Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:23:36 (556086): wrapper (7.7.26015): starting
20:23:36 (556086): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 20:23:36] Arguments: --nthreads 4
[2025-12-17 20:23:36] Threads: 4
[2025-12-17 20:23:36] Checking for CVMFS
[2025-12-17 20:23:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 20:23:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 20:23:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 20:23:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 20:23:37] 2.13.1.0 45898 5683 105280 154121 3 57 7183702 10240001 1822 130560 0 11196120 99.996 211804 278 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 20:23:37] CVMFS is ok
[2025-12-17 20:23:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 20:23:37] Checking for apptainer binary...
[2025-12-17 20:23:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 20:23:37] Running /usr/bin/apptainer --version
[2025-12-17 20:23:37] apptainer version 1.4.4
[2025-12-17 20:23:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 20:23:37] ellievl
[2025-12-17 20:23:37] apptainer works
[2025-12-17 20:23:37] Set ATHENA_PROC_NUMBER=4
[2025-12-17 20:23:37] Set ATHENA_CORE_NUMBER=4
[2025-12-17 20:23:37] Starting ATLAS job with PandaID=6931736701
[2025-12-17 20:23:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 22:28:10]  *** The last 200 lines of the pilot log: ***
[2025-12-17 22:28:10] 2025-12-17 21:27:30,375 | INFO     | .. there are 3 such processes running
[2025-12-17 22:28:10] 2025-12-17 21:27:30,875 | INFO     | monitor loop #548: job 0:6931736701 is in state 'finished'
[2025-12-17 22:28:10] 2025-12-17 21:27:30,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 22:28:10] 2025-12-17 21:27:31,376 | INFO     | time since job start (7415s) is within the limit (174528.0s)
[2025-12-17 22:28:10] 2025-12-17 21:27:33,379 | INFO     | monitor loop #549: job 0:6931736701 is in state 'finished'
[2025-12-17 22:28:10] 2025-12-17 21:27:33,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 22:28:10] 2025-12-17 21:27:33,382 | INFO     | time since job start (7417s) is within the limit (174528.0s)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,169 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 22:28:10] 2025-12-17 21:27:35,170 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3700.0359999999987
[2025-12-17 22:28:10] 2025-12-17 21:27:35,172 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-6931736701/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,173 | INFO     | extracted standard info from prmon json
[2025-12-17 22:28:10] 2025-12-17 21:27:35,173 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 22:28:10] 2025-12-17 21:27:35,173 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 22:28:10] 2025-12-17 21:27:35,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 22:28:10] 2025-12-17 21:27:35,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | fitting pss+swap vs Time
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | sum of square deviations: 549294020.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | sum of deviations: -19918428270.999996
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | mean x: 1766003135.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | mean y: 2439768.611570248
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | intersect: 64041015631.60499
[2025-12-17 22:28:10] 2025-12-17 21:27:35,175 | INFO     | chi2: 1.9726285626407356
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | sum of square deviations: 483971865.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | sum of deviations: -17925216000.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | mean x: 1766002982.5
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | mean y: 2444424.5517241377
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | intersect: 65411174161.26219
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | chi2: 1.9696908911666866
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | current chi2=1.9696908911666866 (change=0.1489216738358675 %)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | right removable region: 115
[2025-12-17 22:28:10] 2025-12-17 21:27:35,176 | INFO     | sum of square deviations: 483971865.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,177 | INFO     | sum of deviations: -38644404019.99999
[2025-12-17 22:28:10] 2025-12-17 21:27:35,177 | INFO     | mean x: 1766003287.5
[2025-12-17 22:28:10] 2025-12-17 21:27:35,177 | INFO     | mean y: 2482652.5172413792
[2025-12-17 22:28:10] 2025-12-17 21:27:35,177 | INFO     | intersect: 141015110613.4385
[2025-12-17 22:28:10] 2025-12-17 21:27:35,177 | INFO     | chi2: 0.2429308914157095
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | current chi2=0.2429308914157095 (change=87.68491463539894 %)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | sum of square deviations: 424045160.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | sum of deviations: -35335483359.000015
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | mean x: 1766003440.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | mean y: 2474172.7837837837
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | intersect: 147162708630.02127
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | chi2: 0.23565251973674747
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | current chi2=0.23565251973674747 (change=2.9960667564945855 %)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | left removable region: 20
[2025-12-17 22:28:10] 2025-12-17 21:27:35,178 | INFO     | sum of square deviations: 265828240.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | sum of deviations: -24684452821.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | mean x: 1766003562.0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | mean y: 2456779.2736842106
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | intersect: 163991172229.17075
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | chi2: 0.2156204098271828
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | current memory leak: -92.86 B/s (using 95 data points, chi2=0.22)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | could have reported an average CPU frequency of 3700 MHz (8 samples)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,179 | INFO     | ..............................
