Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
16:26:20 (387692): wrapper (7.7.26015): starting
16:26:20 (387692): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 16:26:20] Arguments: --nthreads 4
[2025-12-17 16:26:20] Threads: 4
[2025-12-17 16:26:20] Checking for CVMFS
[2025-12-17 16:26:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 16:26:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 16:26:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 16:26:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 16:26:21] 2.13.1.0 45898 5446 104388 154112 1 188 7136130 10240000 1822 130560 0 10805076 99.996 200717 291 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 16:26:21] CVMFS is ok
[2025-12-17 16:26:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 16:26:21] Checking for apptainer binary...
[2025-12-17 16:26:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 16:26:21] Running /usr/bin/apptainer --version
[2025-12-17 16:26:21] apptainer version 1.4.4
[2025-12-17 16:26:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 16:26:21] ellievl
[2025-12-17 16:26:21] apptainer works
[2025-12-17 16:26:21] Set ATHENA_PROC_NUMBER=4
[2025-12-17 16:26:21] Set ATHENA_CORE_NUMBER=4
[2025-12-17 16:26:21] Starting ATLAS job with PandaID=6932314451
[2025-12-17 16:26:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 17:59:52]  *** The last 200 lines of the pilot log: ***
[2025-12-17 17:59:52] ]
[2025-12-17 17:59:52] 2025-12-17 16:58:49,904 | INFO     | transferring file log.47886831._017378.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932314451/log.47886831._017378.job.log.tgz.1 to /var/li
[2025-12-17 17:59:52] 2025-12-17 16:58:49,904 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932314451/log.47886831._017378.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-12-17 17:59:52] 2025-12-17 16:58:49,932 | INFO     | adding to output.list: log.47886831._017378.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/36/log.47886831._017378.job.log.tg
[2025-12-17 17:59:52] 2025-12-17 16:58:49,934 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 17:59:52] 2025-12-17 16:58:49,934 | INFO     | summary of transferred files:
[2025-12-17 17:59:52] 2025-12-17 16:58:49,934 | INFO     |  -- lfn=log.47886831._017378.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 17:59:52] 2025-12-17 16:58:49,934 | INFO     | stage-out finished correctly
[2025-12-17 17:59:52] 2025-12-17 16:58:50,242 | INFO     | monitor loop #412: job 0:6932314451 is in state 'finished'
[2025-12-17 17:59:52] 2025-12-17 16:58:50,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 17:59:52] 2025-12-17 16:58:50,558 | INFO     | PID=391543 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 17:59:52] 2025-12-17 16:58:50,559 | INFO     | .. there are 3 such processes running
[2025-12-17 17:59:52] 2025-12-17 16:58:51,560 | INFO     | time since job start (5532s) is within the limit (174528.0s)
[2025-12-17 17:59:52] 2025-12-17 16:58:52,747 | INFO     | monitor loop #413: job 0:6932314451 is in state 'finished'
[2025-12-17 17:59:52] 2025-12-17 16:58:52,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 17:59:52] 2025-12-17 16:58:53,378 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 17:59:52] 2025-12-17 16:58:53,566 | INFO     | time since job start (5534s) is within the limit (174528.0s)
[2025-12-17 17:59:52] 2025-12-17 16:58:55,018 | INFO     | job 6932314451 has state=finished
[2025-12-17 17:59:52] 2025-12-17 16:58:55,019 | INFO     | preparing for final server update for job 6932314451 in state='finished'
[2025-12-17 17:59:52] 2025-12-17 16:58:55,019 | INFO     | this job has now completed (state=finished)
[2025-12-17 17:59:52] 2025-12-17 16:58:55,019 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 17:59:52] 2025-12-17 16:58:55,019 | INFO     | log transfer has been attempted: DONE
[2025-12-17 17:59:52] 2025-12-17 16:58:55,020 | INFO     | job 6932314451 has finished - writing final server update
[2025-12-17 17:59:52] 2025-12-17 16:58:55,020 | INFO     | total number of processed events: 400 (read)
[2025-12-17 17:59:52] 2025-12-17 16:58:55,021 | INFO     | executing command: lscpu
[2025-12-17 17:59:52] 2025-12-17 16:58:55,054 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 17:59:52] 2025-12-17 16:58:55,252 | INFO     | monitor loop #414: job 0:6932314451 is in state 'finished'
[2025-12-17 17:59:52] 2025-12-17 16:58:55,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 17:59:52] 2025-12-17 16:58:55,573 | INFO     | time since job start (5536s) is within the limit (174528.0s)
[2025-12-17 17:59:52] 2025-12-17 16:58:57,580 | INFO     | time since job start (5538s) is within the limit (174528.0s)
[2025-12-17 17:59:52] 2025-12-17 16:58:57,757 | INFO     | monitor loop #415: job 0:6932314451 is in state 'finished'
[2025-12-17 17:59:52] 2025-12-17 16:58:57,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 17:59:52] 2025-12-17 16:58:59,586 | INFO     | time since job start (5540s) is within the limit (174528.0s)
[2025-12-17 17:59:52] 2025-12-17 16:59:00,261 | INFO     | monitor loop #416: job 0:6932314451 is in state 'finished'
