Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:36:47 (3955520): wrapper (7.7.26015): starting
13:36:47 (3955520): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 13:36:47] Arguments: --nthreads 12
[2025-12-17 13:36:47] Threads: 12
[2025-12-17 13:36:47] Checking for CVMFS
[2025-12-17 13:36:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:36:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:36:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:36:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:36:47] 2.11.0.0 1971323 3444 101636 154112 2 188 3752142 6144001 10395 130560 0 43955238 99.999 129854 181 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-17 13:36:47] CVMFS is ok
[2025-12-17 13:36:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:36:47] Checking for apptainer binary...
[2025-12-17 13:36:47] apptainer is not installed, using version from CVMFS
[2025-12-17 13:36:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:36:47] radiat0r
[2025-12-17 13:36:47] apptainer works
[2025-12-17 13:36:47] Set ATHENA_PROC_NUMBER=12
[2025-12-17 13:36:47] Set ATHENA_CORE_NUMBER=12
[2025-12-17 13:36:47] Starting ATLAS job with PandaID=6932080215
[2025-12-17 13:36:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 14:52:35]  *** The last 200 lines of the pilot log: ***
[2025-12-17 14:52:35]  status=None
[2025-12-17 14:52:35]  status_code=0
[2025-12-17 14:52:35]  storage_token=
[2025-12-17 14:52:35]  surl=/var/lib/boinc/slots/10/PanDA_Pilot-6932080215/log.47905890._000427.job.log.tgz.1
[2025-12-17 14:52:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/32/log.47905890._000427.job.log.tgz.1
[2025-12-17 14:52:35]  workdir=None
[2025-12-17 14:52:35] ]
[2025-12-17 14:52:35] 2025-12-17 14:51:54,088 | INFO     | transferring file log.47905890._000427.job.log.tgz.1 from /var/lib/boinc/slots/10/PanDA_Pilot-6932080215/log.47905890._000427.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-17 14:52:35] 2025-12-17 14:51:54,088 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/10/PanDA_Pilot-6932080215/log.47905890._000427.job.log.tgz.1 /var/lib/boinc/slots/10/log.47905890._000427.j
[2025-12-17 14:52:35] 2025-12-17 14:51:54,108 | INFO     | adding to output.list: log.47905890._000427.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/32/log.47905890._000427.job.log.tg
[2025-12-17 14:52:35] 2025-12-17 14:51:54,109 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 14:52:35] 2025-12-17 14:51:54,109 | INFO     | summary of transferred files:
[2025-12-17 14:52:35] 2025-12-17 14:51:54,109 | INFO     |  -- lfn=log.47905890._000427.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 14:52:35] 2025-12-17 14:51:54,109 | INFO     | stage-out finished correctly
[2025-12-17 14:52:35] 2025-12-17 14:51:55,304 | INFO     | time since job start (4496s) is within the limit (174528.0s)
[2025-12-17 14:52:35] 2025-12-17 14:51:55,554 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 14:52:35] 2025-12-17 14:51:55,655 | INFO     | job 6932080215 has state=finished
[2025-12-17 14:52:35] 2025-12-17 14:51:55,656 | INFO     | preparing for final server update for job 6932080215 in state='finished'
[2025-12-17 14:52:35] 2025-12-17 14:51:55,657 | INFO     | this job has now completed (state=finished)
[2025-12-17 14:52:35] 2025-12-17 14:51:55,657 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 14:52:35] 2025-12-17 14:51:55,657 | INFO     | log transfer has been attempted: DONE
[2025-12-17 14:52:35] 2025-12-17 14:51:55,657 | INFO     | job 6932080215 has finished - writing final server update
[2025-12-17 14:52:35] 2025-12-17 14:51:55,657 | INFO     | total number of processed events: 400 (read)
[2025-12-17 14:52:35] 2025-12-17 14:51:55,659 | INFO     | executing command: lscpu
[2025-12-17 14:52:35] 2025-12-17 14:51:55,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 14:52:35] 2025-12-17 14:51:56,301 | WARNING  | process 3975655 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 14:52:35] 2025-12-17 14:51:56,302 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6932080215/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:52:35] 2025-12-17 14:51:57,087 | INFO     | number of running child processes to parent process 3975655: 1
