Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:39:08 (74362): wrapper (7.7.26015): starting
04:39:08 (74362): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 04:39:08] Arguments: --nthreads 12
[2025-12-17 04:39:08] Threads: 12
[2025-12-17 04:39:08] Checking for CVMFS
[2025-12-17 04:39:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 04:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 04:39:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 04:39:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 04:39:12] 2.11.5.0 3857663 23457 342492 154111 3 514 39244080 45568000 15397 130560 0 99920052 99.805 61995041 20997 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-17 04:39:12] CVMFS is ok
[2025-12-17 04:39:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 04:39:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 04:39:12] Further information can be found at the LHC@home message board.
[2025-12-17 04:39:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 04:39:12] Checking for apptainer binary...
[2025-12-17 04:39:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 04:39:12] Running /usr/bin/apptainer --version
[2025-12-17 04:39:12] apptainer version 1.4.1-1.el9
[2025-12-17 04:39:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 04:39:14] wns0075.triumf.lcg
[2025-12-17 04:39:14] apptainer works
[2025-12-17 04:39:14] Set ATHENA_PROC_NUMBER=12
[2025-12-17 04:39:14] Set ATHENA_CORE_NUMBER=12
[2025-12-17 04:39:14] Starting ATLAS job with PandaID=6930228786
[2025-12-17 04:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 04:47:22]  *** The last 200 lines of the pilot log: ***
[2025-12-17 04:47:22] 2025-12-17 12:46:12,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 04:47:22] 2025-12-17 12:46:12,805 | WARNING  | wrong length of table data, x=[1765975376.0], y=[1726.0] (must be same and length>=4)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | could have reported an average CPU frequency of 1348 MHz (4 samples)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | ..............................
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . Timing measurements:
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . get job = 1 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . initial setup = 5 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . payload setup = 45 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . stage-in = 0 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . payload execution = 73 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . stage-out = 2 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . log creation = 0 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | ..............................
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930228786/pilotlog.txt
[2025-12-17 04:47:22] 2025-12-17 12:46:12,908 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-17 04:47:22] - Log from pilotlog.txt -
[2025-12-17 04:47:22] 2025-12-17 12:46:12,781 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930228786/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,782 | INFO     | extracted standard info from prmon json
[2025-12-17 04:47:22] 2025-12-17 12:46:12,783 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 04:47:22] 2025-12-17 12:46:12,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 04:47:22] 2025-12-17 12:46:12,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 04:47:22] 2025-12-17 12:46:12,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 04:47:22] 2025-12-17 12:46:12,805 | WARNING  | wrong length of table data, x=[1765975376.0], y=[1726.0] (must be same and length>=4)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | could have reported an average CPU frequency of 1348 MHz (4 samples)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | ..............................
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . Timing measurements:
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . get job = 1 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . initial setup = 5 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . payload setup = 45 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . stage-in = 0 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . payload execution = 73 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . stage-out = 2 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . log creation = 0 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | ..............................
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930228786/pilotlog.txt
[2025-12-17 04:47:22] 2025-12-17 12:46:12,909 | WARNING  | 
[2025-12-17 04:47:22] [begin log extracts]
[2025-12-17 04:47:22] - Log from pilotlog.txt -
[2025-12-17 04:47:22] 2025-12-17 12:46:12,781 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930228786/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,782 | INFO     | extracted standard info from prmon json
[2025-12-17 04:47:22] 2025-12-17 12:46:12,783 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 04:47:22] 2025-12-17 12:46:12,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 04:47:22] 2025-12-17 12:46:12,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 04:47:22] 2025-12-17 12:46:12,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 04:47:22] 2025-12-17 12:46:12,805 | WARNING  | wrong length of table data, x=[1765975376.0], y=[1726.0] (must be same and length>=4)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | could have reported an average CPU frequency of 1348 MHz (4 samples)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | ..............................
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . Timing measurements:
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . get job = 1 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . initial setup = 5 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . payload setup = 45 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,806 | INFO     | . stage-in = 0 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . payload execution = 73 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . stage-out = 2 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | . log creation = 0 s
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | ..............................
