Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:18:08 (603409): wrapper (7.7.26015): starting
09:18:08 (603409): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 09:18:08] Arguments: --nthreads 8
[2025-12-17 09:18:08] Threads: 8
[2025-12-17 09:18:08] Checking for CVMFS
[2025-12-17 09:18:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 09:18:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 09:18:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 09:18:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 09:18:09] 2.13.3.0 12525 60264 237972 154112 3 755 40777179 40960000 25763 16776704 0 435265417 99.654 406189386 35130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 09:18:09] CVMFS is ok
[2025-12-17 09:18:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 09:18:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 09:18:09] Further information can be found at the LHC@home message board.
[2025-12-17 09:18:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 09:18:09] Checking for apptainer binary...
[2025-12-17 09:18:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 09:18:09] Running /usr/bin/apptainer --version
[2025-12-17 09:18:09] apptainer version 1.4.5-2.el9
[2025-12-17 09:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 09:18:09] c7-4-30.aglt2.org
[2025-12-17 09:18:09] apptainer works
[2025-12-17 09:18:09] Set ATHENA_PROC_NUMBER=8
[2025-12-17 09:18:09] Set ATHENA_CORE_NUMBER=8
[2025-12-17 09:18:09] Starting ATLAS job with PandaID=6931735538
[2025-12-17 09:18:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 11:07:55]  *** The last 200 lines of the pilot log: ***
[2025-12-17 11:07:55] 2025-12-17 16:07:20,189 | INFO     | time since job start (6535s) is within the limit (174528.0s)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,770 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 11:07:55] 2025-12-17 16:07:20,776 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3031.669510416666
[2025-12-17 11:07:55] 2025-12-17 16:07:20,791 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931735538/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,792 | INFO     | extracted standard info from prmon json
[2025-12-17 11:07:55] 2025-12-17 16:07:20,792 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 11:07:55] 2025-12-17 16:07:20,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 11:07:55] 2025-12-17 16:07:20,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 11:07:55] 2025-12-17 16:07:20,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 11:07:55] 2025-12-17 16:07:20,794 | INFO     | fitting pss+swap vs Time
[2025-12-17 11:07:55] 2025-12-17 16:07:20,794 | INFO     | sum of square deviations: 379859829.6261694
[2025-12-17 11:07:55] 2025-12-17 16:07:20,795 | INFO     | sum of deviations: 1103524909.6261654
[2025-12-17 11:07:55] 2025-12-17 16:07:20,795 | INFO     | mean x: 1765984373.17757
[2025-12-17 11:07:55] 2025-12-17 16:07:20,795 | INFO     | mean y: 2557982.1775700934
[2025-12-17 11:07:55] 2025-12-17 16:07:20,795 | INFO     | intersect: -5127775877.367079
[2025-12-17 11:07:55] 2025-12-17 16:07:20,795 | INFO     | chi2: 3.141650556018619
[2025-12-17 11:07:55] 2025-12-17 16:07:20,795 | INFO     | sum of square deviations: 329064671.9607834
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | sum of deviations: 16183111061.137255
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | mean x: 1765984220.6862745
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | mean y: 2601978.098039216
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | intersect: -86846948310.26549
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | chi2: 1.438120071732666
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | current chi2=1.438120071732666 (change=54.22406005729737 %)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,796 | INFO     | sum of square deviations: 283007444.6597932
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | sum of deviations: 16032651870.061853
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | mean x: 1765984068.185567
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | mean y: 2601479.3298969073
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | intersect: -100042144012.5446
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | chi2: 1.4337410267538253
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | current chi2=1.4337410267538253 (change=0.3044978694696093 %)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,797 | INFO     | right removable region: 96
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | sum of square deviations: 329053081.9607834
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | sum of deviations: -15309285717.117645
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | mean x: 1765984525.6862745
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | mean y: 2606309.5588235296
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | intersect: 82165525175.52408
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | chi2: 1.829404469649168
[2025-12-17 11:07:55] 2025-12-17 16:07:20,798 | INFO     | current chi2=1.829404469649168 (change=41.76932039292259 %)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | sum of square deviations: 282990609.2783501
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | sum of deviations: -18271649704.84536
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | mean x: 1765984678.1958764
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | mean y: 2615987.8865979384
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | intersect: 114025669637.63078
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | chi2: 1.7743476530338982
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | current chi2=1.7743476530338982 (change=3.009548600579745 %)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,799 | INFO     | left removable region: 20
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | sum of square deviations: 136107548.73684177
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | sum of deviations: -3153928504.0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | mean x: 1765984647.7368422
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | mean y: 2673705.0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | intersect: 40924645849.92915
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | chi2: 0.007158104731124382
[2025-12-17 11:07:55] 2025-12-17 16:07:20,800 | INFO     | current memory leak: -23.17 B/s (using 76 data points, chi2=0.01)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | could have reported an average CPU frequency of 3048 MHz (7 samples)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | ..............................