[2025-12-17 14:52:35] 2025-12-17 14:51:57,087 | INFO     | maximum number of monitored processes: 6
[2025-12-17 14:52:35] 2025-12-17 14:51:57,312 | INFO     | time since job start (4498s) is within the limit (174528.0s)
[2025-12-17 14:52:35] 2025-12-17 14:51:57,404 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-12-17 14:52:35] 2025-12-17 14:51:59,317 | INFO     | time since job start (4500s) is within the limit (174528.0s)
[2025-12-17 14:52:35] 2025-12-17 14:51:59,590 | INFO     | monitor loop #311: job 0:6932080215 is in state 'finished'
[2025-12-17 14:52:35] 2025-12-17 14:51:59,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,323 | INFO     | time since job start (4502s) is within the limit (174528.0s)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,610 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 14:52:35] 2025-12-17 14:52:01,658 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2429.6534062499995
[2025-12-17 14:52:35] 2025-12-17 14:52:01,747 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6932080215/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,748 | INFO     | extracted standard info from prmon json
[2025-12-17 14:52:35] 2025-12-17 14:52:01,748 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 14:52:35] 2025-12-17 14:52:01,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 14:52:35] 2025-12-17 14:52:01,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 14:52:35] 2025-12-17 14:52:01,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 14:52:35] 2025-12-17 14:52:01,751 | INFO     | fitting pss+swap vs Time
[2025-12-17 14:52:35] 2025-12-17 14:52:01,751 | INFO     | sum of square deviations: 93240818.0
[2025-12-17 14:52:35] 2025-12-17 14:52:01,751 | INFO     | sum of deviations: 1435660009.9999998
[2025-12-17 14:52:35] 2025-12-17 14:52:01,752 | INFO     | mean x: 1765980968.0
[2025-12-17 14:52:35] 2025-12-17 14:52:01,752 | INFO     | mean y: 2690328.1641791044
[2025-12-17 14:52:35] 2025-12-17 14:52:01,752 | INFO     | intersect: -27188708337.80086
[2025-12-17 14:52:35] 2025-12-17 14:52:01,752 | INFO     | chi2: 0.00333229914327925
[2025-12-17 14:52:35] 2025-12-17 14:52:01,752 | INFO     | current memory leak: 15.40 B/s (using 67 data points, chi2=0.00)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,752 | INFO     | could have reported an average CPU frequency of 2411 MHz (6 samples)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | ..............................
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . Timing measurements:
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . get job = 0 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . initial setup = 1 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . payload setup = 7 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . stage-in = 0 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . payload execution = 4465 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . stage-out = 0 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | . log creation = 0 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,753 | INFO     | ..............................
[2025-12-17 14:52:35] 2025-12-17 14:52:01,856 | INFO     | 
[2025-12-17 14:52:35] 2025-12-17 14:52:01,856 | INFO     | job summary report
[2025-12-17 14:52:35] 2025-12-17 14:52:01,856 | INFO     | --------------------------------------------------
[2025-12-17 14:52:35] 2025-12-17 14:52:01,856 | INFO     | PanDA job id: 6932080215
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | task id: 47905890
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | errors: (none)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | pilot state: finished 
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | transexitcode: 0
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | exeerrorcode: 0
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | exeerrordiag: 
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | exitcode: 0
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | exitmsg: OK
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | cpuconsumptiontime: 48461 s
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | nevents: 400
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | neventsw: 0
