Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:18:57 (583376): wrapper (7.7.26015): starting
13:18:57 (583376): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 13:18:57] Arguments: --nthreads 12
[2025-12-17 13:18:57] Threads: 12
[2025-12-17 13:18:57] Checking for CVMFS
[2025-12-17 13:19:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:19:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:19:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:19:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:19:23] 2.13.3.0 583647 0 29780 154111 3 1 2961038 4096001 0 130560 0 0 0.000 1335 564 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-17 13:19:23] CVMFS is ok
[2025-12-17 13:19:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:19:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:19:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-17 13:19:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-17 13:19:23] Further information can be found at the LHC@home message board.
[2025-12-17 13:19:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:19:23] Checking for apptainer binary...
[2025-12-17 13:19:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 13:19:23] Running /usr/bin/apptainer --version
[2025-12-17 13:19:23] apptainer version 1.4.5-2.el10_1
[2025-12-17 13:19:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:19:23] OSIRIS
[2025-12-17 13:19:23] apptainer works
[2025-12-17 13:19:23] Set ATHENA_PROC_NUMBER=12
[2025-12-17 13:19:23] Set ATHENA_CORE_NUMBER=12
[2025-12-17 13:19:23] Starting ATLAS job with PandaID=6931734972
[2025-12-17 13:19:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/50 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 13:44:34]  *** The last 200 lines of the pilot log: ***
[2025-12-17 13:44:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/32/log.47886831._016417.job.log.tgz.1
[2025-12-17 13:44:34]  workdir=None
[2025-12-17 13:44:34] ]
[2025-12-17 13:44:34] 2025-12-17 12:43:22,051 | INFO     | transferring file log.47886831._016417.job.log.tgz.1 from /var/lib/boinc/slots/50/PanDA_Pilot-6931734972/log.47886831._016417.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-17 13:44:34] 2025-12-17 12:43:22,051 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/50/PanDA_Pilot-6931734972/log.47886831._016417.job.log.tgz.1 /var/lib/boinc/slots/50/log.47886831._016417.j
[2025-12-17 13:44:34] 2025-12-17 12:43:22,061 | INFO     | adding to output.list: log.47886831._016417.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/32/log.47886831._016417.job.log.tg
[2025-12-17 13:44:34] 2025-12-17 12:43:22,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 13:44:34] 2025-12-17 12:43:22,061 | INFO     | summary of transferred files:
[2025-12-17 13:44:34] 2025-12-17 12:43:22,061 | INFO     |  -- lfn=log.47886831._016417.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 13:44:34] 2025-12-17 12:43:22,061 | INFO     | stage-out finished correctly
[2025-12-17 13:44:34] 2025-12-17 12:43:22,812 | INFO     | time since job start (1436s) is within the limit (174528.0s)
[2025-12-17 13:44:34] 2025-12-17 12:43:23,906 | INFO     | monitor loop #113: job 0:6931734972 is in state 'finished'
[2025-12-17 13:44:34] 2025-12-17 12:43:23,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 13:44:34] 2025-12-17 12:43:24,815 | INFO     | time since job start (1438s) is within the limit (174528.0s)
[2025-12-17 13:44:34] 2025-12-17 12:43:25,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 13:44:34] 2025-12-17 12:43:26,408 | INFO     | monitor loop #114: job 0:6931734972 is in state 'finished'
[2025-12-17 13:44:34] 2025-12-17 12:43:26,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | job 6931734972 has state=finished
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | preparing for final server update for job 6931734972 in state='finished'
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | this job has now completed (state=finished)
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | log transfer has been attempted: DONE
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | job 6931734972 has finished - writing final server update
[2025-12-17 13:44:34] 2025-12-17 12:43:26,798 | INFO     | total number of processed events: 400 (read)
