Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:26:48 (2955011): wrapper (7.7.26015): starting
07:26:48 (2955011): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 07:26:48] Arguments: --nthreads 8
[2025-12-17 07:26:48] Threads: 8
[2025-12-17 07:26:48] Checking for CVMFS
[2025-12-17 07:26:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 07:26:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 07:26:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 07:26:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 07:26:50] 2.13.3.0 14106 60239 218824 154111 3 1024 32358700 40959268 42980 16776704 0 817245705 99.724 593942843 47086 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 07:26:50] CVMFS is ok
[2025-12-17 07:26:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 07:26:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 07:26:50] Further information can be found at the LHC@home message board.
[2025-12-17 07:26:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 07:26:50] Checking for apptainer binary...
[2025-12-17 07:26:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 07:26:50] Running /usr/bin/apptainer --version
[2025-12-17 07:26:50] apptainer version 1.4.5-2.el9
[2025-12-17 07:26:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 07:26:51] c8-7-5.aglt2.org
[2025-12-17 07:26:51] apptainer works
[2025-12-17 07:26:51] Set ATHENA_PROC_NUMBER=8
[2025-12-17 07:26:51] Set ATHENA_CORE_NUMBER=8
[2025-12-17 07:26:51] Starting ATLAS job with PandaID=6931734711
[2025-12-17 07:26:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 10:30:40]  *** The last 200 lines of the pilot log: ***
[2025-12-17 10:30:40] 2025-12-17 15:29:55,333 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 10:30:40] 2025-12-17 15:29:55,351 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9935078125004
[2025-12-17 10:30:40] 2025-12-17 15:29:55,410 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6931734711/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,410 | INFO     | extracted standard info from prmon json
[2025-12-17 10:30:40] 2025-12-17 15:29:55,410 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 10:30:40] 2025-12-17 15:29:55,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 10:30:40] 2025-12-17 15:29:55,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 10:30:40] 2025-12-17 15:29:55,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 10:30:40] 2025-12-17 15:29:55,429 | INFO     | fitting pss+swap vs Time
[2025-12-17 10:30:40] 2025-12-17 15:29:55,429 | INFO     | sum of square deviations: 1690433598.8863637
[2025-12-17 10:30:40] 2025-12-17 15:29:55,430 | INFO     | sum of deviations: 77207514661.6477
[2025-12-17 10:30:40] 2025-12-17 15:29:55,430 | INFO     | mean x: 1765979969.5795455
[2025-12-17 10:30:40] 2025-12-17 15:29:55,430 | INFO     | mean y: 2381861.846590909
[2025-12-17 10:30:40] 2025-12-17 15:29:55,430 | INFO     | intersect: -80655577423.459
[2025-12-17 10:30:40] 2025-12-17 15:29:55,430 | INFO     | chi2: 6.158972328291392
[2025-12-17 10:30:40] 2025-12-17 15:29:55,430 | INFO     | sum of square deviations: 1550416638.8538005
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | sum of deviations: 86440138325.345
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | mean x: 1765979817.0818713
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | mean y: 2391614.0467836256
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | intersect: -98456007143.32039
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | chi2: 5.38050694271597
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | current chi2=5.38050694271597 (change=12.639533741684827 %)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | right removable region: 170
[2025-12-17 10:30:40] 2025-12-17 15:29:55,431 | INFO     | sum of square deviations: 1550408098.8538005
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | sum of deviations: 19756667901.321632
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | mean x: 1765980122.0818713
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | mean y: 2444371.619883041
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | intersect: -22501232446.18097
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | chi2: 1.7196122820440152
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | current chi2=1.7196122820440152 (change=72.07955823823183 %)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,432 | INFO     | sum of square deviations: 1418346666.4819267
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | sum of deviations: -2417072453.228918
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | mean x: 1765980274.5783134
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | mean y: 2469724.325301205
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | intersect: 3011961250.9747725
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | chi2: 0.8944565863263896
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | current chi2=0.8944565863263896 (change=47.98498500701596 %)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,445 | INFO     | sum of square deviations: 1294016678.2484443
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | sum of deviations: -6433916877.341616
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | mean x: 1765980427.068323
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | mean y: 2474590.0310559007
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | intersect: 8783019281.42518
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | chi2: 0.8616022334519503
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | current chi2=0.8616022334519503 (change=3.673107602614336 %)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | left removable region: 30
[2025-12-17 10:30:40] 2025-12-17 15:29:55,446 | INFO     | sum of square deviations: 850829900.2857145
[2025-12-17 10:30:40] 2025-12-17 15:29:55,447 | INFO     | sum of deviations: 2052353500.857143
[2025-12-17 10:30:40] 2025-12-17 15:29:55,447 | INFO     | mean x: 1765980701.5714285
[2025-12-17 10:30:40] 2025-12-17 15:29:55,447 | INFO     | mean y: 2491335.2642857144
[2025-12-17 10:30:40] 2025-12-17 15:29:55,447 | INFO     | intersect: -4257369154.0052743
[2025-12-17 10:30:40] 2025-12-17 15:29:55,447 | INFO     | chi2: 0.00015078966714744457
[2025-12-17 10:30:40] 2025-12-17 15:29:55,447 | INFO     | current memory leak: 2.41 B/s (using 140 data points, chi2=0.00)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | ..............................