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . Timing measurements:
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . get job = 0 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . initial setup = 3 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . payload setup = 7 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . stage-in = 0 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . payload execution = 6484 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . stage-out = 1 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | . log creation = 0 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,801 | INFO     | ..............................
[2025-12-17 11:07:55] 2025-12-17 16:07:20,879 | INFO     | 
[2025-12-17 11:07:55] 2025-12-17 16:07:20,879 | INFO     | job summary report
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | --------------------------------------------------
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | PanDA job id: 6931735538
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | task id: 47886933
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | errors: (none)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | pilot state: finished 
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | transexitcode: 0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | exeerrorcode: 0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | exeerrordiag: 
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | exitcode: 0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | exitmsg: OK
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | cpuconsumptiontime: 38082 s
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | nevents: 400
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | neventsw: 0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | pid: 617959
[2025-12-17 11:07:55] 2025-12-17 16:07:20,880 | INFO     | pgrp: 617959
[2025-12-17 11:07:55] 2025-12-17 16:07:20,881 | INFO     | corecount: 8
[2025-12-17 11:07:55] 2025-12-17 16:07:20,881 | INFO     | event service: False
[2025-12-17 11:07:55] 2025-12-17 16:07:20,881 | INFO     | sizes: {0: 2283965, 1: 2283965, 7: 2284255, 11: 2284283, 6496: 2311532, 6497: 2311531, 6499: 2320713, 6501: 2320769, 6519: 2320963}
[2025-12-17 11:07:55] 2025-12-17 16:07:20,881 | INFO     | --------------------------------------------------
[2025-12-17 11:07:55] 2025-12-17 16:07:20,881 | INFO     | 
[2025-12-17 11:07:55] 2025-12-17 16:07:20,881 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 11:07:55] 2025-12-17 16:07:20,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 11:07:55] 2025-12-17 16:07:20,901 | INFO     | job 6931735538 has completed (purged errors)
[2025-12-17 11:07:55] 2025-12-17 16:07:20,901 | INFO     | overall cleanup function is called
[2025-12-17 11:07:55] 2025-12-17 16:07:21,909 | INFO     | --- collectZombieJob: --- 10, [617959]
[2025-12-17 11:07:55] 2025-12-17 16:07:21,909 | INFO     | zombie collector waiting for pid 617959
[2025-12-17 11:07:55] 2025-12-17 16:07:21,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 11:07:55] 2025-12-17 16:07:21,909 | INFO     | collected zombie processes
[2025-12-17 11:07:55] 2025-12-17 16:07:21,910 | INFO     | will attempt to kill all subprocesses of pid=617959
[2025-12-17 11:07:55] 2025-12-17 16:07:23,382 | INFO     | process IDs to be killed: [617959] (in reverse order)
[2025-12-17 11:07:55] 2025-12-17 16:07:23,540 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 11:07:55] 2025-12-17 16:07:23,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 11:07:55] 2025-12-17 16:07:23,560 | INFO     | did not find any defunct processes belonging to 617959
[2025-12-17 11:07:55] 2025-12-17 16:07:23,580 | INFO     | did not find any defunct processes belonging to 617959
[2025-12-17 11:07:55] 2025-12-17 16:07:23,580 | INFO     | ready for new job
[2025-12-17 11:07:55] 2025-12-17 16:07:23,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 11:07:55] 2025-12-17 16:07:23,581 | INFO     | ***************************************
[2025-12-17 11:07:55] 2025-12-17 16:07:23,582 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 11:07:55] 2025-12-17 16:07:23,582 | INFO     | ***************************************
[2025-12-17 11:07:55] 2025-12-17 16:07:23,582 | INFO     | 
[2025-12-17 11:07:55] 2025-12-17 16:07:23,587 | INFO     | architecture information:
[2025-12-17 11:07:55] 2025-12-17 16:07:23,587 | INFO     | executing command: cat /etc/os-release
[2025-12-17 11:07:55] 2025-12-17 16:07:23,602 | INFO     | cat /etc/os-release:
[2025-12-17 11:07:55] NAME="CentOS Linux"
[2025-12-17 11:07:55] VERSION="7 (Core)"
[2025-12-17 11:07:55] ID="centos"
[2025-12-17 11:07:55] ID_LIKE="rhel fedora"
[2025-12-17 11:07:55] VERSION_ID="7"
[2025-12-17 11:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 11:07:55] ANSI_COLOR="0;31"