[2025-12-17 13:44:34] 2025-12-17 12:43:26,799 | INFO     | executing command: lscpu
[2025-12-17 13:44:34] 2025-12-17 12:43:26,814 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 13:44:34] 2025-12-17 12:43:26,820 | INFO     | time since job start (1440s) is within the limit (174528.0s)
[2025-12-17 13:44:34] 2025-12-17 12:43:27,899 | INFO     | PID=605392 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 13:44:34] 2025-12-17 12:43:27,900 | INFO     | .. there are 4 such processes running
[2025-12-17 13:44:34] 2025-12-17 12:43:28,900 | INFO     | time since job start (1442s) is within the limit (174528.0s)
[2025-12-17 13:44:34] 2025-12-17 12:43:28,910 | INFO     | monitor loop #115: job 0:6931734972 is in state 'finished'
[2025-12-17 13:44:34] 2025-12-17 12:43:28,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 13:44:34] 2025-12-17 12:43:30,905 | INFO     | time since job start (1444s) is within the limit (174528.0s)
[2025-12-17 13:44:34] 2025-12-17 12:43:31,412 | INFO     | monitor loop #116: job 0:6931734972 is in state 'finished'
[2025-12-17 13:44:34] 2025-12-17 12:43:31,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,116 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 13:44:34] 2025-12-17 12:43:32,118 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 4724.023395833333
[2025-12-17 13:44:34] 2025-12-17 12:43:32,121 | INFO     | using path: /var/lib/boinc/slots/50/PanDA_Pilot-6931734972/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,121 | INFO     | extracted standard info from prmon json
[2025-12-17 13:44:34] 2025-12-17 12:43:32,121 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 13:44:34] 2025-12-17 12:43:32,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 13:44:34] 2025-12-17 12:43:32,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 13:44:34] 2025-12-17 12:43:32,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | fitting pss+swap vs Time
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | sum of square deviations: 1518168.0
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | sum of deviations: 46252640.00000001
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | mean x: 1765974775.0
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | mean y: 2767870.705882353
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | intersect: -53799575161.920296
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | chi2: 1.7120023689636423e-05
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | current memory leak: 30.47 B/s (using 17 data points, chi2=0.00)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | could have reported an average CPU frequency of 4203 MHz (4 samples)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | ..............................
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . Timing measurements:
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . get job = 0 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . initial setup = 0 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . payload setup = 1 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . stage-in = 0 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . payload execution = 1418 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . stage-out = 0 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | . log creation = 0 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,122 | INFO     | ..............................
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | 
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | job summary report
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | --------------------------------------------------
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | PanDA job id: 6931734972
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | task id: 47886831
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | errors: (none)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | pilot state: finished 
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | transexitcode: 0
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | exeerrorcode: 0
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | exeerrordiag: 
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | exitcode: 0
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | exitmsg: OK