[2025-12-17 17:59:52] 2025-12-17 16:59:00,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 17:59:52] 2025-12-17 16:59:01,589 | INFO     | time since job start (5542s) is within the limit (174528.0s)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,048 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 17:59:52] 2025-12-17 16:59:02,050 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3700.0359999999987
[2025-12-17 17:59:52] 2025-12-17 16:59:02,052 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6932314451/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,054 | INFO     | extracted standard info from prmon json
[2025-12-17 17:59:52] 2025-12-17 16:59:02,054 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 17:59:52] 2025-12-17 16:59:02,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 17:59:52] 2025-12-17 16:59:02,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 17:59:52] 2025-12-17 16:59:02,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | fitting pss+swap vs Time
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | sum of square deviations: 177275882.0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | sum of deviations: 1224842729.0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | mean x: 1765988043.0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | mean y: 2448663.7108433736
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | intersect: -12199197660.460255
[2025-12-17 17:59:52] 2025-12-17 16:59:02,056 | INFO     | chi2: 0.0005284827977784178
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | current memory leak: 6.91 B/s (using 83 data points, chi2=0.00)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | ..............................
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . Timing measurements:
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . get job = 0 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . initial setup = 1 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . payload setup = 10 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . stage-in = 0 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . payload execution = 5497 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . stage-out = 0 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | . log creation = 0 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,057 | INFO     | ..............................
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | 
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | job summary report
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | --------------------------------------------------
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | PanDA job id: 6932314451
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | task id: 47886831
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | errors: (none)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,346 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | pilot state: finished 
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | transexitcode: 0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | exeerrorcode: 0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | exeerrordiag: 
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | exitcode: 0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | exitmsg: OK
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | cpuconsumptiontime: 20867 s
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | nevents: 400
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | neventsw: 0
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | pid: 398190
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | pgrp: 398190
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | corecount: 4
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | event service: False
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | sizes: {0: 2284007, 8: 2284269, 11: 2284297, 5512: 2310814, 5513: 2319840, 5516: 2319896, 5525: 2320218}
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | --------------------------------------------------
[2025-12-17 17:59:52] 2025-12-17 16:59:02,347 | INFO     | 
[2025-12-17 17:59:52] 2025-12-17 16:59:02,348 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-12-17 17:59:52] 2025-12-17 16:59:02,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | job 6932314451 has completed (purged errors)
[2025-12-17 17:59:52] 2025-12-17 16:59:02,378 | INFO     | overall cleanup function is called
[2025-12-17 17:59:52] 2025-12-17 16:59:03,386 | INFO     | --- collectZombieJob: --- 10, [398190]
[2025-12-17 17:59:52] 2025-12-17 16:59:03,386 | INFO     | zombie collector waiting for pid 398190
[2025-12-17 17:59:52] 2025-12-17 16:59:03,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 17:59:52] 2025-12-17 16:59:03,387 | INFO     | collected zombie processes
[2025-12-17 17:59:52] 2025-12-17 16:59:03,387 | INFO     | will attempt to kill all subprocesses of pid=398190
[2025-12-17 17:59:52] 2025-12-17 16:59:03,589 | INFO     | process IDs to be killed: [398190] (in reverse order)
