Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:59:31 (3084145): wrapper (7.7.26015): starting
07:59:31 (3084145): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 07:59:31] Arguments: --nthreads 8
[2025-12-17 07:59:31] Threads: 8
[2025-12-17 07:59:31] Checking for CVMFS
[2025-12-17 07:59:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 07:59:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 07:59:32] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 07:59:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 07:59:33] 2.13.3.0 14106 60272 191724 154112 3 287 32950915 40959210 39852 16776704 0 817397483 99.724 594173805 47088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 07:59:33] CVMFS is ok
[2025-12-17 07:59:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 07:59:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 07:59:33] Further information can be found at the LHC@home message board.
[2025-12-17 07:59:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 07:59:33] Checking for apptainer binary...
[2025-12-17 07:59:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 07:59:33] Running /usr/bin/apptainer --version
[2025-12-17 07:59:33] apptainer version 1.4.5-2.el9
[2025-12-17 07:59:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 07:59:33] c8-7-5.aglt2.org
[2025-12-17 07:59:33] apptainer works
[2025-12-17 07:59:33] Set ATHENA_PROC_NUMBER=8
[2025-12-17 07:59:33] Set ATHENA_CORE_NUMBER=8
[2025-12-17 07:59:33] Starting ATLAS job with PandaID=6931736691
[2025-12-17 07:59:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 10:12:49]  *** The last 200 lines of the pilot log: ***
[2025-12-17 10:12:49] 2025-12-17 15:11:43,442 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9941328125024
[2025-12-17 10:12:49] 2025-12-17 15:11:43,583 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6931736691/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,583 | INFO     | extracted standard info from prmon json
[2025-12-17 10:12:49] 2025-12-17 15:11:43,583 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 10:12:49] 2025-12-17 15:11:43,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 10:12:49] 2025-12-17 15:11:43,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 10:12:49] 2025-12-17 15:11:43,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 10:12:49] 2025-12-17 15:11:43,585 | INFO     | fitting pss+swap vs Time
[2025-12-17 10:12:49] 2025-12-17 15:11:43,592 | INFO     | sum of square deviations: 635201927.5275587
[2025-12-17 10:12:49] 2025-12-17 15:11:43,593 | INFO     | sum of deviations: 5107695259.125988
[2025-12-17 10:12:49] 2025-12-17 15:11:43,593 | INFO     | mean x: 1765980390.1653543
[2025-12-17 10:12:49] 2025-12-17 15:11:43,593 | INFO     | mean y: 2495816.755905512
[2025-12-17 10:12:49] 2025-12-17 15:11:43,593 | INFO     | intersect: -14197854143.87248
[2025-12-17 10:12:49] 2025-12-17 15:11:43,593 | INFO     | chi2: 3.439187101399271
[2025-12-17 10:12:49] 2025-12-17 15:11:43,593 | INFO     | sum of square deviations: 563096907.2213093
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | sum of deviations: 21955691114.098362
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | mean x: 1765980237.6639345
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | mean y: 2530558.295081967
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | intersect: -68854740924.66231
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | chi2: 1.7786312734865601
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | current chi2=1.7786312734865601 (change=48.28338147805613 %)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,598 | INFO     | sum of square deviations: 496644079.811965
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | sum of deviations: 21018943346.87179
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | mean x: 1765980085.1367521
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | mean y: 2528413.8205128205
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | intersect: -74737183323.5003
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | chi2: 1.7812053423393217
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | current chi2=1.7812053423393217 (change=-0.1447218932407363 %)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | right removable region: 116
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | sum of square deviations: 563091844.8852468
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | sum of deviations: -17484871195.75409
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | mean x: 1765980542.672131
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | mean y: 2542856.131147541
[2025-12-17 10:12:49] 2025-12-17 15:11:43,599 | INFO     | intersect: 54838965374.59753
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | chi2: 1.7402021990668164
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | current chi2=1.7402021990668164 (change=49.40076978194074 %)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | sum of square deviations: 496656287.2307682
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | sum of deviations: -17010598247.897434
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | mean x: 1765980695.1794872
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | mean y: 2541748.376068376
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | intersect: 60487808705.80976
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | chi2: 1.7432307706250154
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | current chi2=1.7432307706250154 (change=-0.17403561263300862 %)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | left removable region: 20
[2025-12-17 10:12:49] 2025-12-17 15:11:43,600 | INFO     | sum of square deviations: 274340437.3333326
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | sum of deviations: -257299341.33333334
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | mean x: 1765980664.6666667
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | mean y: 2580668.8645833335
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | intersect: 1658864613.8888528
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | chi2: 0.0003603438406826433
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | current memory leak: -0.94 B/s (using 96 data points, chi2=0.00)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,601 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,605 | INFO     | ..............................