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 04:47:22] 2025-12-17 12:46:12,807 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930228786/pilotlog.txt
[2025-12-17 04:47:22] [end log extracts]
[2025-12-17 04:47:22] 2025-12-17 12:46:12,909 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-17 04:47:22] 2025-12-17 12:46:12,910 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-17 04:47:22] 2025-12-17 12:46:13,157 | INFO     | 
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | job summary report
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | --------------------------------------------------
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | PanDA job id: 6930228786
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | task id: 47905907
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-17 04:43:21,352 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | pilot state: failed 
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | transexitcode: 65
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | exeerrorcode: 65
[2025-12-17 04:47:22] 2025-12-17 12:46:13,158 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | exitcode: 65
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | cpuconsumptiontime: 30 s
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | nevents: 0
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | neventsw: 0
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | pid: 85489
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | pgrp: 85489
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | corecount: 12
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | event service: False
[2025-12-17 04:47:22] 2025-12-17 12:46:13,159 | INFO     | sizes: {0: 2283678, 1: 2283762, 2: 2283790, 4: 2283961, 15: 2283989, 27: 2284017, 32: 2284435, 37: 2284463, 124: 2307620, 125: 2307596, 128: 2311916, 132: 2312252,
[2025-12-17 04:47:22] 2025-12-17 12:46:13,160 | INFO     | --------------------------------------------------
[2025-12-17 04:47:22] 2025-12-17 12:46:13,160 | INFO     | 
[2025-12-17 04:47:22] 2025-12-17 12:46:13,160 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-17 04:47:22] 2025-12-17 12:46:13,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,228 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 04:47:22] 2025-12-17 12:46:13,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 04:47:22] 2025-12-17 12:46:13,230 | INFO     | job 6930228786 has completed (purged errors)
[2025-12-17 04:47:22] 2025-12-17 12:46:13,231 | INFO     | overall cleanup function is called
[2025-12-17 04:47:22] 2025-12-17 12:46:14,238 | INFO     | --- collectZombieJob: --- 10, [85489]
[2025-12-17 04:47:22] 2025-12-17 12:46:14,238 | INFO     | zombie collector waiting for pid 85489
[2025-12-17 04:47:22] 2025-12-17 12:46:14,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 04:47:22] 2025-12-17 12:46:14,239 | INFO     | collected zombie processes
[2025-12-17 04:47:22] 2025-12-17 12:46:14,239 | INFO     | will attempt to kill all subprocesses of pid=85489
[2025-12-17 04:47:22] 2025-12-17 12:46:15,087 | INFO     | process IDs to be killed: [85489] (in reverse order)
[2025-12-17 04:47:22] 2025-12-17 12:46:15,223 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 04:47:22] 2025-12-17 12:46:15,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 04:47:22] 2025-12-17 12:46:15,243 | INFO     | did not find any defunct processes belonging to 85489
[2025-12-17 04:47:22] 2025-12-17 12:46:15,258 | INFO     | did not find any defunct processes belonging to 85489
[2025-12-17 04:47:22] 2025-12-17 12:46:15,259 | INFO     | ready for new job
[2025-12-17 04:47:22] 2025-12-17 12:46:15,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 04:47:22] 2025-12-17 12:46:15,261 | INFO     | ***************************************
[2025-12-17 04:47:22] 2025-12-17 12:46:15,261 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 04:47:22] 2025-12-17 12:46:15,261 | INFO     | ***************************************
[2025-12-17 04:47:22] 2025-12-17 12:46:15,262 | INFO     | 
[2025-12-17 04:47:22] 2025-12-17 12:46:15,266 | INFO     | architecture information:
[2025-12-17 04:47:22] 2025-12-17 12:46:15,267 | INFO     | executing command: cat /etc/os-release
[2025-12-17 04:47:22] 2025-12-17 12:46:15,293 | INFO     | cat /etc/os-release:
[2025-12-17 04:47:22] NAME="CentOS Linux"
[2025-12-17 04:47:22] VERSION="7 (Core)"
[2025-12-17 04:47:22] ID="centos"
[2025-12-17 04:47:22] ID_LIKE="rhel fedora"
[2025-12-17 04:47:22] VERSION_ID="7"
[2025-12-17 04:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 04:47:22] ANSI_COLOR="0;31"