[2025-12-17 17:59:52] 2025-12-17 16:59:03,677 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 17:59:52] 2025-12-17 16:59:03,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 17:59:52] 2025-12-17 16:59:03,683 | INFO     | did not find any defunct processes belonging to 398190
[2025-12-17 17:59:52] 2025-12-17 16:59:03,688 | INFO     | did not find any defunct processes belonging to 398190
[2025-12-17 17:59:52] 2025-12-17 16:59:03,688 | INFO     | ready for new job
[2025-12-17 17:59:52] 2025-12-17 16:59:03,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 17:59:52] 2025-12-17 16:59:03,690 | INFO     | ***************************************
[2025-12-17 17:59:52] 2025-12-17 16:59:03,691 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 17:59:52] 2025-12-17 16:59:03,691 | INFO     | ***************************************
[2025-12-17 17:59:52] 2025-12-17 16:59:03,691 | INFO     | 
[2025-12-17 17:59:52] 2025-12-17 16:59:03,691 | INFO     | pilot is running in a VM
[2025-12-17 17:59:52] 2025-12-17 16:59:03,691 | INFO     | architecture information:
[2025-12-17 17:59:52] 2025-12-17 16:59:03,692 | INFO     | executing command: cat /etc/os-release
[2025-12-17 17:59:52] 2025-12-17 16:59:03,712 | INFO     | cat /etc/os-release:
[2025-12-17 17:59:52] NAME="CentOS Linux"
[2025-12-17 17:59:52] VERSION="7 (Core)"
[2025-12-17 17:59:52] ID="centos"
[2025-12-17 17:59:52] ID_LIKE="rhel fedora"
[2025-12-17 17:59:52] VERSION_ID="7"
[2025-12-17 17:59:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 17:59:52] ANSI_COLOR="0;31"
[2025-12-17 17:59:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 17:59:52] HOME_URL="https://www.centos.org/"
[2025-12-17 17:59:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 17:59:52] 
[2025-12-17 17:59:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 17:59:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 17:59:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 17:59:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 17:59:52] 
[2025-12-17 17:59:52] 2025-12-17 16:59:03,712 | INFO     | ***************************************
[2025-12-17 17:59:52] 2025-12-17 16:59:04,216 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-12-17 17:59:52] 2025-12-17 16:59:04,233 | INFO     | sufficient remaining disk space (53763637248 B)
[2025-12-17 17:59:52] 2025-12-17 16:59:04,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 17:59:52] 2025-12-17 16:59:04,234 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 17:59:52] 2025-12-17 16:59:04,234 | INFO     | update_server=False
[2025-12-17 17:59:52] 2025-12-17 16:59:04,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 17:59:52] 2025-12-17 16:59:04,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 17:59:52] 2025-12-17 16:59:04,235 | INFO     | aborting loop
[2025-12-17 17:59:52] 2025-12-17 16:59:04,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 17:59:52] 2025-12-17 16:59:04,605 | INFO     | all data control threads have been joined
[2025-12-17 17:59:52] 2025-12-17 16:59:05,067 | INFO     | all payload control threads have been joined
[2025-12-17 17:59:52] 2025-12-17 16:59:05,216 | INFO     | all job control threads have been joined
[2025-12-17 17:59:52] 2025-12-17 16:59:05,240 | INFO     | [job] retrieve thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:05,241 | INFO     | [job] job monitor thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:05,287 | INFO     | [data] copytool_in thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:05,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 17:59:52] 2025-12-17 16:59:05,606 | INFO     | [data] control thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:05,966 | INFO     | [payload] failed_post thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,073 | INFO     | [payload] control thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,222 | INFO     | [job] control thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,451 | INFO     | [job] validate thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,552 | INFO     | [payload] validate_post thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,592 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,601 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:06,651 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:07,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 17:59:52] 2025-12-17 16:59:07,510 | INFO     | [data] copytool_out thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:08,122 | INFO     | [job] queue monitor thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:08,243 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:14,433 | INFO     | job.realtimelogging is not enabled
[2025-12-17 17:59:52] 2025-12-17 16:59:15,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 17:59:52] 2025-12-17 16:59:34,928 | INFO     | PID=391543 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 17:59:52] 2025-12-17 16:59:34,928 | INFO     | .. there are 3 such processes running
[2025-12-17 17:59:52] 2025-12-17 16:59:34,929 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 17:59:52] 2025-12-17 16:59:34,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 17:59:52] 2025-12-17 16:59:34,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 17:59:52] 2025-12-17 16:59:45,641 | INFO     | [monitor] cgroup control has ended