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . Timing measurements:
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . get job = 0 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . initial setup = 7 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . payload setup = 46 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . stage-in = 0 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . payload execution = 10749 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . stage-out = 4 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | . log creation = 0 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,448 | INFO     | ..............................
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | 
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | job summary report
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | --------------------------------------------------
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | PanDA job id: 6931734711
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | task id: 47898782
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | errors: (none)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | pilot state: finished 
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | transexitcode: 0
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | exeerrorcode: 0
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | exeerrordiag: 
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | exitcode: 0
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | exitmsg: OK
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | cpuconsumptiontime: 31664 s
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | nevents: 400
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | neventsw: 0
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | pid: 2973724
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | pgrp: 2973724
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | corecount: 8
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | event service: False
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | sizes: {0: 2283753, 1: 2284008, 2: 2284008, 13: 2284036, 23: 2284092, 31: 2284382, 34: 2284538, 10800: 2313509, 10801: 2313508, 10806: 2322562, 10808: 2322618, 108
[2025-12-17 10:30:40] 2025-12-17 15:29:55,666 | INFO     | --------------------------------------------------
[2025-12-17 10:30:40] 2025-12-17 15:29:55,667 | INFO     | 
[2025-12-17 10:30:40] 2025-12-17 15:29:55,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-17 10:30:40] 2025-12-17 15:29:55,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | job 6931734711 has completed (purged errors)
[2025-12-17 10:30:40] 2025-12-17 15:29:55,775 | INFO     | overall cleanup function is called
[2025-12-17 10:30:40] 2025-12-17 15:29:56,799 | INFO     | --- collectZombieJob: --- 10, [2973724]
[2025-12-17 10:30:40] 2025-12-17 15:29:56,799 | INFO     | zombie collector waiting for pid 2973724
[2025-12-17 10:30:40] 2025-12-17 15:29:56,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 10:30:40] 2025-12-17 15:29:56,799 | INFO     | collected zombie processes
[2025-12-17 10:30:40] 2025-12-17 15:29:56,799 | INFO     | will attempt to kill all subprocesses of pid=2973724
[2025-12-17 10:30:40] 2025-12-17 15:29:58,683 | INFO     | process IDs to be killed: [2973724] (in reverse order)
[2025-12-17 10:30:40] 2025-12-17 15:29:59,370 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 10:30:40] 2025-12-17 15:29:59,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 10:30:40] 2025-12-17 15:29:59,421 | INFO     | did not find any defunct processes belonging to 2973724
[2025-12-17 10:30:40] 2025-12-17 15:29:59,448 | INFO     | did not find any defunct processes belonging to 2973724
[2025-12-17 10:30:40] 2025-12-17 15:29:59,449 | INFO     | ready for new job
[2025-12-17 10:30:40] 2025-12-17 15:29:59,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 10:30:40] 2025-12-17 15:29:59,451 | INFO     | ***************************************
[2025-12-17 10:30:40] 2025-12-17 15:29:59,451 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 10:30:40] 2025-12-17 15:29:59,451 | INFO     | ***************************************
[2025-12-17 10:30:40] 2025-12-17 15:29:59,451 | INFO     | 
[2025-12-17 10:30:40] 2025-12-17 15:29:59,471 | INFO     | architecture information:
[2025-12-17 10:30:40] 2025-12-17 15:29:59,475 | INFO     | executing command: cat /etc/os-release
[2025-12-17 10:30:40] 2025-12-17 15:29:59,523 | INFO     | cat /etc/os-release:
[2025-12-17 10:30:40] NAME="CentOS Linux"
[2025-12-17 10:30:40] VERSION="7 (Core)"
[2025-12-17 10:30:40] ID="centos"
[2025-12-17 10:30:40] ID_LIKE="rhel fedora"
[2025-12-17 10:30:40] VERSION_ID="7"
[2025-12-17 10:30:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 10:30:40] ANSI_COLOR="0;31"