[2025-12-17 04:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 04:47:22] HOME_URL="https://www.centos.org/"
[2025-12-17 04:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 04:47:22] 
[2025-12-17 04:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 04:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 04:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 04:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 04:47:22] 
[2025-12-17 04:47:22] 2025-12-17 12:46:15,294 | INFO     | ***************************************
[2025-12-17 04:47:22] 2025-12-17 12:46:15,797 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-17 04:47:22] 2025-12-17 12:46:15,828 | INFO     | sufficient remaining disk space (1883129249792 B)
[2025-12-17 04:47:22] 2025-12-17 12:46:15,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 04:47:22] 2025-12-17 12:46:15,829 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 04:47:22] 2025-12-17 12:46:15,829 | INFO     | update_server=False
[2025-12-17 04:47:22] 2025-12-17 12:46:15,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 04:47:22] 2025-12-17 12:46:15,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 04:47:22] 2025-12-17 12:46:15,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 04:47:22] 2025-12-17 12:46:16,247 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 04:47:22] 2025-12-17 12:46:16,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 04:47:22] 2025-12-17 12:46:16,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 04:47:22] 2025-12-17 12:46:16,248 | INFO     | will abort loop
[2025-12-17 04:47:22] 2025-12-17 12:46:16,730 | INFO     | all data control threads have been joined
[2025-12-17 04:47:22] 2025-12-17 12:46:16,754 | INFO     | all payload control threads have been joined
[2025-12-17 04:47:22] 2025-12-17 12:46:16,835 | INFO     | [job] retrieve thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:16,956 | INFO     | all job control threads have been joined
[2025-12-17 04:47:22] 2025-12-17 12:46:17,193 | INFO     | [payload] failed_post thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,253 | INFO     | [job] job monitor thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,435 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,464 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,507 | INFO     | [payload] validate_post thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,736 | INFO     | [data] control thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,760 | INFO     | [payload] control thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,836 | INFO     | [data] copytool_out thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:17,962 | INFO     | [job] control thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:18,063 | INFO     | [job] validate thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:18,090 | INFO     | [data] copytool_in thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:18,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 04:47:22] 2025-12-17 12:46:18,303 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:19,178 | INFO     | [job] queue monitor thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:19,838 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 04:47:22] 2025-12-17 12:46:45,898 | INFO     | PID=78250 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 04:47:22] 2025-12-17 12:46:45,898 | INFO     | .. there are 35 such processes running
[2025-12-17 04:47:22] 2025-12-17 12:46:45,898 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 04:47:22] 2025-12-17 12:46:45,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 04:47:22] 2025-12-17 12:46:45,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 04:47:22] 2025-12-17 12:47:13,173 | INFO     | [monitor] cgroup control has ended
[2025-12-17 04:47:22] 2025-12-17 12:47:14,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921550985024)>', '<ExcThread(monitor, started 139921016735488)>']
[2025-12-17 04:47:22] 2025-12-17 12:47:15,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 04:47:22] 2025-12-17 12:47:15,120 | INFO     | [monitor] control thread has ended
[2025-12-17 04:47:22] 2025-12-17 12:47:19,648 | INFO     | all workflow threads have been joined
[2025-12-17 04:47:22] 2025-12-17 12:47:19,648 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 04:47:22] 2025-12-17 12:47:19,649 | INFO     | traces error code: 0
[2025-12-17 04:47:22] 2025-12-17 12:47:19,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 04:47:22] 2025-12-17 12:47:20,190 [wrapper] ==== pilot stdout END ====
[2025-12-17 04:47:22] 2025-12-17 12:47:20,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 04:47:22] 2025-12-17 12:47:20,243 [wrapper] pilotpid: 78250