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | cpuconsumptiontime: 14734 s
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | nevents: 400
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | neventsw: 0
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | pid: 633641
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | pgrp: 633641
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | corecount: 12
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | event service: False
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | sizes: {0: 2283994, 1: 2284256, 10: 2284284, 1424: 2318042, 1427: 2318042, 1434: 2318236}
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | --------------------------------------------------
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | 
[2025-12-17 13:44:34] 2025-12-17 12:43:32,158 | INFO     | executing command: ls -lF /var/lib/boinc/slots/50
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 13:44:34] 2025-12-17 12:43:32,167 | INFO     | job 6931734972 has completed (purged errors)
[2025-12-17 13:44:34] 2025-12-17 12:43:32,167 | INFO     | overall cleanup function is called
[2025-12-17 13:44:34] 2025-12-17 12:43:33,172 | INFO     | --- collectZombieJob: --- 10, [633641]
[2025-12-17 13:44:34] 2025-12-17 12:43:33,173 | INFO     | zombie collector waiting for pid 633641
[2025-12-17 13:44:34] 2025-12-17 12:43:33,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 13:44:34] 2025-12-17 12:43:33,173 | INFO     | collected zombie processes
[2025-12-17 13:44:34] 2025-12-17 12:43:33,173 | INFO     | will attempt to kill all subprocesses of pid=633641
[2025-12-17 13:44:34] 2025-12-17 12:43:33,228 | INFO     | process IDs to be killed: [633641] (in reverse order)
[2025-12-17 13:44:34] 2025-12-17 12:43:33,257 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 13:44:34] 2025-12-17 12:43:33,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 13:44:34] 2025-12-17 12:43:33,260 | INFO     | did not find any defunct processes belonging to 633641
[2025-12-17 13:44:34] 2025-12-17 12:43:33,262 | INFO     | did not find any defunct processes belonging to 633641
[2025-12-17 13:44:34] 2025-12-17 12:43:33,263 | INFO     | ready for new job
[2025-12-17 13:44:34] 2025-12-17 12:43:33,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 13:44:34] 2025-12-17 12:43:33,263 | INFO     | ***************************************
[2025-12-17 13:44:34] 2025-12-17 12:43:33,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 13:44:34] 2025-12-17 12:43:33,263 | INFO     | ***************************************
[2025-12-17 13:44:34] 2025-12-17 12:43:33,263 | INFO     | 
[2025-12-17 13:44:34] 2025-12-17 12:43:33,264 | INFO     | architecture information:
[2025-12-17 13:44:34] 2025-12-17 12:43:33,264 | INFO     | executing command: cat /etc/os-release
[2025-12-17 13:44:34] 2025-12-17 12:43:33,271 | INFO     | cat /etc/os-release:
[2025-12-17 13:44:34] NAME="CentOS Linux"
[2025-12-17 13:44:34] VERSION="7 (Core)"
[2025-12-17 13:44:34] ID="centos"
[2025-12-17 13:44:34] ID_LIKE="rhel fedora"
[2025-12-17 13:44:34] VERSION_ID="7"
[2025-12-17 13:44:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 13:44:34] ANSI_COLOR="0;31"
[2025-12-17 13:44:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 13:44:34] HOME_URL="https://www.centos.org/"
[2025-12-17 13:44:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 13:44:34] 
[2025-12-17 13:44:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 13:44:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 13:44:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 13:44:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 13:44:34] 
[2025-12-17 13:44:34] 2025-12-17 12:43:33,271 | INFO     | ***************************************
[2025-12-17 13:44:34] 2025-12-17 12:43:33,774 | INFO     | executing command: df -mP /var/lib/boinc/slots/50
[2025-12-17 13:44:34] 2025-12-17 12:43:33,782 | INFO     | sufficient remaining disk space (1265041932288 B)
[2025-12-17 13:44:34] 2025-12-17 12:43:33,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 13:44:34] 2025-12-17 12:43:33,782 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 13:44:34] 2025-12-17 12:43:33,782 | INFO     | update_server=False