[2025-12-17 10:30:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 10:30:40] HOME_URL="https://www.centos.org/"
[2025-12-17 10:30:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 10:30:40] 
[2025-12-17 10:30:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 10:30:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 10:30:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 10:30:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 10:30:40] 
[2025-12-17 10:30:40] 2025-12-17 15:29:59,523 | INFO     | ***************************************
[2025-12-17 10:30:40] 2025-12-17 15:30:00,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-17 10:30:40] 2025-12-17 15:30:00,063 | INFO     | sufficient remaining disk space (170848681984 B)
[2025-12-17 10:30:40] 2025-12-17 15:30:00,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 10:30:40] 2025-12-17 15:30:00,063 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 10:30:40] 2025-12-17 15:30:00,063 | INFO     | update_server=False
[2025-12-17 10:30:40] 2025-12-17 15:30:00,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 10:30:40] 2025-12-17 15:30:00,204 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 10:30:40] 2025-12-17 15:30:00,204 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 10:30:40] 2025-12-17 15:30:00,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:30:40] 2025-12-17 15:30:00,204 | INFO     | will abort loop
[2025-12-17 10:30:40] 2025-12-17 15:30:00,253 | INFO     | all payload control threads have been joined
[2025-12-17 10:30:40] 2025-12-17 15:30:00,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 10:30:40] 2025-12-17 15:30:00,639 | INFO     | all data control threads have been joined
[2025-12-17 10:30:40] 2025-12-17 15:30:00,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:30:40] 2025-12-17 15:30:01,068 | INFO     | [job] retrieve thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,175 | INFO     | [payload] validate_post thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,175 | INFO     | [payload] failed_post thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,210 | INFO     | [job] job monitor thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,258 | INFO     | [payload] control thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,307 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,464 | INFO     | all job control threads have been joined
[2025-12-17 10:30:40] 2025-12-17 15:30:01,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 10:30:40] 2025-12-17 15:30:01,554 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,645 | INFO     | [data] control thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,648 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,648 | INFO     | [job] validate thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:01,703 | INFO     | [job] queue monitor thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:02,306 | INFO     | [data] copytool_in thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:02,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:02,470 | INFO     | [job] control thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:02,639 | INFO     | [data] copytool_out thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:05,484 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 10:30:40] 2025-12-17 15:30:29,825 | INFO     | PID=2961533 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 10:30:40] 2025-12-17 15:30:29,825 | INFO     | .. there are 38 such processes running
[2025-12-17 10:30:40] 2025-12-17 15:30:29,826 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 10:30:40] 2025-12-17 15:30:29,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 10:30:40] 2025-12-17 15:30:29,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 10:30:40] 2025-12-17 15:30:31,907 | INFO     | [monitor] cgroup control has ended
[2025-12-17 10:30:40] 2025-12-17 15:30:32,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615185049408)>', '<ExcThread(monitor, started 140613940934400)>']
[2025-12-17 10:30:40] 2025-12-17 15:30:32,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 10:30:40] 2025-12-17 15:30:32,844 | INFO     | [monitor] control thread has ended
[2025-12-17 10:30:40] 2025-12-17 15:30:37,591 | INFO     | all workflow threads have been joined
[2025-12-17 10:30:40] 2025-12-17 15:30:37,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 10:30:40] 2025-12-17 15:30:37,591 | INFO     | traces error code: 0
[2025-12-17 10:30:40] 2025-12-17 15:30:37,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 10:30:40] 2025-12-17 15:30:38,232 [wrapper] ==== pilot stdout END ====
[2025-12-17 10:30:40] 2025-12-17 15:30:38,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 10:30:40] 2025-12-17 15:30:38,291 [wrapper] pilotpid: 2961533
[2025-12-17 10:30:40] 2025-12-17 15:30:38,319 [wrapper] Pilot exit status: 0
[2025-12-17 10:30:40] 2025-12-17 15:30:38,460 [wrapper] pandaids: 6931734711