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | pid: 3975655
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | pgrp: 3975655
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | corecount: 12
[2025-12-17 14:52:35] 2025-12-17 14:52:01,857 | INFO     | event service: False
[2025-12-17 14:52:35] 2025-12-17 14:52:01,858 | INFO     | sizes: {0: 2283869, 7: 2284131, 11: 2284159, 4477: 2310508, 4478: 2319508, 4479: 2319564, 4485: 2319886}
[2025-12-17 14:52:35] 2025-12-17 14:52:01,858 | INFO     | --------------------------------------------------
[2025-12-17 14:52:35] 2025-12-17 14:52:01,858 | INFO     | 
[2025-12-17 14:52:35] 2025-12-17 14:52:01,858 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-17 14:52:35] 2025-12-17 14:52:01,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | job 6932080215 has completed (purged errors)
[2025-12-17 14:52:35] 2025-12-17 14:52:01,888 | INFO     | overall cleanup function is called
[2025-12-17 14:52:35] 2025-12-17 14:52:02,895 | INFO     | --- collectZombieJob: --- 10, [3975655]
[2025-12-17 14:52:35] 2025-12-17 14:52:02,895 | INFO     | zombie collector waiting for pid 3975655
[2025-12-17 14:52:35] 2025-12-17 14:52:02,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 14:52:35] 2025-12-17 14:52:02,895 | INFO     | collected zombie processes
[2025-12-17 14:52:35] 2025-12-17 14:52:02,895 | INFO     | will attempt to kill all subprocesses of pid=3975655
[2025-12-17 14:52:35] 2025-12-17 14:52:03,700 | INFO     | process IDs to be killed: [3975655] (in reverse order)
[2025-12-17 14:52:35] 2025-12-17 14:52:03,917 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 14:52:35] 2025-12-17 14:52:03,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 14:52:35] 2025-12-17 14:52:03,946 | INFO     | did not find any defunct processes belonging to 3975655
[2025-12-17 14:52:35] 2025-12-17 14:52:03,970 | INFO     | did not find any defunct processes belonging to 3975655
[2025-12-17 14:52:35] 2025-12-17 14:52:03,970 | INFO     | ready for new job
[2025-12-17 14:52:35] 2025-12-17 14:52:03,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 14:52:35] 2025-12-17 14:52:03,973 | INFO     | ***************************************
[2025-12-17 14:52:35] 2025-12-17 14:52:03,973 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 14:52:35] 2025-12-17 14:52:03,973 | INFO     | ***************************************
[2025-12-17 14:52:35] 2025-12-17 14:52:03,973 | INFO     | 
[2025-12-17 14:52:35] 2025-12-17 14:52:03,990 | INFO     | architecture information:
[2025-12-17 14:52:35] 2025-12-17 14:52:03,991 | INFO     | executing command: cat /etc/os-release
[2025-12-17 14:52:35] 2025-12-17 14:52:04,011 | INFO     | cat /etc/os-release:
[2025-12-17 14:52:35] NAME="CentOS Linux"
[2025-12-17 14:52:35] VERSION="7 (Core)"
[2025-12-17 14:52:35] ID="centos"
[2025-12-17 14:52:35] ID_LIKE="rhel fedora"
[2025-12-17 14:52:35] VERSION_ID="7"
[2025-12-17 14:52:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 14:52:35] ANSI_COLOR="0;31"
[2025-12-17 14:52:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 14:52:35] HOME_URL="https://www.centos.org/"
[2025-12-17 14:52:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 14:52:35] 
[2025-12-17 14:52:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 14:52:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 14:52:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 14:52:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 14:52:35] 
[2025-12-17 14:52:35] 2025-12-17 14:52:04,012 | INFO     | ***************************************
[2025-12-17 14:52:35] 2025-12-17 14:52:04,515 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-17 14:52:35] 2025-12-17 14:52:04,534 | INFO     | sufficient remaining disk space (1700428513280 B)
[2025-12-17 14:52:35] 2025-12-17 14:52:04,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 14:52:35] 2025-12-17 14:52:04,535 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 14:52:35] 2025-12-17 14:52:04,535 | INFO     | update_server=False
[2025-12-17 14:52:35] 2025-12-17 14:52:04,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 14:52:35] 2025-12-17 14:52:04,599 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 14:52:35] 2025-12-17 14:52:04,599 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 14:52:35] 2025-12-17 14:52:04,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:52:35] 2025-12-17 14:52:04,600 | INFO     | will abort loop