[2025-12-17 11:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 11:07:55] HOME_URL="https://www.centos.org/"
[2025-12-17 11:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 11:07:55] 
[2025-12-17 11:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 11:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 11:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 11:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 11:07:55] 
[2025-12-17 11:07:55] 2025-12-17 16:07:23,603 | INFO     | ***************************************
[2025-12-17 11:07:55] 2025-12-17 16:07:24,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 11:07:55] 2025-12-17 16:07:24,224 | INFO     | sufficient remaining disk space (127579193344 B)
[2025-12-17 11:07:55] 2025-12-17 16:07:24,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 11:07:55] 2025-12-17 16:07:24,248 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 11:07:55] 2025-12-17 16:07:24,248 | INFO     | update_server=False
[2025-12-17 11:07:55] 2025-12-17 16:07:24,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 11:07:55] 2025-12-17 16:07:24,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 11:07:55] 2025-12-17 16:07:24,364 | INFO     | all job control threads have been joined
[2025-12-17 11:07:55] 2025-12-17 16:07:24,383 | INFO     | all payload control threads have been joined
[2025-12-17 11:07:55] 2025-12-17 16:07:24,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 11:07:55] 2025-12-17 16:07:24,742 | INFO     | aborting loop
[2025-12-17 11:07:55] 2025-12-17 16:07:25,162 | INFO     | all data control threads have been joined
[2025-12-17 11:07:55] 2025-12-17 16:07:25,254 | INFO     | [job] retrieve thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,370 | INFO     | [job] control thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,389 | INFO     | [payload] control thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,470 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,500 | INFO     | [job] validate thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,551 | INFO     | [data] copytool_in thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,748 | INFO     | [job] job monitor thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,816 | INFO     | [payload] validate_post thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:25,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 11:07:55] 2025-12-17 16:07:26,170 | INFO     | [data] control thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:26,256 | INFO     | [data] copytool_out thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:26,259 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:26,594 | INFO     | [payload] failed_post thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:26,659 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:26,911 | INFO     | [job] queue monitor thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:27,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 11:07:55] 2025-12-17 16:07:31,386 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:34,602 | INFO     | job.realtimelogging is not enabled
[2025-12-17 11:07:55] 2025-12-17 16:07:35,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 11:07:55] 2025-12-17 16:07:35,661 | INFO     | [monitor] cgroup control has ended
[2025-12-17 11:07:55] 2025-12-17 16:07:37,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932844816192)>', '<ExcThread(monitor, started 139932332955392)>']
[2025-12-17 11:07:55] 2025-12-17 16:07:42,458 | INFO     | all workflow threads have been joined
[2025-12-17 11:07:55] 2025-12-17 16:07:42,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 11:07:55] 2025-12-17 16:07:42,459 | INFO     | traces error code: 0
[2025-12-17 11:07:55] 2025-12-17 16:07:42,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 11:07:55] 2025-12-17 16:07:54,329 | INFO     | PID=609414 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 11:07:55] 2025-12-17 16:07:54,329 | INFO     | .. there are 25 such processes running
[2025-12-17 11:07:55] 2025-12-17 16:07:54,329 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 11:07:55] 2025-12-17 16:07:54,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 11:07:55] 2025-12-17 16:07:54,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 11:07:55] 2025-12-17 16:07:54,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 11:07:55] 2025-12-17 16:07:54,330 | INFO     | [monitor] control thread has ended
[2025-12-17 11:07:55] 2025-12-17 16:07:54,718 [wrapper] ==== pilot stdout END ====
[2025-12-17 11:07:55] 2025-12-17 16:07:54,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 11:07:55] 2025-12-17 16:07:54,760 [wrapper] pilotpid: 609414
[2025-12-17 11:07:55] 2025-12-17 16:07:54,791 [wrapper] Pilot exit status: 0
[2025-12-17 11:07:55] 2025-12-17 16:07:54,836 [wrapper] pandaids: 6931735538