[2025-12-17 04:47:22] 2025-12-17 12:47:20,263 [wrapper] Pilot exit status: 0
[2025-12-17 04:47:22] 2025-12-17 12:47:20,426 [wrapper] pandaids: 6930228786
[2025-12-17 04:47:22] 2025-12-17 12:47:21,208 [wrapper] cleanup supervisor_pilot   78256 78251
[2025-12-17 04:47:22] 2025-12-17 12:47:21,246 [wrapper] Test setup, not cleaning
[2025-12-17 04:47:22] 2025-12-17 12:47:21,285 [wrapper] apfmon messages muted
[2025-12-17 04:47:22] 2025-12-17 12:47:21,316 [wrapper] ==== wrapper stdout END ====
[2025-12-17 04:47:22] 2025-12-17 12:47:21,350 [wrapper] ==== wrapper stderr END ====
[2025-12-17 04:47:22]  *** Error codes and diagnostics ***
[2025-12-17 04:47:22]     "exeErrorCode": 65,
[2025-12-17 04:47:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 04:47:22]     "pilotErrorCode": 1305,
[2025-12-17 04:47:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 04:47:22]  *** Listing of results directory ***
[2025-12-17 04:47:22] total 201848
[2025-12-17 04:47:22] -rwx------. 1 boinc boinc     36322 Dec 15 18:07 runpilot2-wrapper.sh
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc      5112 Dec 15 18:09 queuedata.json
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc    579449 Dec 15 18:09 pilot3.tar.gz
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc       100 Dec 17 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 04:47:22] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 04:39 run_atlas
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc       105 Dec 17 04:39 job.xml
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc      6595 Dec 17 04:39 init_data.xml
[2025-12-17 04:47:22] -rw-r--r--. 2 boinc boinc 202533966 Dec 17 04:39 EVNT.47905905._000033.pool.root.1
[2025-12-17 04:47:22] -rw-r--r--. 2 boinc boinc     15847 Dec 17 04:39 start_atlas.sh
[2025-12-17 04:47:22] drwxrwx--x. 2 boinc boinc      4096 Dec 17 04:39 shared
[2025-12-17 04:47:22] -rw-r--r--. 2 boinc boinc    592380 Dec 17 04:39 input.tar.gz
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc         0 Dec 17 04:39 boinc_lockfile
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc      2475 Dec 17 04:39 pandaJob.out
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc    987423 Dec 17 04:40 agis_schedconf.cvmfs.json
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc   1516240 Dec 17 04:40 agis_ddmendpoints.agis.ALL.json
[2025-12-17 04:47:22] drwx------. 5 boinc boinc      4096 Dec 17 04:40 pilot3
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc       525 Dec 17 04:43 boinc_task_state.xml
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc       950 Dec 17 04:43 memory_monitor_summary.json
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc     22568 Dec 17 04:43 log.47905907._000798.job.log.tgz.1
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc      8379 Dec 17 04:46 heartbeat.json
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc        95 Dec 17 04:46 pilot_heartbeat.json
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc      8192 Dec 17 04:47 boinc_mmap_file
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc        23 Dec 17 04:47 wrapper_checkpoint.txt
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc      5007 Dec 17 04:47 pilotlog.txt
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc    101107 Dec 17 04:47 log.47905907._000798.job.log.1
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc       188 Dec 17 04:47 output.list
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc       620 Dec 17 04:47 runtime_log
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc    143360 Dec 17 04:47 result.tar.gz
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc      8636 Dec 17 04:47 runtime_log.err
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc       645 Dec 17 04:47 nHtKDmWeZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPBZKDmWuAxLm.diag
[2025-12-17 04:47:22] -rw-r--r--. 1 boinc boinc     21850 Dec 17 04:47 stderr.txt
[2025-12-17 04:47:22] No HITS result produced
[2025-12-17 04:47:22]  *** Contents of shared directory: ***
[2025-12-17 04:47:22] total 198528
[2025-12-17 04:47:22] -rw-r--r--. 2 boinc boinc 202533966 Dec 17 04:39 ATLAS.root_0
[2025-12-17 04:47:22] -rw-r--r--. 2 boinc boinc     15847 Dec 17 04:39 start_atlas.sh
[2025-12-17 04:47:22] -rw-r--r--. 2 boinc boinc    592380 Dec 17 04:39 input.tar.gz
[2025-12-17 04:47:22] -rw-------. 1 boinc boinc    143360 Dec 17 04:47 result.tar.gz
04:47:23 (74362): run_atlas exited; CPU time 47.546575
04:47:23 (74362): called boinc_finish(0)

</stderr_txt>
]]>

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