[2025-12-17 14:52:35] 2025-12-17 14:52:04,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 14:52:35] 2025-12-17 14:52:05,342 | INFO     | all data control threads have been joined
[2025-12-17 14:52:35] 2025-12-17 14:52:05,540 | INFO     | [job] retrieve thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:05,552 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:05,602 | INFO     | [payload] validate_post thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:05,604 | INFO     | [job] job monitor thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:05,832 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:05,902 | INFO     | [data] copytool_in thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:05,933 | INFO     | all job control threads have been joined
[2025-12-17 14:52:35] 2025-12-17 14:52:05,989 | INFO     | all payload control threads have been joined
[2025-12-17 14:52:35] 2025-12-17 14:52:06,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 14:52:35] 2025-12-17 14:52:06,215 | INFO     | [monitor] cgroup control has ended
[2025-12-17 14:52:35] 2025-12-17 14:52:06,279 | INFO     | [payload] failed_post thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:06,320 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:06,347 | INFO     | [data] control thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:06,696 | INFO     | [data] copytool_out thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:06,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:52:35] 2025-12-17 14:52:06,891 | INFO     | [job] validate thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:06,939 | INFO     | [job] control thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:06,994 | INFO     | [payload] control thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:07,867 | INFO     | [job] queue monitor thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:10,159 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:15,010 | INFO     | job.realtimelogging is not enabled
[2025-12-17 14:52:35] 2025-12-17 14:52:16,015 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 14:52:35] 2025-12-17 14:52:16,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618145421120)>', '<ExcThread(monitor, started 140617497704192)>']
[2025-12-17 14:52:35] 2025-12-17 14:52:21,561 | INFO     | all workflow threads have been joined
[2025-12-17 14:52:35] 2025-12-17 14:52:21,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 14:52:35] 2025-12-17 14:52:21,561 | INFO     | traces error code: 0
[2025-12-17 14:52:35] 2025-12-17 14:52:21,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 14:52:35] 2025-12-17 14:52:35,206 | INFO     | PID=3966939 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 14:52:35] 2025-12-17 14:52:35,206 | INFO     | .. there are 14 such processes running
[2025-12-17 14:52:35] 2025-12-17 14:52:35,207 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 14:52:35] 2025-12-17 14:52:35,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 14:52:35] 2025-12-17 14:52:35,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 14:52:35] 2025-12-17 14:52:35,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 14:52:35] 2025-12-17 14:52:35,207 | INFO     | [monitor] control thread has ended
[2025-12-17 14:52:35] 2025-12-17 14:52:35,351 [wrapper] ==== pilot stdout END ====
[2025-12-17 14:52:35] 2025-12-17 14:52:35,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 14:52:35] 2025-12-17 14:52:35,358 [wrapper] pilotpid: 3966939
[2025-12-17 14:52:35] 2025-12-17 14:52:35,362 [wrapper] Pilot exit status: 0
[2025-12-17 14:52:35] 2025-12-17 14:52:35,373 [wrapper] pandaids: 6932080215
[2025-12-17 14:52:35] 2025-12-17 14:52:35,501 [wrapper] cleanup supervisor_pilot   80841 3966940
[2025-12-17 14:52:35] 2025-12-17 14:52:35,504 [wrapper] Test setup, not cleaning
[2025-12-17 14:52:35] 2025-12-17 14:52:35,508 [wrapper] apfmon messages muted
[2025-12-17 14:52:35] 2025-12-17 14:52:35,510 [wrapper] ==== wrapper stdout END ====
[2025-12-17 14:52:35] 2025-12-17 14:52:35,513 [wrapper] ==== wrapper stderr END ====
