Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:40 (3236694): wrapper (7.7.26015): starting
08:12:40 (3236694): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 08:12:40] Arguments: --nthreads 8
[2025-12-17 08:12:40] Threads: 8
[2025-12-17 08:12:40] Checking for CVMFS
[2025-12-17 08:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 08:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 08:12:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 08:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 08:12:41] 2.13.3.0 14106 60285 214980 154112 1 768 33932788 40960001 40826 16776704 0 817703299 99.724 594412609 47087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 08:12:41] CVMFS is ok
[2025-12-17 08:12:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 08:12:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 08:12:41] Further information can be found at the LHC@home message board.
[2025-12-17 08:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 08:12:41] Checking for apptainer binary...
[2025-12-17 08:12:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 08:12:41] Running /usr/bin/apptainer --version
[2025-12-17 08:12:41] apptainer version 1.4.5-2.el9
[2025-12-17 08:12:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 08:12:42] c8-7-5.aglt2.org
[2025-12-17 08:12:42] apptainer works
[2025-12-17 08:12:42] Set ATHENA_PROC_NUMBER=8
[2025-12-17 08:12:42] Set ATHENA_CORE_NUMBER=8
[2025-12-17 08:12:42] Starting ATLAS job with PandaID=6931735630
[2025-12-17 08:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 10:05:30]  *** The last 200 lines of the pilot log: ***
[2025-12-17 10:05:30] 2025-12-17 15:04:48,758 | INFO     | monitor loop #419: job 0:6931735630 is in state 'finished'
[2025-12-17 10:05:30] 2025-12-17 15:04:48,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 10:05:30] 2025-12-17 15:04:49,499 | INFO     | time since job start (6658s) is within the limit (174528.0s)
[2025-12-17 10:05:30] 2025-12-17 15:04:51,275 | INFO     | monitor loop #420: job 0:6931735630 is in state 'finished'
[2025-12-17 10:05:30] 2025-12-17 15:04:51,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 10:05:30] 2025-12-17 15:04:51,506 | INFO     | time since job start (6660s) is within the limit (174528.0s)
[2025-12-17 10:05:30] 2025-12-17 15:04:53,518 | INFO     | time since job start (6662s) is within the limit (174528.0s)
[2025-12-17 10:05:30] 2025-12-17 15:04:53,819 | INFO     | monitor loop #421: job 0:6931735630 is in state 'finished'
[2025-12-17 10:05:30] 2025-12-17 15:04:53,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,126 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 10:05:30] 2025-12-17 15:04:54,139 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9879453125013
[2025-12-17 10:05:30] 2025-12-17 15:04:54,191 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6931735630/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,191 | INFO     | extracted standard info from prmon json
[2025-12-17 10:05:30] 2025-12-17 15:04:54,191 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 10:05:30] 2025-12-17 15:04:54,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 10:05:30] 2025-12-17 15:04:54,208 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 10:05:30] 2025-12-17 15:04:54,208 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 10:05:30] 2025-12-17 15:04:54,210 | INFO     | fitting pss+swap vs Time
[2025-12-17 10:05:30] 2025-12-17 15:04:54,210 | INFO     | sum of square deviations: 379843019.5887843
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | sum of deviations: 26182422924.859818
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | mean x: 1765980584.2803738
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | mean y: 2439140.504672897
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | intersect: -121725875321.54967
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | chi2: 3.980697390448559
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | sum of square deviations: 329037915.81372494
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | sum of deviations: 32218960331.970577
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | mean x: 1765980431.77451
[2025-12-17 10:05:30] 2025-12-17 15:04:54,211 | INFO     | mean y: 2456414.911764706
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | intersect: -172920026812.18948
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | chi2: 3.177378527591953
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | current chi2=3.177378527591953 (change=20.180354949464906 %)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | right removable region: 101
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | sum of square deviations: 329032916.67647
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | sum of deviations: -2144171461.911765
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | mean x: 1765980736.7941177
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | mean y: 2523447.1470588236
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | intersect: 11510689670.65927
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | chi2: 0.9612262558516004
[2025-12-17 10:05:30] 2025-12-17 15:04:54,212 | INFO     | current chi2=0.9612262558516004 (change=75.85281769576345 %)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | sum of square deviations: 282973188.3298963
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | sum of deviations: -6215881753.010309
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | mean x: 1765980889.298969
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | mean y: 2536654.8969072164
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | intersect: 38794651380.48358
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | chi2: 0.8770624271646575
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | current chi2=0.8770624271646575 (change=8.755881164770901 %)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | left removable region: 20
[2025-12-17 10:05:30] 2025-12-17 15:04:54,233 | INFO     | sum of square deviations: 164776764.02469143
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | sum of deviations: 223468084.5061728
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | mean x: 1765981011.271605
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | mean y: 2563353.5679012346
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | intersect: -2392436913.605713
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | chi2: 0.0007600686577654569
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | current memory leak: 1.36 B/s (using 81 data points, chi2=0.00)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | ..............................
