Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:37:22 (3974430): wrapper (7.7.26015): starting
13:37:22 (3974430): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 13:37:22] Arguments: --nthreads 12
[2025-12-17 13:37:22] Threads: 12
[2025-12-17 13:37:22] Checking for CVMFS
[2025-12-17 13:37:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:37:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:37:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:37:23] 2.11.0.0 1971323 3445 101904 154112 1 188 3752142 6144001 10941 130560 0 43995093 99.999 129854 181 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-17 13:37:23] CVMFS is ok
[2025-12-17 13:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:37:23] Checking for apptainer binary...
[2025-12-17 13:37:23] apptainer is not installed, using version from CVMFS
[2025-12-17 13:37:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:37:23] radiat0r
[2025-12-17 13:37:23] apptainer works
[2025-12-17 13:37:23] Set ATHENA_PROC_NUMBER=12
[2025-12-17 13:37:23] Set ATHENA_CORE_NUMBER=12
[2025-12-17 13:37:23] Starting ATLAS job with PandaID=6932080275
[2025-12-17 13:37:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 14:58:51]  *** The last 200 lines of the pilot log: ***
[2025-12-17 14:58:51]  status_code=0
[2025-12-17 14:58:51]  storage_token=
[2025-12-17 14:58:51]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6932080275/log.47905890._000487.job.log.tgz.1
[2025-12-17 14:58:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/bd/log.47905890._000487.job.log.tgz.1
[2025-12-17 14:58:51]  workdir=None
[2025-12-17 14:58:51] ]
[2025-12-17 14:58:51] 2025-12-17 14:57:35,956 | INFO     | transferring file log.47905890._000487.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6932080275/log.47905890._000487.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-17 14:58:51] 2025-12-17 14:57:35,957 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6932080275/log.47905890._000487.job.log.tgz.1 /var/lib/boinc/slots/19/log.47905890._000487.j
[2025-12-17 14:58:51] 2025-12-17 14:57:35,984 | INFO     | adding to output.list: log.47905890._000487.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/bd/log.47905890._000487.job.log.tg
[2025-12-17 14:58:51] 2025-12-17 14:57:35,984 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 14:58:51] 2025-12-17 14:57:35,985 | INFO     | summary of transferred files:
[2025-12-17 14:58:51] 2025-12-17 14:57:35,985 | INFO     |  -- lfn=log.47905890._000487.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 14:58:51] 2025-12-17 14:57:35,985 | INFO     | stage-out finished correctly
[2025-12-17 14:58:51] 2025-12-17 14:57:36,040 | INFO     | time since job start (4798s) is within the limit (174528.0s)
[2025-12-17 14:58:51] 2025-12-17 14:57:36,046 | INFO     | 4801s have passed since pilot start - server update state is 'RUNNING'
[2025-12-17 14:58:51] 2025-12-17 14:57:36,367 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 14:58:51] 2025-12-17 14:57:38,062 | INFO     | time since job start (4800s) is within the limit (174528.0s)
[2025-12-17 14:58:51] 2025-12-17 14:57:38,575 | WARNING  | process 3996184 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 14:58:51] 2025-12-17 14:57:38,576 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6932080275/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:58:51] 2025-12-17 14:57:39,123 | INFO     | job 6932080275 has state=finished
[2025-12-17 14:58:51] 2025-12-17 14:57:39,125 | INFO     | preparing for final server update for job 6932080275 in state='finished'
[2025-12-17 14:58:51] 2025-12-17 14:57:39,126 | INFO     | this job has now completed (state=finished)
[2025-12-17 14:58:51] 2025-12-17 14:57:39,129 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 14:58:51] 2025-12-17 14:57:39,129 | INFO     | log transfer has been attempted: DONE
[2025-12-17 14:58:51] 2025-12-17 14:57:39,129 | INFO     | job 6932080275 has finished - writing final server update
[2025-12-17 14:58:51] 2025-12-17 14:57:39,129 | INFO     | total number of processed events: 400 (read)
[2025-12-17 14:58:51] 2025-12-17 14:57:39,130 | INFO     | executing command: lscpu