[2025-12-17 14:52:35]  *** Error codes and diagnostics ***
[2025-12-17 14:52:35]     "exeErrorCode": 0,
[2025-12-17 14:52:35]     "exeErrorDiag": "",
[2025-12-17 14:52:35]     "pilotErrorCode": 0,
[2025-12-17 14:52:35]     "pilotErrorDiag": "",
[2025-12-17 14:52:35]  *** Listing of results directory ***
[2025-12-17 14:52:35] total 397324
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc    579449 Dec 17 03:48 pilot3.tar.gz
[2025-12-17 14:52:35] -rwx------ 1 boinc boinc     36322 Dec 17 03:49 runpilot2-wrapper.sh
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc      5112 Dec 17 03:50 queuedata.json
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc       100 Dec 17 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 14:52:35] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 13:36 run_atlas
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc       105 Dec 17 13:36 job.xml
[2025-12-17 14:52:35] -rw-r--r-- 2 boinc boinc 196411407 Dec 17 13:36 EVNT.47905888._000016.pool.root.1
[2025-12-17 14:52:35] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:36 start_atlas.sh
[2025-12-17 14:52:35] drwxrwx--x 2 boinc boinc      4096 Dec 17 13:36 shared
[2025-12-17 14:52:35] -rw-r--r-- 2 boinc boinc    592377 Dec 17 13:36 input.tar.gz
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc      9417 Dec 17 13:36 init_data.xml
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:36 boinc_setup_complete
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:36 boinc_lockfile
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc      2444 Dec 17 13:36 pandaJob.out
[2025-12-17 14:52:35] -rw------- 1 boinc boinc    987423 Dec 17 13:36 agis_schedconf.cvmfs.json
[2025-12-17 14:52:35] -rw------- 1 boinc boinc   1516240 Dec 17 13:36 agis_ddmendpoints.agis.ALL.json
[2025-12-17 14:52:35] drwx------ 5 boinc boinc      4096 Dec 17 13:36 pilot3
[2025-12-17 14:52:35] -rw------- 1 boinc boinc 204493281 Dec 17 14:51 HITS.47905890._000427.pool.root.1
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc       529 Dec 17 14:51 boinc_task_state.xml
[2025-12-17 14:52:35] -rw------- 1 boinc boinc      1027 Dec 17 14:51 memory_monitor_summary.json
[2025-12-17 14:52:35] -rw------- 1 boinc boinc    369364 Dec 17 14:51 log.47905890._000427.job.log.tgz.1
[2025-12-17 14:52:35] -rw------- 1 boinc boinc      7731 Dec 17 14:52 heartbeat.json
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc      8192 Dec 17 14:52 boinc_mmap_file
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc        27 Dec 17 14:52 wrapper_checkpoint.txt
[2025-12-17 14:52:35] -rw------- 1 boinc boinc        95 Dec 17 14:52 pilot_heartbeat.json
[2025-12-17 14:52:35] -rw------- 1 boinc boinc       823 Dec 17 14:52 pilotlog.txt
[2025-12-17 14:52:35] -rw------- 1 boinc boinc    648265 Dec 17 14:52 log.47905890._000427.job.log.1
[2025-12-17 14:52:35] -rw------- 1 boinc boinc       357 Dec 17 14:52 output.list
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc       620 Dec 17 14:52 runtime_log
[2025-12-17 14:52:35] -rw------- 1 boinc boinc   1034240 Dec 17 14:52 result.tar.gz
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc      8788 Dec 17 14:52 runtime_log.err
[2025-12-17 14:52:35] -rw------- 1 boinc boinc       642 Dec 17 14:52 HneMDm3ixp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWnWKDmfLgaEn.diag
[2025-12-17 14:52:35] -rw-r--r-- 1 boinc boinc     21737 Dec 17 14:52 stderr.txt
[2025-12-17 14:52:35] HITS file was successfully produced:
[2025-12-17 14:52:35] -rw------- 1 boinc boinc 204493281 Dec 17 14:51 shared/HITS.pool.root.1
[2025-12-17 14:52:35]  *** Contents of shared directory: ***
[2025-12-17 14:52:35] total 393132
[2025-12-17 14:52:35] -rw-r--r-- 2 boinc boinc 196411407 Dec 17 13:36 ATLAS.root_0
[2025-12-17 14:52:35] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:36 start_atlas.sh
[2025-12-17 14:52:35] -rw-r--r-- 2 boinc boinc    592377 Dec 17 13:36 input.tar.gz
[2025-12-17 14:52:35] -rw------- 1 boinc boinc 204493281 Dec 17 14:51 HITS.pool.root.1
[2025-12-17 14:52:35] -rw------- 1 boinc boinc   1034240 Dec 17 14:52 result.tar.gz
14:52:37 (3955520): run_atlas exited; CPU time 48728.621288
14:52:37 (3955520): called boinc_finish(0)

</stderr_txt>
]]>

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