[2025-12-17 10:30:40] 2025-12-17 15:30:39,770 [wrapper] cleanup supervisor_pilot 4179579 2961534
[2025-12-17 10:30:40] 2025-12-17 15:30:39,889 [wrapper] Test setup, not cleaning
[2025-12-17 10:30:40] 2025-12-17 15:30:39,911 [wrapper] apfmon messages muted
[2025-12-17 10:30:40] 2025-12-17 15:30:39,942 [wrapper] ==== wrapper stdout END ====
[2025-12-17 10:30:40] 2025-12-17 15:30:39,974 [wrapper] ==== wrapper stderr END ====
[2025-12-17 10:30:40]  *** Error codes and diagnostics ***
[2025-12-17 10:30:40]     "exeErrorCode": 0,
[2025-12-17 10:30:40]     "exeErrorDiag": "",
[2025-12-17 10:30:40]     "pilotErrorCode": 0,
[2025-12-17 10:30:40]     "pilotErrorDiag": "",
[2025-12-17 10:30:40]  *** Listing of results directory ***
[2025-12-17 10:30:40] total 412220
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 20:05 pilot3.tar.gz
[2025-12-17 10:30:40] -rwx------. 1 boincer umatlas     36322 Dec 16 20:07 runpilot2-wrapper.sh
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 20:08 queuedata.json
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas       100 Dec 17 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 10:30:40] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 07:26 run_atlas
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas       105 Dec 17 07:26 job.xml
[2025-12-17 10:30:40] -rw-r--r--. 2 boincer umatlas 216266319 Dec 17 07:26 EVNT.47898779._000216.pool.root.1
[2025-12-17 10:30:40] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 07:26 start_atlas.sh
[2025-12-17 10:30:40] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 07:26 shared
[2025-12-17 10:30:40] -rw-r--r--. 2 boincer umatlas    592392 Dec 17 07:26 input.tar.gz
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas         0 Dec 17 07:26 boinc_lockfile
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas      2522 Dec 17 07:26 pandaJob.out
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas        57 Dec 17 07:26 setup.sh.local
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas    987423 Dec 17 07:28 agis_schedconf.cvmfs.json
[2025-12-17 10:30:40] drwx------. 5 boincer umatlas      4096 Dec 17 07:28 pilot3
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas      7171 Dec 17 10:27 init_data.xml
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas 198375961 Dec 17 10:28 HITS.47898782._005338.pool.root.1
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas       530 Dec 17 10:28 boinc_task_state.xml
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas      1039 Dec 17 10:29 memory_monitor_summary.json
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas   1516240 Dec 17 10:29 agis_ddmendpoints.agis.ALL.json
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas    401250 Dec 17 10:29 log.47898782._005338.job.log.tgz.1
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas      7778 Dec 17 10:29 heartbeat.json
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas        95 Dec 17 10:30 pilot_heartbeat.json
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas      5011 Dec 17 10:30 pilotlog.txt
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 10:30 boinc_mmap_file
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas   1376838 Dec 17 10:30 log.47898782._005338.job.log.1
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas        27 Dec 17 10:30 wrapper_checkpoint.txt
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas       357 Dec 17 10:30 output.list
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas       620 Dec 17 10:30 runtime_log
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas   1802240 Dec 17 10:30 result.tar.gz
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas      9333 Dec 17 10:30 runtime_log.err
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas       653 Dec 17 10:30 n0UNDmZBvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzbWKDm8Aoban.diag
[2025-12-17 10:30:40] -rw-r--r--. 1 boincer umatlas     17088 Dec 17 10:30 stderr.txt
[2025-12-17 10:30:40] HITS file was successfully produced:
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas 198375961 Dec 17 10:28 shared/HITS.pool.root.1
[2025-12-17 10:30:40]  *** Contents of shared directory: ***
[2025-12-17 10:30:40] total 407288
[2025-12-17 10:30:40] -rw-r--r--. 2 boincer umatlas 216266319 Dec 17 07:26 ATLAS.root_0
[2025-12-17 10:30:40] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 07:26 start_atlas.sh
[2025-12-17 10:30:40] -rw-r--r--. 2 boincer umatlas    592392 Dec 17 07:26 input.tar.gz
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas 198375961 Dec 17 10:28 HITS.pool.root.1
[2025-12-17 10:30:40] -rw-------. 1 boincer umatlas   1802240 Dec 17 10:30 result.tar.gz
10:30:42 (2955011): run_atlas exited; CPU time 32005.973717
10:30:42 (2955011): called boinc_finish(0)

</stderr_txt>
]]>

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