 17 19:27 result.tar.gz
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc      9552 Dez 17 19:27 runtime_log.err
[2025-12-17 19:27:22] -rw------- 1 yeti boinc       640 Dez 17 19:27 PHRNDmuAvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb1aKDm5af4Kn.diag
[2025-12-17 19:27:22] -rw-r--r-- 1 yeti boinc     21289 Dez 17 19:27 stderr.txt
[2025-12-17 19:27:22] HITS file was successfully produced:
[2025-12-17 19:27:22] -rw------- 1 yeti boinc 156530239 Dez 17 19:26 shared/HITS.pool.root.1
[2025-12-17 19:27:22]  *** Contents of shared directory: ***
[2025-12-17 19:27:22] insgesamt 344192
[2025-12-17 19:27:22] -rw-r--r-- 2 yeti boinc 194405839 Dez 17 18:17 ATLAS.root_0
[2025-12-17 19:27:22] -rw-r--r-- 2 yeti boinc     15847 Dez 17 18:17 start_atlas.sh
[2025-12-17 19:27:22] -rw-r--r-- 2 yeti boinc    592419 Dez 17 18:17 input.tar.gz
[2025-12-17 19:27:22] -rw------- 1 yeti boinc 156530239 Dez 17 19:26 HITS.pool.root.1
[2025-12-17 19:27:22] -rw------- 1 yeti boinc    890880 Dez 17 19:27 result.tar.gz
19:27:23 (712947): run_atlas exited; CPU time 15293.692451
19:27:23 (712947): called boinc_finish(0)

</stderr_txt>
]]>

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