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . Timing measurements:
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . get job = 0 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . initial setup = 2 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . payload setup = 11 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . stage-in = 0 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . payload execution = 7371 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . stage-out = 0 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | . log creation = 0 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,180 | INFO     | ..............................
[2025-12-17 22:28:10] 2025-12-17 21:27:35,225 | INFO     | 
[2025-12-17 22:28:10] 2025-12-17 21:27:35,225 | INFO     | job summary report
[2025-12-17 22:28:10] 2025-12-17 21:27:35,225 | INFO     | --------------------------------------------------
[2025-12-17 22:28:10] 2025-12-17 21:27:35,225 | INFO     | PanDA job id: 6931736701
[2025-12-17 22:28:10] 2025-12-17 21:27:35,225 | INFO     | task id: 47898836
[2025-12-17 22:28:10] 2025-12-17 21:27:35,225 | INFO     | errors: (none)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | pilot state: finished 
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | transexitcode: 0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | exeerrorcode: 0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | exeerrordiag: 
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | exitcode: 0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | exitmsg: OK
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | cpuconsumptiontime: 28214 s
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | nevents: 400
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | neventsw: 0
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | pid: 566604
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | pgrp: 566604
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | corecount: 4
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | event service: False
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | sizes: {0: 2283860, 1: 2283974, 8: 2284264, 11: 2284292, 7386: 2311750, 7387: 2320776, 7390: 2320960, 7400: 2321154}
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | --------------------------------------------------
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | 
[2025-12-17 22:28:10] 2025-12-17 21:27:35,226 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 22:28:10] 2025-12-17 21:27:35,257 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 22:28:10] 2025-12-17 21:27:35,263 | INFO     | job 6931736701 has completed (purged errors)
[2025-12-17 22:28:10] 2025-12-17 21:27:35,263 | INFO     | overall cleanup function is called
[2025-12-17 22:28:10] 2025-12-17 21:27:36,272 | INFO     | --- collectZombieJob: --- 10, [566604]
[2025-12-17 22:28:10] 2025-12-17 21:27:36,272 | INFO     | zombie collector waiting for pid 566604
[2025-12-17 22:28:10] 2025-12-17 21:27:36,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 22:28:10] 2025-12-17 21:27:36,272 | INFO     | collected zombie processes
[2025-12-17 22:28:10] 2025-12-17 21:27:36,272 | INFO     | will attempt to kill all subprocesses of pid=566604
[2025-12-17 22:28:10] 2025-12-17 21:27:36,496 | INFO     | process IDs to be killed: [566604] (in reverse order)
[2025-12-17 22:28:10] 2025-12-17 21:27:36,588 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 22:28:10] 2025-12-17 21:27:36,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 22:28:10] 2025-12-17 21:27:36,594 | INFO     | did not find any defunct processes belonging to 566604
[2025-12-17 22:28:10] 2025-12-17 21:27:36,598 | INFO     | did not find any defunct processes belonging to 566604
[2025-12-17 22:28:10] 2025-12-17 21:27:36,599 | INFO     | ready for new job
[2025-12-17 22:28:10] 2025-12-17 21:27:36,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 22:28:10] 2025-12-17 21:27:36,601 | INFO     | ***************************************
[2025-12-17 22:28:10] 2025-12-17 21:27:36,601 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 22:28:10] 2025-12-17 21:27:36,601 | INFO     | ***************************************
[2025-12-17 22:28:10] 2025-12-17 21:27:36,601 | INFO     | 
[2025-12-17 22:28:10] 2025-12-17 21:27:36,602 | INFO     | pilot is running in a VM
[2025-12-17 22:28:10] 2025-12-17 21:27:36,602 | INFO     | architecture information:
[2025-12-17 22:28:10] 2025-12-17 21:27:36,603 | INFO     | executing command: cat /etc/os-release
[2025-12-17 22:28:10] 2025-12-17 21:27:36,622 | INFO     | cat /etc/os-release:
[2025-12-17 22:28:10] NAME="CentOS Linux"
[2025-12-17 22:28:10] VERSION="7 (Core)"
[2025-12-17 22:28:10] ID="centos"
[2025-12-17 22:28:10] ID_LIKE="rhel fedora"
[2025-12-17 22:28:10] VERSION_ID="7"