[2025-12-17 11:07:55] 2025-12-17 16:07:54,951 [wrapper] cleanup supervisor_pilot 1018839 609415
[2025-12-17 11:07:55] 2025-12-17 16:07:55,005 [wrapper] Test setup, not cleaning
[2025-12-17 11:07:55] 2025-12-17 16:07:55,038 [wrapper] apfmon messages muted
[2025-12-17 11:07:55] 2025-12-17 16:07:55,057 [wrapper] ==== wrapper stdout END ====
[2025-12-17 11:07:55] 2025-12-17 16:07:55,060 [wrapper] ==== wrapper stderr END ====
[2025-12-17 11:07:55]  *** Error codes and diagnostics ***
[2025-12-17 11:07:55]     "exeErrorCode": 0,
[2025-12-17 11:07:55]     "exeErrorDiag": "",
[2025-12-17 11:07:55]     "pilotErrorCode": 0,
[2025-12-17 11:07:55]     "pilotErrorDiag": "",
[2025-12-17 11:07:55]  *** Listing of results directory ***
[2025-12-17 11:07:55] total 346396
[2025-12-17 11:07:55] -rwx------. 1 boincer umatlas     36322 Dec 16 20:08 runpilot2-wrapper.sh
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 20:10 queuedata.json
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 20:11 pilot3.tar.gz
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas       100 Dec 17 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 11:07:55] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 09:18 run_atlas
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas       105 Dec 17 09:18 job.xml
[2025-12-17 11:07:55] -rw-r--r--. 2 boincer umatlas 193300457 Dec 17 09:18 EVNT.47886929._000340.pool.root.1
[2025-12-17 11:07:55] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 09:18 start_atlas.sh
[2025-12-17 11:07:55] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 09:18 shared
[2025-12-17 11:07:55] -rw-r--r--. 2 boincer umatlas    592394 Dec 17 09:18 input.tar.gz
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas         0 Dec 17 09:18 boinc_lockfile
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas      2513 Dec 17 09:18 pandaJob.out
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas        57 Dec 17 09:18 setup.sh.local
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas    987423 Dec 17 09:18 agis_schedconf.cvmfs.json
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas   1516240 Dec 17 09:18 agis_ddmendpoints.agis.ALL.json
[2025-12-17 11:07:55] drwx------. 5 boincer umatlas      4096 Dec 17 09:18 pilot3
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas      6947 Dec 17 11:04 init_data.xml
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas 154955932 Dec 17 11:05 HITS.47886933._008328.pool.root.1
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas       530 Dec 17 11:05 boinc_task_state.xml
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas      1033 Dec 17 11:06 memory_monitor_summary.json
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas    351335 Dec 17 11:07 log.47886933._008328.job.log.tgz.1
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas      7775 Dec 17 11:07 heartbeat.json
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas        95 Dec 17 11:07 pilot_heartbeat.json
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 11:07 boinc_mmap_file
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas        27 Dec 17 11:07 wrapper_checkpoint.txt
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas       822 Dec 17 11:07 pilotlog.txt
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas    919128 Dec 17 11:07 log.47886933._008328.job.log.1
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas       357 Dec 17 11:07 output.list
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas       620 Dec 17 11:07 runtime_log
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas   1290240 Dec 17 11:07 result.tar.gz
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas      9337 Dec 17 11:07 runtime_log.err
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas       650 Dec 17 11:07 ITKKDmCDvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCfWKDm27wjxm.diag
[2025-12-17 11:07:55] -rw-r--r--. 1 boincer umatlas     21137 Dec 17 11:07 stderr.txt
[2025-12-17 11:07:55] HITS file was successfully produced:
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas 154955932 Dec 17 11:05 shared/HITS.pool.root.1
[2025-12-17 11:07:55]  *** Contents of shared directory: ***
[2025-12-17 11:07:55] total 341960
[2025-12-17 11:07:55] -rw-r--r--. 2 boincer umatlas 193300457 Dec 17 09:18 ATLAS.root_0
[2025-12-17 11:07:55] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 09:18 start_atlas.sh
[2025-12-17 11:07:55] -rw-r--r--. 2 boincer umatlas    592394 Dec 17 09:18 input.tar.gz
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas 154955932 Dec 17 11:05 HITS.pool.root.1
[2025-12-17 11:07:55] -rw-------. 1 boincer umatlas   1290240 Dec 17 11:07 result.tar.gz
11:07:56 (603409): run_atlas exited; CPU time 38328.172776
11:07:56 (603409): called boinc_finish(0)

</stderr_txt>
]]>

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