[2025-12-17 14:58:51] 2025-12-17 14:57:39,322 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 14:58:51] 2025-12-17 14:57:39,426 | INFO     | number of running child processes to parent process 3996184: 1
[2025-12-17 14:58:51] 2025-12-17 14:57:39,427 | INFO     | maximum number of monitored processes: 6
[2025-12-17 14:58:51] 2025-12-17 14:57:40,068 | INFO     | time since job start (4802s) is within the limit (174528.0s)
[2025-12-17 14:58:51] 2025-12-17 14:57:41,930 | INFO     | monitor loop #330: job 0:6932080275 is in state 'finished'
[2025-12-17 14:58:51] 2025-12-17 14:57:41,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:58:51] 2025-12-17 14:57:42,071 | INFO     | time since job start (4804s) is within the limit (174528.0s)
[2025-12-17 14:58:51] 2025-12-17 14:57:44,077 | INFO     | time since job start (4806s) is within the limit (174528.0s)
[2025-12-17 14:58:51] 2025-12-17 14:57:44,434 | INFO     | monitor loop #331: job 0:6932080275 is in state 'finished'
[2025-12-17 14:58:51] 2025-12-17 14:57:44,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,529 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 14:58:51] 2025-12-17 14:57:45,568 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2436.6658046875004
[2025-12-17 14:58:51] 2025-12-17 14:57:45,640 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6932080275/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,641 | INFO     | extracted standard info from prmon json
[2025-12-17 14:58:51] 2025-12-17 14:57:45,641 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 14:58:51] 2025-12-17 14:57:45,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 14:58:51] 2025-12-17 14:57:45,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 14:58:51] 2025-12-17 14:57:45,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 14:58:51] 2025-12-17 14:57:45,643 | INFO     | fitting pss+swap vs Time
[2025-12-17 14:58:51] 2025-12-17 14:57:45,643 | INFO     | sum of square deviations: 115715658.0
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | sum of deviations: 5490693600.499999
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | mean x: 1765981160.5
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | mean y: 2674070.902777778
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | intersect: -83792912664.30736
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | chi2: 0.09803582499402254
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | current memory leak: 47.45 B/s (using 72 data points, chi2=0.10)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,644 | INFO     | could have reported an average CPU frequency of 2414 MHz (6 samples)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | ..............................
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . Timing measurements:
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . get job = 0 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . initial setup = 3 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . payload setup = 7 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . stage-in = 0 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . payload execution = 4767 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . stage-out = 0 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | . log creation = 0 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,645 | INFO     | ..............................
[2025-12-17 14:58:51] 2025-12-17 14:57:45,737 | INFO     | 
[2025-12-17 14:58:51] 2025-12-17 14:57:45,737 | INFO     | job summary report
[2025-12-17 14:58:51] 2025-12-17 14:57:45,737 | INFO     | --------------------------------------------------
[2025-12-17 14:58:51] 2025-12-17 14:57:45,737 | INFO     | PanDA job id: 6932080275
[2025-12-17 14:58:51] 2025-12-17 14:57:45,737 | INFO     | task id: 47905890
[2025-12-17 14:58:51] 2025-12-17 14:57:45,737 | INFO     | errors: (none)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | pilot state: finished 
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | transexitcode: 0
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | exeerrorcode: 0
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | exeerrordiag: 
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | exitcode: 0
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | exitmsg: OK