[2025-12-17 13:44:34] 2025-12-17 12:43:33,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 13:44:34] 2025-12-17 12:43:33,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:44:34] 2025-12-17 12:43:33,915 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 13:44:34] 2025-12-17 12:43:33,916 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 13:44:34] 2025-12-17 12:43:33,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:44:34] 2025-12-17 12:43:33,916 | INFO     | will abort loop
[2025-12-17 13:44:34] 2025-12-17 12:43:34,099 | INFO     | all data control threads have been joined
[2025-12-17 13:44:34] 2025-12-17 12:43:34,787 | INFO     | [job] retrieve thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:34,787 | INFO     | [job] queue monitor thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:34,803 | INFO     | all payload control threads have been joined
[2025-12-17 13:44:34] 2025-12-17 12:43:34,804 | INFO     | [payload] failed_post thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:34,921 | INFO     | [job] job monitor thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,105 | INFO     | [data] control thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 13:44:34] 2025-12-17 12:43:35,258 | INFO     | all job control threads have been joined
[2025-12-17 13:44:34] 2025-12-17 12:43:35,599 | INFO     | [payload] validate_post thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 13:44:34] 2025-12-17 12:43:35,685 | INFO     | [data] copytool_in thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,809 | INFO     | [payload] control thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,865 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,865 | INFO     | [job] validate thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:35,951 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:36,263 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:36,263 | INFO     | [job] control thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:37,112 | INFO     | [data] copytool_out thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:39,688 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:43:43,984 | INFO     | job.realtimelogging is not enabled
[2025-12-17 13:44:34] 2025-12-17 12:43:44,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 13:44:34] 2025-12-17 12:44:04,035 | INFO     | PID=605392 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 13:44:34] 2025-12-17 12:44:04,035 | INFO     | .. there are 4 such processes running
[2025-12-17 13:44:34] 2025-12-17 12:44:04,039 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 13:44:34] 2025-12-17 12:44:04,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 13:44:34] 2025-12-17 12:44:04,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 13:44:34] 2025-12-17 12:44:28,652 | INFO     | [monitor] cgroup control has ended
[2025-12-17 13:44:34] 2025-12-17 12:44:29,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241712904000)>', '<ExcThread(monitor, started 140240933082880)>']
[2025-12-17 13:44:34] 2025-12-17 12:44:30,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 13:44:34] 2025-12-17 12:44:30,161 | INFO     | [monitor] control thread has ended
[2025-12-17 13:44:34] 2025-12-17 12:44:34,352 | INFO     | all workflow threads have been joined
[2025-12-17 13:44:34] 2025-12-17 12:44:34,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 13:44:34] 2025-12-17 12:44:34,352 | INFO     | traces error code: 0
[2025-12-17 13:44:34] 2025-12-17 12:44:34,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 13:44:34] 2025-12-17 12:44:34,408 [wrapper] ==== pilot stdout END ====
[2025-12-17 13:44:34] 2025-12-17 12:44:34,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 13:44:34] 2025-12-17 12:44:34,410 [wrapper] pilotpid: 605392
[2025-12-17 13:44:34] 2025-12-17 12:44:34,410 [wrapper] Pilot exit status: 0
[2025-12-17 13:44:34] 2025-12-17 12:44:34,414 [wrapper] pandaids: 6931734972
[2025-12-17 13:44:34] 2025-12-17 12:44:34,433 [wrapper] cleanup supervisor_pilot  653701 605393
[2025-12-17 13:44:34] 2025-12-17 12:44:34,434 [wrapper] Test setup, not cleaning
[2025-12-17 13:44:34] 2025-12-17 12:44:34,435 [wrapper] apfmon messages muted
[2025-12-17 13:44:34] 2025-12-17 12:44:34,436 [wrapper] ==== wrapper stdout END ====
[2025-12-17 13:44:34] 2025-12-17 12:44:34,437 [wrapper] ==== wrapper stderr END ====