[2025-12-17 10:05:30] 2025-12-17 15:04:54,234 | INFO     | . Timing measurements:
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . get job = 0 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . initial setup = 7 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . payload setup = 40 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . stage-in = 0 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . payload execution = 6519 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . stage-out = 2 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | . log creation = 0 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,235 | INFO     | ..............................
[2025-12-17 10:05:30] 2025-12-17 15:04:54,482 | INFO     | 
[2025-12-17 10:05:30] 2025-12-17 15:04:54,482 | INFO     | job summary report
[2025-12-17 10:05:30] 2025-12-17 15:04:54,482 | INFO     | --------------------------------------------------
[2025-12-17 10:05:30] 2025-12-17 15:04:54,482 | INFO     | PanDA job id: 6931735630
[2025-12-17 10:05:30] 2025-12-17 15:04:54,482 | INFO     | task id: 47886831
[2025-12-17 10:05:30] 2025-12-17 15:04:54,482 | INFO     | errors: (none)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | pilot state: finished 
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | transexitcode: 0
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | exeerrorcode: 0
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | exeerrordiag: 
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | exitcode: 0
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | exitmsg: OK
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | cpuconsumptiontime: 24601 s
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | nevents: 400
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | neventsw: 0
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | pid: 3252818
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | pgrp: 3252818
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | corecount: 8
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | event service: False
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | sizes: {0: 2283993, 11: 2283993, 22: 2284021, 29: 2284311, 33: 2284339, 6563: 2311385, 6564: 2311512, 6568: 2320566, 6569: 2320622, 6606: 2320816}
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | --------------------------------------------------
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | 
[2025-12-17 10:05:30] 2025-12-17 15:04:54,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | job 6931735630 has completed (purged errors)
[2025-12-17 10:05:30] 2025-12-17 15:04:54,609 | INFO     | overall cleanup function is called
[2025-12-17 10:05:30] 2025-12-17 15:04:55,625 | INFO     | --- collectZombieJob: --- 10, [3252818]
[2025-12-17 10:05:30] 2025-12-17 15:04:55,625 | INFO     | zombie collector waiting for pid 3252818
[2025-12-17 10:05:30] 2025-12-17 15:04:55,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 10:05:30] 2025-12-17 15:04:55,625 | INFO     | collected zombie processes
[2025-12-17 10:05:30] 2025-12-17 15:04:55,625 | INFO     | will attempt to kill all subprocesses of pid=3252818
[2025-12-17 10:05:30] 2025-12-17 15:04:57,425 | INFO     | process IDs to be killed: [3252818] (in reverse order)
[2025-12-17 10:05:30] 2025-12-17 15:04:58,365 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 10:05:30] 2025-12-17 15:04:58,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 10:05:30] 2025-12-17 15:04:58,482 | INFO     | did not find any defunct processes belonging to 3252818
[2025-12-17 10:05:30] 2025-12-17 15:04:58,583 | INFO     | did not find any defunct processes belonging to 3252818
[2025-12-17 10:05:30] 2025-12-17 15:04:58,583 | INFO     | ready for new job
[2025-12-17 10:05:30] 2025-12-17 15:04:58,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 10:05:30] 2025-12-17 15:04:58,599 | INFO     | ***************************************
[2025-12-17 10:05:30] 2025-12-17 15:04:58,599 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 10:05:30] 2025-12-17 15:04:58,599 | INFO     | ***************************************
[2025-12-17 10:05:30] 2025-12-17 15:04:58,599 | INFO     | 
[2025-12-17 10:05:30] 2025-12-17 15:04:58,627 | INFO     | architecture information:
[2025-12-17 10:05:30] 2025-12-17 15:04:58,632 | INFO     | executing command: cat /etc/os-release
[2025-12-17 10:05:30] 2025-12-17 15:04:58,718 | INFO     | cat /etc/os-release:
[2025-12-17 10:05:30] NAME="CentOS Linux"
[2025-12-17 10:05:30] VERSION="7 (Core)"
[2025-12-17 10:05:30] ID="centos"
[2025-12-17 10:05:30] ID_LIKE="rhel fedora"
[2025-12-17 10:05:30] VERSION_ID="7"
[2025-12-17 10:05:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 10:05:30] ANSI_COLOR="0;31"