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | cpuconsumptiontime: 50074 s
[2025-12-17 14:58:51] 2025-12-17 14:57:45,738 | INFO     | nevents: 400
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | neventsw: 0
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | pid: 3996184
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | pgrp: 3996184
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | corecount: 12
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | event service: False
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | sizes: {0: 2283700, 1: 2283899, 6: 2284161, 11: 2284189, 4779: 2310536, 4780: 2319719, 4781: 2319719, 4790: 2319913}
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | --------------------------------------------------
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | 
[2025-12-17 14:58:51] 2025-12-17 14:57:45,739 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-12-17 14:58:51] 2025-12-17 14:57:45,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | job 6932080275 has completed (purged errors)
[2025-12-17 14:58:51] 2025-12-17 14:57:45,772 | INFO     | overall cleanup function is called
[2025-12-17 14:58:51] 2025-12-17 14:57:46,779 | INFO     | --- collectZombieJob: --- 10, [3996184]
[2025-12-17 14:58:51] 2025-12-17 14:57:46,779 | INFO     | zombie collector waiting for pid 3996184
[2025-12-17 14:58:51] 2025-12-17 14:57:46,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 14:58:51] 2025-12-17 14:57:46,780 | INFO     | collected zombie processes
[2025-12-17 14:58:51] 2025-12-17 14:57:46,780 | INFO     | will attempt to kill all subprocesses of pid=3996184
[2025-12-17 14:58:51] 2025-12-17 14:57:47,650 | INFO     | process IDs to be killed: [3996184] (in reverse order)
[2025-12-17 14:58:51] 2025-12-17 14:57:47,919 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 14:58:51] 2025-12-17 14:57:47,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 14:58:51] 2025-12-17 14:57:47,948 | INFO     | did not find any defunct processes belonging to 3996184
[2025-12-17 14:58:51] 2025-12-17 14:57:47,974 | INFO     | did not find any defunct processes belonging to 3996184
[2025-12-17 14:58:51] 2025-12-17 14:57:47,974 | INFO     | ready for new job
[2025-12-17 14:58:51] 2025-12-17 14:57:47,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 14:58:51] 2025-12-17 14:57:47,977 | INFO     | ***************************************
[2025-12-17 14:58:51] 2025-12-17 14:57:47,977 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 14:58:51] 2025-12-17 14:57:47,977 | INFO     | ***************************************
[2025-12-17 14:58:51] 2025-12-17 14:57:47,977 | INFO     | 
[2025-12-17 14:58:51] 2025-12-17 14:57:48,013 | INFO     | architecture information:
[2025-12-17 14:58:51] 2025-12-17 14:57:48,014 | INFO     | executing command: cat /etc/os-release
[2025-12-17 14:58:51] 2025-12-17 14:57:48,036 | INFO     | cat /etc/os-release:
[2025-12-17 14:58:51] NAME="CentOS Linux"
[2025-12-17 14:58:51] VERSION="7 (Core)"
[2025-12-17 14:58:51] ID="centos"
[2025-12-17 14:58:51] ID_LIKE="rhel fedora"
[2025-12-17 14:58:51] VERSION_ID="7"
[2025-12-17 14:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 14:58:51] ANSI_COLOR="0;31"
[2025-12-17 14:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 14:58:51] HOME_URL="https://www.centos.org/"
[2025-12-17 14:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 14:58:51] 
[2025-12-17 14:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 14:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 14:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 14:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 14:58:51] 
[2025-12-17 14:58:51] 2025-12-17 14:57:48,037 | INFO     | ***************************************
[2025-12-17 14:58:51] 2025-12-17 14:57:48,539 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-12-17 14:58:51] 2025-12-17 14:57:48,566 | INFO     | sufficient remaining disk space (1701537906688 B)
[2025-12-17 14:58:51] 2025-12-17 14:57:48,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 14:58:51] 2025-12-17 14:57:48,567 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 14:58:51] 2025-12-17 14:57:48,567 | INFO     | update_server=False