[2025-12-17 22:28:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 22:28:10] ANSI_COLOR="0;31"
[2025-12-17 22:28:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 22:28:10] HOME_URL="https://www.centos.org/"
[2025-12-17 22:28:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 22:28:10] 
[2025-12-17 22:28:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 22:28:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 22:28:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 22:28:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 22:28:10] 
[2025-12-17 22:28:10] 2025-12-17 21:27:36,623 | INFO     | ***************************************
[2025-12-17 22:28:10] 2025-12-17 21:27:37,127 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 22:28:10] 2025-12-17 21:27:37,147 | INFO     | sufficient remaining disk space (55792631808 B)
[2025-12-17 22:28:10] 2025-12-17 21:27:37,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 22:28:10] 2025-12-17 21:27:37,148 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 22:28:10] 2025-12-17 21:27:37,148 | INFO     | update_server=False
[2025-12-17 22:28:10] 2025-12-17 21:27:37,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 22:28:10] 2025-12-17 21:27:37,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 22:28:10] 2025-12-17 21:27:37,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 22:28:10] 2025-12-17 21:27:37,149 | INFO     | aborting loop
[2025-12-17 22:28:10] 2025-12-17 21:27:37,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 22:28:10] 2025-12-17 21:27:38,020 | INFO     | all job control threads have been joined
[2025-12-17 22:28:10] 2025-12-17 21:27:38,060 | INFO     | all data control threads have been joined
[2025-12-17 22:28:10] 2025-12-17 21:27:38,157 | INFO     | [job] retrieve thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,159 | INFO     | [job] queue monitor thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,160 | INFO     | [job] job monitor thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,369 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,520 | INFO     | [job] validate thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,571 | INFO     | all payload control threads have been joined
[2025-12-17 22:28:10] 2025-12-17 21:27:38,578 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,689 | INFO     | [payload] failed_post thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:38,704 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,026 | INFO     | [job] control thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,066 | INFO     | [data] control thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,263 | INFO     | [data] copytool_in thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,526 | INFO     | [payload] validate_post thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,577 | INFO     | [payload] control thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,716 | INFO     | [data] copytool_out thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:39,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 22:28:10] 2025-12-17 21:27:43,782 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:27:48,064 | INFO     | job.realtimelogging is not enabled
[2025-12-17 22:28:10] 2025-12-17 21:27:49,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 22:28:10] 2025-12-17 21:28:05,270 | INFO     | [monitor] cgroup control has ended
[2025-12-17 22:28:10] 2025-12-17 21:28:05,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126657848956736)>', '<ExcThread(monitor, started 126656748439296)>']
[2025-12-17 22:28:10] 2025-12-17 21:28:06,732 | INFO     | PID=559947 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 22:28:10] 2025-12-17 21:28:06,733 | INFO     | .. there are 3 such processes running
[2025-12-17 22:28:10] 2025-12-17 21:28:06,734 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 22:28:10] 2025-12-17 21:28:06,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 22:28:10] 2025-12-17 21:28:06,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 22:28:10] 2025-12-17 21:28:06,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 22:28:10] 2025-12-17 21:28:06,734 | INFO     | [monitor] control thread has ended
[2025-12-17 22:28:10] 2025-12-17 21:28:10,524 | INFO     | all workflow threads have been joined
[2025-12-17 22:28:10] 2025-12-17 21:28:10,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 22:28:10] 2025-12-17 21:28:10,524 | INFO     | traces error code: 0
[2025-12-17 22:28:10] 2025-12-17 21:28:10,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 22:28:10] 2025-12-17 21:28:10,641 [wrapper] ==== pilot stdout END ====
[2025-12-17 22:28:10] 2025-12-17 21:28:10,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 22:28:10] 2025-12-17 21:28:10,653 [wrapper] pilotpid: 559947
[2025-12-17 22:28:10] 2025-12-17 21:28:10,661 [wrapper] Pilot exit status: 0