[2025-12-17 10:05:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 10:05:30] HOME_URL="https://www.centos.org/"
[2025-12-17 10:05:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 10:05:30] 
[2025-12-17 10:05:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 10:05:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 10:05:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 10:05:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 10:05:30] 
[2025-12-17 10:05:30] 2025-12-17 15:04:58,718 | INFO     | ***************************************
[2025-12-17 10:05:30] 2025-12-17 15:04:59,222 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-17 10:05:30] 2025-12-17 15:04:59,328 | INFO     | sufficient remaining disk space (169842049024 B)
[2025-12-17 10:05:30] 2025-12-17 15:04:59,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 10:05:30] 2025-12-17 15:04:59,328 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 10:05:30] 2025-12-17 15:04:59,328 | INFO     | update_server=False
[2025-12-17 10:05:30] 2025-12-17 15:04:59,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 10:05:30] 2025-12-17 15:04:59,456 | INFO     | all job control threads have been joined
[2025-12-17 10:05:30] 2025-12-17 15:04:59,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:05:30] 2025-12-17 15:04:59,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 10:05:30] 2025-12-17 15:04:59,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:05:30] 2025-12-17 15:04:59,876 | INFO     | aborting loop
[2025-12-17 10:05:30] 2025-12-17 15:05:00,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 10:05:30] 2025-12-17 15:05:00,346 | INFO     | [job] retrieve thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,432 | INFO     | all data control threads have been joined
[2025-12-17 10:05:30] 2025-12-17 15:05:00,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,462 | INFO     | [job] control thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,512 | INFO     | all payload control threads have been joined
[2025-12-17 10:05:30] 2025-12-17 15:05:00,528 | INFO     | [job] queue monitor thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,600 | INFO     | [payload] validate_post thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,614 | INFO     | [payload] failed_post thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,619 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,882 | INFO     | [job] job monitor thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:00,912 | INFO     | [job] validate thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:01,440 | INFO     | [data] control thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:01,531 | INFO     | [payload] control thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:01,648 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:01,803 | INFO     | [data] copytool_in thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:01,803 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:02,136 | INFO     | [data] copytool_out thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:02,299 | INFO     | [monitor] cgroup control has ended
[2025-12-17 10:05:30] 2025-12-17 15:05:03,704 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 10:05:30] 2025-12-17 15:05:04,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661885368128)>', '<ExcThread(monitor, started 140661252683520)>']
[2025-12-17 10:05:30] 2025-12-17 15:05:09,725 | INFO     | all workflow threads have been joined
[2025-12-17 10:05:30] 2025-12-17 15:05:09,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 10:05:30] 2025-12-17 15:05:09,751 | INFO     | traces error code: 0
[2025-12-17 10:05:30] 2025-12-17 15:05:09,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 10:05:30] 2025-12-17 15:05:29,699 | INFO     | PID=3241700 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 10:05:30] 2025-12-17 15:05:29,699 | INFO     | .. there are 42 such processes running
[2025-12-17 10:05:30] 2025-12-17 15:05:29,699 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 10:05:30] 2025-12-17 15:05:29,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 10:05:30] 2025-12-17 15:05:29,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 10:05:30] 2025-12-17 15:05:29,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 10:05:30] 2025-12-17 15:05:29,700 | INFO     | [monitor] control thread has ended
[2025-12-17 10:05:30] 2025-12-17 15:05:29,978 [wrapper] ==== pilot stdout END ====
[2025-12-17 10:05:30] 2025-12-17 15:05:29,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 10:05:30] 2025-12-17 15:05:30,006 [wrapper] pilotpid: 3241700
[2025-12-17 10:05:30] 2025-12-17 15:05:30,054 [wrapper] Pilot exit status: 0
[2025-12-17 10:05:30] 2025-12-17 15:05:30,133 [wrapper] pandaids: 6931735630