[2025-12-17 14:58:51] 2025-12-17 14:57:48,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 14:58:51] 2025-12-17 14:57:48,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:58:51] 2025-12-17 14:57:48,568 | INFO     | aborting loop
[2025-12-17 14:58:51] 2025-12-17 14:57:49,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 14:58:51] 2025-12-17 14:57:49,334 | INFO     | all job control threads have been joined
[2025-12-17 14:58:51] 2025-12-17 14:57:49,437 | INFO     | all data control threads have been joined
[2025-12-17 14:58:51] 2025-12-17 14:57:49,540 | INFO     | all payload control threads have been joined
[2025-12-17 14:58:51] 2025-12-17 14:57:49,573 | INFO     | [job] retrieve thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:49,574 | INFO     | [job] job monitor thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:49,599 | INFO     | [job] validate thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:49,689 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:49,996 | INFO     | [data] copytool_in thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,002 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,008 | INFO     | [payload] failed_post thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,339 | INFO     | [job] control thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,442 | INFO     | [data] control thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,545 | INFO     | [payload] control thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,604 | INFO     | [payload] validate_post thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:50,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:58:51] 2025-12-17 14:57:51,000 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:51,096 | INFO     | [data] copytool_out thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:51,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 14:58:51] 2025-12-17 14:57:51,753 | INFO     | [job] queue monitor thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:55,467 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:57:59,533 | INFO     | job.realtimelogging is not enabled
[2025-12-17 14:58:51] 2025-12-17 14:58:00,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 14:58:51] 2025-12-17 14:58:18,147 | INFO     | PID=3987954 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 14:58:51] 2025-12-17 14:58:18,147 | INFO     | .. there are 14 such processes running
[2025-12-17 14:58:51] 2025-12-17 14:58:18,148 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 14:58:51] 2025-12-17 14:58:18,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 14:58:51] 2025-12-17 14:58:18,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 14:58:51] 2025-12-17 14:58:45,265 | INFO     | [monitor] cgroup control has ended
[2025-12-17 14:58:51] 2025-12-17 14:58:46,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330138240832)>', '<ExcThread(monitor, started 140329684539136)>']
[2025-12-17 14:58:51] 2025-12-17 14:58:47,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 14:58:51] 2025-12-17 14:58:47,289 | INFO     | [monitor] control thread has ended
[2025-12-17 14:58:51] 2025-12-17 14:58:51,308 | INFO     | all workflow threads have been joined
[2025-12-17 14:58:51] 2025-12-17 14:58:51,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 14:58:51] 2025-12-17 14:58:51,309 | INFO     | traces error code: 0
[2025-12-17 14:58:51] 2025-12-17 14:58:51,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 14:58:51] 2025-12-17 14:58:51,454 [wrapper] ==== pilot stdout END ====
[2025-12-17 14:58:51] 2025-12-17 14:58:51,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 14:58:51] 2025-12-17 14:58:51,462 [wrapper] pilotpid: 3987954
[2025-12-17 14:58:51] 2025-12-17 14:58:51,466 [wrapper] Pilot exit status: 0
[2025-12-17 14:58:51] 2025-12-17 14:58:51,480 [wrapper] pandaids: 6932080275
[2025-12-17 14:58:51] 2025-12-17 14:58:51,652 [wrapper] cleanup supervisor_pilot   94964 3987955
[2025-12-17 14:58:51] 2025-12-17 14:58:51,656 [wrapper] Test setup, not cleaning
[2025-12-17 14:58:51] 2025-12-17 14:58:51,659 [wrapper] apfmon messages muted
[2025-12-17 14:58:51] 2025-12-17 14:58:51,663 [wrapper] ==== wrapper stdout END ====
[2025-12-17 14:58:51] 2025-12-17 14:58:51,666 [wrapper] ==== wrapper stderr END ====