[2025-12-17 22:28:10] 2025-12-17 21:28:10,686 [wrapper] pandaids: 6931736701
[2025-12-17 22:28:10] 2025-12-17 21:28:10,751 [wrapper] cleanup supervisor_pilot  649034 559948
[2025-12-17 22:28:10] 2025-12-17 21:28:10,758 [wrapper] Test setup, not cleaning
[2025-12-17 22:28:10] 2025-12-17 21:28:10,765 [wrapper] apfmon messages muted
[2025-12-17 22:28:10] 2025-12-17 21:28:10,771 [wrapper] ==== wrapper stdout END ====
[2025-12-17 22:28:10] 2025-12-17 21:28:10,777 [wrapper] ==== wrapper stderr END ====
[2025-12-17 22:28:10]  *** Error codes and diagnostics ***
[2025-12-17 22:28:10]     "exeErrorCode": 0,
[2025-12-17 22:28:10]     "exeErrorDiag": "",
[2025-12-17 22:28:10]     "pilotErrorCode": 0,
[2025-12-17 22:28:10]     "pilotErrorDiag": "",
[2025-12-17 22:28:10]  *** Listing of results directory ***
[2025-12-17 22:28:10] insgesamt 405960
[2025-12-17 22:28:10] -rwx------ 1 yeti boinc     36322 Dez 17 02:09 runpilot2-wrapper.sh
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc    579449 Dez 17 02:11 pilot3.tar.gz
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc      5112 Dez 17 02:12 queuedata.json
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc       100 Dez 17 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 22:28:10] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 20:23 run_atlas
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc       105 Dez 17 20:23 job.xml
[2025-12-17 22:28:10] -rw-r--r-- 2 yeti boinc 214607260 Dez 17 20:23 EVNT.47898833._000118.pool.root.1
[2025-12-17 22:28:10] -rw-r--r-- 2 yeti boinc     15847 Dez 17 20:23 start_atlas.sh
[2025-12-17 22:28:10] drwxrwx--x 2 yeti boinc      4096 Dez 17 20:23 shared
[2025-12-17 22:28:10] -rw-r--r-- 2 yeti boinc    592415 Dez 17 20:23 input.tar.gz
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc      6556 Dez 17 20:23 init_data.xml
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc         0 Dez 17 20:23 boinc_setup_complete
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc         0 Dez 17 20:23 boinc_lockfile
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc      2552 Dez 17 20:23 pandaJob.out
[2025-12-17 22:28:10] -rw------- 1 yeti boinc        52 Dez 17 20:23 setup.sh.local
[2025-12-17 22:28:10] -rw------- 1 yeti boinc    988136 Dez 17 20:23 agis_schedconf.cvmfs.json
[2025-12-17 22:28:10] -rw------- 1 yeti boinc   1516240 Dez 17 20:23 agis_ddmendpoints.agis.ALL.json
[2025-12-17 22:28:10] drwx------ 5 yeti boinc      4096 Dez 17 20:23 pilot3
[2025-12-17 22:28:10] -rw------- 1 yeti boinc 194427327 Dez 17 22:26 HITS.47898836._003543.pool.root.1
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc       530 Dez 17 22:27 boinc_task_state.xml
[2025-12-17 22:28:10] -rw------- 1 yeti boinc      1015 Dez 17 22:27 memory_monitor_summary.json
[2025-12-17 22:28:10] -rw------- 1 yeti boinc    301007 Dez 17 22:27 log.47898836._003543.job.log.tgz.1
[2025-12-17 22:28:10] -rw------- 1 yeti boinc      7737 Dez 17 22:27 heartbeat.json
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc      8192 Dez 17 22:28 boinc_mmap_file
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc        27 Dez 17 22:28 wrapper_checkpoint.txt
[2025-12-17 22:28:10] -rw------- 1 yeti boinc        95 Dez 17 22:28 pilot_heartbeat.json
[2025-12-17 22:28:10] -rw------- 1 yeti boinc      4970 Dez 17 22:28 pilotlog.txt
[2025-12-17 22:28:10] -rw------- 1 yeti boinc   1076361 Dez 17 22:28 log.47898836._003543.job.log.1
[2025-12-17 22:28:10] -rw------- 1 yeti boinc       357 Dez 17 22:28 output.list
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc       620 Dez 17 22:28 runtime_log
[2025-12-17 22:28:10] -rw------- 1 yeti boinc   1392640 Dez 17 22:28 result.tar.gz
[2025-12-17 22:28:10] -rw------- 1 yeti boinc       637 Dez 17 22:28 uKCODm0Dvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMDbKDmXp3hYn.diag
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc      9537 Dez 17 22:28 runtime_log.err
[2025-12-17 22:28:10] -rw-r--r-- 1 yeti boinc     20952 Dez 17 22:28 stderr.txt
[2025-12-17 22:28:10] HITS file was successfully produced:
[2025-12-17 22:28:10] -rw------- 1 yeti boinc 194427327 Dez 17 22:26 shared/HITS.pool.root.1
[2025-12-17 22:28:10]  *** Contents of shared directory: ***
[2025-12-17 22:28:10] insgesamt 401416
[2025-12-17 22:28:10] -rw-r--r-- 2 yeti boinc 214607260 Dez 17 20:23 ATLAS.root_0
[2025-12-17 22:28:10] -rw-r--r-- 2 yeti boinc     15847 Dez 17 20:23 start_atlas.sh
[2025-12-17 22:28:10] -rw-r--r-- 2 yeti boinc    592415 Dez 17 20:23 input.tar.gz
[2025-12-17 22:28:10] -rw------- 1 yeti boinc 194427327 Dez 17 22:26 HITS.pool.root.1
[2025-12-17 22:28:10] -rw------- 1 yeti boinc   1392640 Dez 17 22:28 result.tar.gz
22:28:12 (556086): run_atlas exited; CPU time 28529.854721
22:28:12 (556086): called boinc_finish(0)

</stderr_txt>
]]>

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