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . Timing measurements:
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . get job = 0 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . initial setup = 5 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . payload setup = 33 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . stage-in = 0 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . payload execution = 7745 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . stage-out = 1 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | . log creation = 0 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,606 | INFO     | ..............................
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | 
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | job summary report
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | --------------------------------------------------
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | PanDA job id: 6931736691
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | task id: 47898836
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | errors: (none)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | pilot state: finished 
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | transexitcode: 0
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | exeerrorcode: 0
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | exeerrordiag: 
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | exitcode: 0
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | exitmsg: OK
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | cpuconsumptiontime: 31602 s
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | nevents: 400
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | neventsw: 0
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | pid: 3126383
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | pgrp: 3126383
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | corecount: 8
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | event service: False
[2025-12-17 10:12:49] 2025-12-17 15:11:43,724 | INFO     | sizes: {0: 2283132, 1: 2283988, 2: 2283988, 13: 2284016, 23: 2284072, 24: 2284362, 34: 2284518, 7783: 2312109, 7784: 2312108, 7786: 2321218, 7820: 2321356}
[2025-12-17 10:12:49] 2025-12-17 15:11:43,725 | INFO     | --------------------------------------------------
[2025-12-17 10:12:49] 2025-12-17 15:11:43,725 | INFO     | 
[2025-12-17 10:12:49] 2025-12-17 15:11:43,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | job 6931736691 has completed (purged errors)
[2025-12-17 10:12:49] 2025-12-17 15:11:43,900 | INFO     | overall cleanup function is called
[2025-12-17 10:12:49] 2025-12-17 15:11:44,913 | INFO     | --- collectZombieJob: --- 10, [3126383]
[2025-12-17 10:12:49] 2025-12-17 15:11:44,913 | INFO     | zombie collector waiting for pid 3126383
[2025-12-17 10:12:49] 2025-12-17 15:11:44,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 10:12:49] 2025-12-17 15:11:44,913 | INFO     | collected zombie processes
[2025-12-17 10:12:49] 2025-12-17 15:11:44,913 | INFO     | will attempt to kill all subprocesses of pid=3126383
[2025-12-17 10:12:49] 2025-12-17 15:11:46,114 | INFO     | PID=3093877 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 10:12:49] 2025-12-17 15:11:46,142 | INFO     | .. there are 41 such processes running
[2025-12-17 10:12:49] 2025-12-17 15:11:46,206 | INFO     | process IDs to be killed: [3126383] (in reverse order)
[2025-12-17 10:12:49] 2025-12-17 15:11:47,299 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 10:12:49] 2025-12-17 15:11:47,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 10:12:49] 2025-12-17 15:11:47,324 | INFO     | did not find any defunct processes belonging to 3126383
[2025-12-17 10:12:49] 2025-12-17 15:11:47,350 | INFO     | did not find any defunct processes belonging to 3126383
[2025-12-17 10:12:49] 2025-12-17 15:11:47,350 | INFO     | ready for new job
[2025-12-17 10:12:49] 2025-12-17 15:11:47,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 10:12:49] 2025-12-17 15:11:47,372 | INFO     | ***************************************
[2025-12-17 10:12:49] 2025-12-17 15:11:47,373 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 10:12:49] 2025-12-17 15:11:47,373 | INFO     | ***************************************
[2025-12-17 10:12:49] 2025-12-17 15:11:47,373 | INFO     | 
[2025-12-17 10:12:49] 2025-12-17 15:11:47,391 | INFO     | architecture information:
[2025-12-17 10:12:49] 2025-12-17 15:11:47,404 | INFO     | executing command: cat /etc/os-release
[2025-12-17 10:12:49] 2025-12-17 15:11:47,438 | INFO     | cat /etc/os-release:
[2025-12-17 10:12:49] NAME="CentOS Linux"
[2025-12-17 10:12:49] VERSION="7 (Core)"
[2025-12-17 10:12:49] ID="centos"
[2025-12-17 10:12:49] ID_LIKE="rhel fedora"
[2025-12-17 10:12:49] VERSION_ID="7"