[2025-12-17 10:05:30] 2025-12-17 15:05:30,520 [wrapper] cleanup supervisor_pilot 3983693 3241701
[2025-12-17 10:05:30] 2025-12-17 15:05:30,523 [wrapper] Test setup, not cleaning
[2025-12-17 10:05:30] 2025-12-17 15:05:30,525 [wrapper] apfmon messages muted
[2025-12-17 10:05:30] 2025-12-17 15:05:30,528 [wrapper] ==== wrapper stdout END ====
[2025-12-17 10:05:30] 2025-12-17 15:05:30,530 [wrapper] ==== wrapper stderr END ====
[2025-12-17 10:05:30]  *** Error codes and diagnostics ***
[2025-12-17 10:05:30]     "exeErrorCode": 0,
[2025-12-17 10:05:30]     "exeErrorDiag": "",
[2025-12-17 10:05:30]     "pilotErrorCode": 0,
[2025-12-17 10:05:30]     "pilotErrorDiag": "",
[2025-12-17 10:05:30]  *** Listing of results directory ***
[2025-12-17 10:05:30] total 341168
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 20:05 pilot3.tar.gz
[2025-12-17 10:05:30] -rwx------. 1 boincer umatlas     36322 Dec 16 20:08 runpilot2-wrapper.sh
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 20:10 queuedata.json
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas       100 Dec 17 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 10:05:30] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 08:12 run_atlas
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas       105 Dec 17 08:12 job.xml
[2025-12-17 10:05:30] -rw-r--r--. 2 boincer umatlas 190697228 Dec 17 08:12 EVNT.47886829._000665.pool.root.1
[2025-12-17 10:05:30] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 08:12 start_atlas.sh
[2025-12-17 10:05:30] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 08:12 shared
[2025-12-17 10:05:30] -rw-r--r--. 2 boincer umatlas    592415 Dec 17 08:12 input.tar.gz
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas         0 Dec 17 08:12 boinc_lockfile
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 08:12 pandaJob.out
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas        57 Dec 17 08:12 setup.sh.local
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas    987423 Dec 17 08:13 agis_schedconf.cvmfs.json
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas   1516240 Dec 17 08:13 agis_ddmendpoints.agis.ALL.json
[2025-12-17 10:05:30] drwx------. 5 boincer umatlas      4096 Dec 17 08:13 pilot3
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas      7172 Dec 17 10:03 init_data.xml
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas 152332406 Dec 17 10:03 HITS.47886831._016664.pool.root.1
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas       530 Dec 17 10:03 boinc_task_state.xml
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas      1036 Dec 17 10:04 memory_monitor_summary.json
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas    350198 Dec 17 10:04 log.47886831._016664.job.log.tgz.1
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas      7769 Dec 17 10:04 heartbeat.json
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 10:05 boinc_mmap_file
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas        27 Dec 17 10:05 wrapper_checkpoint.txt
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas        95 Dec 17 10:05 pilot_heartbeat.json
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas       823 Dec 17 10:05 pilotlog.txt
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas    860044 Dec 17 10:05 log.47886831._016664.job.log.1
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas       357 Dec 17 10:05 output.list
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas       620 Dec 17 10:05 runtime_log
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas   1228800 Dec 17 10:05 result.tar.gz
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas      9332 Dec 17 10:05 runtime_log.err
[2025-12-17 10:05:30] -rw-------. 1 boincer umatlas       648 Dec 17 10:05 rP8MDm9Cvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp8aKDmFlkfQo.diag
[2025-12-17 10:05:30] -rw-r--r--. 1 boincer umatlas     21430 Dec 17 10:05 stderr.txt
[2025-12-17 10:05:31] HITS file was successfully produced:
[2025-12-17 10:05:31] -rw-------. 1 boincer umatlas 152332406 Dec 17 10:03 shared/HITS.pool.root.1
[2025-12-17 10:05:31]  *** Contents of shared directory: ***
[2025-12-17 10:05:31] total 336792
[2025-12-17 10:05:31] -rw-r--r--. 2 boincer umatlas 190697228 Dec 17 08:12 ATLAS.root_0
[2025-12-17 10:05:31] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 08:12 start_atlas.sh
[2025-12-17 10:05:31] -rw-r--r--. 2 boincer umatlas    592415 Dec 17 08:12 input.tar.gz
[2025-12-17 10:05:31] -rw-------. 1 boincer umatlas 152332406 Dec 17 10:03 HITS.pool.root.1
[2025-12-17 10:05:31] -rw-------. 1 boincer umatlas   1228800 Dec 17 10:05 result.tar.gz
10:05:33 (3236694): run_atlas exited; CPU time 24776.640883
10:05:33 (3236694): called boinc_finish(0)

</stderr_txt>
]]>

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