[2025-12-17 13:44:34]  *** Error codes and diagnostics ***
[2025-12-17 13:44:34]     "exeErrorCode": 0,
[2025-12-17 13:44:34]     "exeErrorDiag": "",
[2025-12-17 13:44:34]     "pilotErrorCode": 0,
[2025-12-17 13:44:34]     "pilotErrorDiag": "",
[2025-12-17 13:44:34]  *** Listing of results directory ***
[2025-12-17 13:44:34] total 336380
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc    579449 Dec 17 02:05 pilot3.tar.gz
[2025-12-17 13:44:34] -rwx------ 1 boinc boinc     36322 Dec 17 02:08 runpilot2-wrapper.sh
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc      5112 Dec 17 02:10 queuedata.json
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc       100 Dec 17 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 13:44:34] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 13:18 run_atlas
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc       105 Dec 17 13:18 job.xml
[2025-12-17 13:44:34] -rw-r--r-- 2 boinc boinc 194405839 Dec 17 13:18 EVNT.47886829._000655.pool.root.1
[2025-12-17 13:44:34] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:18 start_atlas.sh
[2025-12-17 13:44:34] drwxrwx--x 2 boinc boinc        68 Dec 17 13:18 shared
[2025-12-17 13:44:34] -rw-r--r-- 2 boinc boinc    592416 Dec 17 13:18 input.tar.gz
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc      9190 Dec 17 13:18 init_data.xml
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:18 boinc_setup_complete
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:18 boinc_lockfile
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc      2539 Dec 17 13:19 pandaJob.out
[2025-12-17 13:44:34] -rw------- 1 boinc boinc    987423 Dec 17 13:19 agis_schedconf.cvmfs.json
[2025-12-17 13:44:34] -rw------- 1 boinc boinc   1516240 Dec 17 13:19 agis_ddmendpoints.agis.ALL.json
[2025-12-17 13:44:34] drwx------ 5 boinc boinc      4096 Dec 17 13:19 pilot3
[2025-12-17 13:44:34] -rw------- 1 boinc boinc 144937677 Dec 17 13:43 HITS.47886831._016417.pool.root.1
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc       529 Dec 17 13:43 boinc_task_state.xml
[2025-12-17 13:44:34] -rw------- 1 boinc boinc      1022 Dec 17 13:43 memory_monitor_summary.json
[2025-12-17 13:44:34] -rw------- 1 boinc boinc    346658 Dec 17 13:43 log.47886831._016417.job.log.tgz.1
[2025-12-17 13:44:34] -rw------- 1 boinc boinc      7778 Dec 17 13:43 heartbeat.json
[2025-12-17 13:44:34] -rw------- 1 boinc boinc        95 Dec 17 13:44 pilot_heartbeat.json
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc      8192 Dec 17 13:44 boinc_mmap_file
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc        27 Dec 17 13:44 wrapper_checkpoint.txt
[2025-12-17 13:44:34] -rw------- 1 boinc boinc      5083 Dec 17 13:44 pilotlog.txt
[2025-12-17 13:44:34] -rw------- 1 boinc boinc    253894 Dec 17 13:44 log.47886831._016417.job.log.1
[2025-12-17 13:44:34] -rw------- 1 boinc boinc       357 Dec 17 13:44 output.list
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc       620 Dec 17 13:44 runtime_log
[2025-12-17 13:44:34] -rw------- 1 boinc boinc    624640 Dec 17 13:44 result.tar.gz
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc      8781 Dec 17 13:44 runtime_log.err
[2025-12-17 13:44:34] -rw------- 1 boinc boinc       639 Dec 17 13:44 GtwMDm1Cvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmadWKDmEwhXym.diag
[2025-12-17 13:44:34] -rw-r--r-- 1 boinc boinc     22525 Dec 17 13:44 stderr.txt
[2025-12-17 13:44:34] HITS file was successfully produced:
[2025-12-17 13:44:34] -rw------- 1 boinc boinc 144937677 Dec 17 13:43 shared/HITS.pool.root.1
[2025-12-17 13:44:34]  *** Contents of shared directory: ***
[2025-12-17 13:44:34] total 332604
[2025-12-17 13:44:34] -rw-r--r-- 2 boinc boinc 194405839 Dec 17 13:18 ATLAS.root_0
[2025-12-17 13:44:34] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:18 start_atlas.sh
[2025-12-17 13:44:34] -rw-r--r-- 2 boinc boinc    592416 Dec 17 13:18 input.tar.gz
[2025-12-17 13:44:34] -rw------- 1 boinc boinc 144937677 Dec 17 13:43 HITS.pool.root.1
[2025-12-17 13:44:34] -rw------- 1 boinc boinc    624640 Dec 17 13:44 result.tar.gz
13:44:36 (583376): run_atlas exited; CPU time 14740.435008
13:44:36 (583376): called boinc_finish(0)

</stderr_txt>
]]>

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