[2025-12-17 10:12:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 10:12:49] ANSI_COLOR="0;31"
[2025-12-17 10:12:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 10:12:49] HOME_URL="https://www.centos.org/"
[2025-12-17 10:12:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 10:12:49] 
[2025-12-17 10:12:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 10:12:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 10:12:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 10:12:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 10:12:49] 
[2025-12-17 10:12:49] 2025-12-17 15:11:47,438 | INFO     | ***************************************
[2025-12-17 10:12:49] 2025-12-17 15:11:47,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 10:12:49] 2025-12-17 15:11:48,206 | INFO     | sufficient remaining disk space (170147184640 B)
[2025-12-17 10:12:49] 2025-12-17 15:11:48,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 10:12:49] 2025-12-17 15:11:48,207 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 10:12:49] 2025-12-17 15:11:48,207 | INFO     | update_server=False
[2025-12-17 10:12:49] 2025-12-17 15:11:48,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 10:12:49] 2025-12-17 15:11:48,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:12:49] 2025-12-17 15:11:48,208 | INFO     | aborting loop
[2025-12-17 10:12:49] 2025-12-17 15:11:48,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 10:12:49] 2025-12-17 15:11:48,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 10:12:49] 2025-12-17 15:11:48,485 | INFO     | all payload control threads have been joined
[2025-12-17 10:12:49] 2025-12-17 15:11:48,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:12:49] 2025-12-17 15:11:49,085 | INFO     | all data control threads have been joined
[2025-12-17 10:12:49] 2025-12-17 15:11:49,212 | INFO     | [job] retrieve thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,235 | INFO     | [job] job monitor thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,244 | INFO     | [payload] failed_post thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,244 | INFO     | [payload] validate_post thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,491 | INFO     | [payload] control thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,714 | INFO     | [data] copytool_in thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,748 | INFO     | [job] queue monitor thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:49,837 | INFO     | all job control threads have been joined
[2025-12-17 10:12:49] 2025-12-17 15:11:50,061 | INFO     | [job] validate thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:50,091 | INFO     | [data] control thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:50,182 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:50,218 | INFO     | [data] copytool_out thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:50,445 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:50,566 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:50,843 | INFO     | [job] control thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:52,220 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:11:59,191 | INFO     | job.realtimelogging is not enabled
[2025-12-17 10:12:49] 2025-12-17 15:12:00,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 10:12:49] 2025-12-17 15:12:19,893 | INFO     | PID=3093877 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 10:12:49] 2025-12-17 15:12:19,893 | INFO     | .. there are 41 such processes running
[2025-12-17 10:12:49] 2025-12-17 15:12:19,893 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 10:12:49] 2025-12-17 15:12:19,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 10:12:49] 2025-12-17 15:12:19,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 10:12:49] 2025-12-17 15:12:41,394 | INFO     | [monitor] cgroup control has ended
[2025-12-17 10:12:49] 2025-12-17 15:12:42,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350486759232)>', '<ExcThread(monitor, started 140350213560064)>']
[2025-12-17 10:12:49] 2025-12-17 15:12:43,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 10:12:49] 2025-12-17 15:12:43,083 | INFO     | [monitor] control thread has ended
[2025-12-17 10:12:49] 2025-12-17 15:12:47,514 | INFO     | all workflow threads have been joined
[2025-12-17 10:12:49] 2025-12-17 15:12:47,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 10:12:49] 2025-12-17 15:12:47,514 | INFO     | traces error code: 0
[2025-12-17 10:12:49] 2025-12-17 15:12:47,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 10:12:49] 2025-12-17 15:12:47,911 [wrapper] ==== pilot stdout END ====
[2025-12-17 10:12:49] 2025-12-17 15:12:47,924 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 10:12:49] 2025-12-17 15:12:47,948 [wrapper] pilotpid: 3093877
[2025-12-17 10:12:49] 2025-12-17 15:12:47,955 [wrapper] Pilot exit status: 0