[2025-12-17 14:58:51]  *** Error codes and diagnostics ***
[2025-12-17 14:58:51]     "exeErrorCode": 0,
[2025-12-17 14:58:51]     "exeErrorDiag": "",
[2025-12-17 14:58:51]     "pilotErrorCode": 0,
[2025-12-17 14:58:51]     "pilotErrorDiag": "",
[2025-12-17 14:58:51]  *** Listing of results directory ***
[2025-12-17 14:58:51] total 399868
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc    579449 Dec 17 03:48 pilot3.tar.gz
[2025-12-17 14:58:51] -rwx------ 1 boinc boinc     36322 Dec 17 03:49 runpilot2-wrapper.sh
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc      5112 Dec 17 03:50 queuedata.json
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc       100 Dec 17 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 14:58:51] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 13:37 run_atlas
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc       105 Dec 17 13:37 job.xml
[2025-12-17 14:58:51] -rw-r--r-- 2 boinc boinc 197377845 Dec 17 13:37 EVNT.47905888._000018.pool.root.1
[2025-12-17 14:58:51] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:37 start_atlas.sh
[2025-12-17 14:58:51] drwxrwx--x 2 boinc boinc      4096 Dec 17 13:37 shared
[2025-12-17 14:58:51] -rw-r--r-- 2 boinc boinc    592380 Dec 17 13:37 input.tar.gz
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc      9417 Dec 17 13:37 init_data.xml
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:37 boinc_setup_complete
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:37 boinc_lockfile
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc      2445 Dec 17 13:37 pandaJob.out
[2025-12-17 14:58:51] -rw------- 1 boinc boinc    987423 Dec 17 13:37 agis_schedconf.cvmfs.json
[2025-12-17 14:58:51] -rw------- 1 boinc boinc   1516240 Dec 17 13:37 agis_ddmendpoints.agis.ALL.json
[2025-12-17 14:58:51] drwx------ 5 boinc boinc      4096 Dec 17 13:37 pilot3
[2025-12-17 14:58:51] -rw------- 1 boinc boinc 206016576 Dec 17 14:56 HITS.47905890._000487.pool.root.1
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc       529 Dec 17 14:57 boinc_task_state.xml
[2025-12-17 14:58:51] -rw------- 1 boinc boinc      1028 Dec 17 14:57 memory_monitor_summary.json
[2025-12-17 14:58:51] -rw------- 1 boinc boinc    385845 Dec 17 14:57 log.47905890._000487.job.log.tgz.1
[2025-12-17 14:58:51] -rw------- 1 boinc boinc      7735 Dec 17 14:57 heartbeat.json
[2025-12-17 14:58:51] -rw------- 1 boinc boinc        95 Dec 17 14:58 pilot_heartbeat.json
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc      8192 Dec 17 14:58 boinc_mmap_file
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc        27 Dec 17 14:58 wrapper_checkpoint.txt
[2025-12-17 14:58:51] -rw------- 1 boinc boinc      4900 Dec 17 14:58 pilotlog.txt
[2025-12-17 14:58:51] -rw------- 1 boinc boinc    687538 Dec 17 14:58 log.47905890._000487.job.log.1
[2025-12-17 14:58:51] -rw------- 1 boinc boinc       357 Dec 17 14:58 output.list
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc       620 Dec 17 14:58 runtime_log
[2025-12-17 14:58:51] -rw------- 1 boinc boinc   1095680 Dec 17 14:58 result.tar.gz
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc      8788 Dec 17 14:58 runtime_log.err
[2025-12-17 14:58:51] -rw------- 1 boinc boinc       642 Dec 17 14:58 bUWKDm4ixp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQIbKDmwJBZZn.diag
[2025-12-17 14:58:51] -rw-r--r-- 1 boinc boinc     21890 Dec 17 14:58 stderr.txt
[2025-12-17 14:58:51] HITS file was successfully produced:
[2025-12-17 14:58:51] -rw------- 1 boinc boinc 206016576 Dec 17 14:56 shared/HITS.pool.root.1
[2025-12-17 14:58:51]  *** Contents of shared directory: ***
[2025-12-17 14:58:51] total 395620
[2025-12-17 14:58:51] -rw-r--r-- 2 boinc boinc 197377845 Dec 17 13:37 ATLAS.root_0
[2025-12-17 14:58:51] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:37 start_atlas.sh
[2025-12-17 14:58:51] -rw-r--r-- 2 boinc boinc    592380 Dec 17 13:37 input.tar.gz
[2025-12-17 14:58:51] -rw------- 1 boinc boinc 206016576 Dec 17 14:56 HITS.pool.root.1
[2025-12-17 14:58:51] -rw------- 1 boinc boinc   1095680 Dec 17 14:58 result.tar.gz
14:58:53 (3974430): run_atlas exited; CPU time 50387.573276
14:58:53 (3974430): called boinc_finish(0)

</stderr_txt>
]]>

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