[2025-12-17 10:12:49] 2025-12-17 15:12:48,077 [wrapper] pandaids: 6931736691
[2025-12-17 10:12:49] 2025-12-17 15:12:48,459 [wrapper] cleanup supervisor_pilot 3997347 3093878
[2025-12-17 10:12:49] 2025-12-17 15:12:48,491 [wrapper] Test setup, not cleaning
[2025-12-17 10:12:49] 2025-12-17 15:12:48,538 [wrapper] apfmon messages muted
[2025-12-17 10:12:49] 2025-12-17 15:12:48,571 [wrapper] ==== wrapper stdout END ====
[2025-12-17 10:12:49] 2025-12-17 15:12:48,612 [wrapper] ==== wrapper stderr END ====
[2025-12-17 10:12:49]  *** Error codes and diagnostics ***
[2025-12-17 10:12:49]     "exeErrorCode": 0,
[2025-12-17 10:12:49]     "exeErrorDiag": "",
[2025-12-17 10:12:49]     "pilotErrorCode": 0,
[2025-12-17 10:12:49]     "pilotErrorDiag": "",
[2025-12-17 10:12:49]  *** Listing of results directory ***
[2025-12-17 10:12:49] total 407956
[2025-12-17 10:12:49] -rwx------. 1 boincer umatlas     36322 Dec 16 20:09 runpilot2-wrapper.sh
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 20:11 pilot3.tar.gz
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 20:12 queuedata.json
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas       100 Dec 17 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 10:12:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 07:59 run_atlas
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas       105 Dec 17 07:59 job.xml
[2025-12-17 10:12:49] -rw-r--r--. 2 boincer umatlas 214004478 Dec 17 07:59 EVNT.47898833._000101.pool.root.1
[2025-12-17 10:12:49] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 07:59 shared
[2025-12-17 10:12:49] -rw-r--r--. 2 boincer umatlas    592412 Dec 17 07:59 input.tar.gz
[2025-12-17 10:12:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 07:59 start_atlas.sh
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas         0 Dec 17 07:59 boinc_lockfile
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas      2552 Dec 17 07:59 pandaJob.out
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas        57 Dec 17 07:59 setup.sh.local
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas    987423 Dec 17 08:00 agis_schedconf.cvmfs.json
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas   1516240 Dec 17 08:00 agis_ddmendpoints.agis.ALL.json
[2025-12-17 10:12:49] drwx------. 5 boincer umatlas      4096 Dec 17 08:00 pilot3
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas 197043504 Dec 17 10:08 HITS.47898836._003533.pool.root.1
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas       530 Dec 17 10:09 boinc_task_state.xml
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas      1036 Dec 17 10:11 memory_monitor_summary.json
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas    375271 Dec 17 10:11 log.47898836._003533.job.log.tgz.1
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas      7771 Dec 17 10:11 heartbeat.json
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas      7172 Dec 17 10:11 init_data.xml
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas        95 Dec 17 10:12 pilot_heartbeat.json
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 10:12 boinc_mmap_file
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas      4897 Dec 17 10:12 pilotlog.txt
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas        27 Dec 17 10:12 wrapper_checkpoint.txt
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas   1013779 Dec 17 10:12 log.47898836._003533.job.log.1
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas       357 Dec 17 10:12 output.list
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas       620 Dec 17 10:12 runtime_log
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas   1413120 Dec 17 10:12 result.tar.gz
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas      9332 Dec 17 10:12 runtime_log.err
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas       650 Dec 17 10:12 MM6NDm0Dvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHDbKDmXcBPIm.diag
[2025-12-17 10:12:49] -rw-r--r--. 1 boincer umatlas     21298 Dec 17 10:12 stderr.txt
[2025-12-17 10:12:49] HITS file was successfully produced:
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas 197043504 Dec 17 10:08 shared/HITS.pool.root.1
[2025-12-17 10:12:49]  *** Contents of shared directory: ***
[2025-12-17 10:12:49] total 403400
[2025-12-17 10:12:49] -rw-r--r--. 2 boincer umatlas 214004478 Dec 17 07:59 ATLAS.root_0
[2025-12-17 10:12:49] -rw-r--r--. 2 boincer umatlas    592412 Dec 17 07:59 input.tar.gz
[2025-12-17 10:12:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 07:59 start_atlas.sh
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas 197043504 Dec 17 10:08 HITS.pool.root.1
[2025-12-17 10:12:49] -rw-------. 1 boincer umatlas   1413120 Dec 17 10:12 result.tar.gz
10:13:11 (3084145): run_atlas exited; CPU time 31832.113542
10:13:11 (3084145): called boinc_finish(0)

</stderr_txt>
]]>

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