[2025-12-17 17:59:52] 2025-12-17 16:59:46,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135891719792448)>', '<ExcThread(monitor, started 135890399647488)>']
[2025-12-17 17:59:52] 2025-12-17 16:59:46,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 17:59:52] 2025-12-17 16:59:46,996 | INFO     | [monitor] control thread has ended
[2025-12-17 17:59:52] 2025-12-17 16:59:51,643 | INFO     | all workflow threads have been joined
[2025-12-17 17:59:52] 2025-12-17 16:59:51,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 17:59:52] 2025-12-17 16:59:51,644 | INFO     | traces error code: 0
[2025-12-17 17:59:52] 2025-12-17 16:59:51,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 17:59:52] 2025-12-17 16:59:51,751 [wrapper] ==== pilot stdout END ====
[2025-12-17 17:59:52] 2025-12-17 16:59:51,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 17:59:52] 2025-12-17 16:59:51,763 [wrapper] pilotpid: 391543
[2025-12-17 17:59:52] 2025-12-17 16:59:51,769 [wrapper] Pilot exit status: 0
[2025-12-17 17:59:52] 2025-12-17 16:59:51,792 [wrapper] pandaids: 6932314451
[2025-12-17 17:59:52] 2025-12-17 16:59:51,867 [wrapper] cleanup supervisor_pilot  435665 391544
[2025-12-17 17:59:52] 2025-12-17 16:59:51,873 [wrapper] Test setup, not cleaning
[2025-12-17 17:59:52] 2025-12-17 16:59:51,880 [wrapper] apfmon messages muted
[2025-12-17 17:59:52] 2025-12-17 16:59:51,887 [wrapper] ==== wrapper stdout END ====
[2025-12-17 17:59:52] 2025-12-17 16:59:51,893 [wrapper] ==== wrapper stderr END ====
[2025-12-17 17:59:52]  *** Error codes and diagnostics ***
[2025-12-17 17:59:52]     "exeErrorCode": 0,
[2025-12-17 17:59:52]     "exeErrorDiag": "",
[2025-12-17 17:59:52]     "pilotErrorCode": 0,
[2025-12-17 17:59:52]     "pilotErrorDiag": "",
[2025-12-17 17:59:52]  *** Listing of results directory ***
[2025-12-17 17:59:52] insgesamt 339276
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc    579449 Dez 17 06:30 pilot3.tar.gz
[2025-12-17 17:59:52] -rwx------ 1 yeti boinc     36322 Dez 17 06:33 runpilot2-wrapper.sh
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc      5112 Dez 17 06:35 queuedata.json
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc       100 Dez 17 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 17:59:52] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 16:26 run_atlas
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc       105 Dez 17 16:26 job.xml
[2025-12-17 17:59:52] -rw-r--r-- 2 yeti boinc 190454575 Dez 17 16:26 EVNT.47886829._000632.pool.root.1
[2025-12-17 17:59:52] -rw-r--r-- 2 yeti boinc     15847 Dez 17 16:26 start_atlas.sh
[2025-12-17 17:59:52] drwxrwx--x 2 yeti boinc      4096 Dez 17 16:26 shared
[2025-12-17 17:59:52] -rw-r--r-- 2 yeti boinc    592420 Dez 17 16:26 input.tar.gz
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc      6556 Dez 17 16:26 init_data.xml
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc         0 Dez 17 16:26 boinc_setup_complete
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc         0 Dez 17 16:26 boinc_lockfile
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc      2539 Dez 17 16:26 pandaJob.out
[2025-12-17 17:59:52] -rw------- 1 yeti boinc        52 Dez 17 16:26 setup.sh.local
[2025-12-17 17:59:52] -rw------- 1 yeti boinc    987423 Dez 17 16:26 agis_schedconf.cvmfs.json
[2025-12-17 17:59:52] -rw------- 1 yeti boinc   1516240 Dez 17 16:26 agis_ddmendpoints.agis.ALL.json
[2025-12-17 17:59:52] drwx------ 5 yeti boinc      4096 Dez 17 16:26 pilot3
[2025-12-17 17:59:52] -rw------- 1 yeti boinc 150849550 Dez 17 17:58 HITS.47886831._017378.pool.root.1
[2025-12-17 17:59:52] -rw------- 1 yeti boinc      1017 Dez 17 17:58 memory_monitor_summary.json
[2025-12-17 17:59:52] -rw------- 1 yeti boinc    279137 Dez 17 17:58 log.47886831._017378.job.log.tgz.1
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc       530 Dez 17 17:58 boinc_task_state.xml
[2025-12-17 17:59:52] -rw------- 1 yeti boinc      7724 Dez 17 17:59 heartbeat.json
[2025-12-17 17:59:52] -rw------- 1 yeti boinc        95 Dez 17 17:59 pilot_heartbeat.json
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc      8192 Dez 17 17:59 boinc_mmap_file
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc        27 Dez 17 17:59 wrapper_checkpoint.txt
[2025-12-17 17:59:52] -rw------- 1 yeti boinc      4970 Dez 17 17:59 pilotlog.txt
[2025-12-17 17:59:52] -rw------- 1 yeti boinc    815539 Dez 17 17:59 log.47886831._017378.job.log.1
[2025-12-17 17:59:52] -rw------- 1 yeti boinc       357 Dez 17 17:59 output.list
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc       620 Dez 17 17:59 runtime_log
[2025-12-17 17:59:52] -rw------- 1 yeti boinc   1116160 Dez 17 17:59 result.tar.gz
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc      9537 Dez 17 17:59 runtime_log.err
[2025-12-17 17:59:52] -rw------- 1 yeti boinc       635 Dez 17 17:59 6wcNDmNLzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIYbKDmB0EiRo.diag
[2025-12-17 17:59:52] -rw-r--r-- 1 yeti boinc     22164 Dez 17 17:59 stderr.txt
[2025-12-17 17:59:52] HITS file was successfully produced:
[2025-12-17 17:59:52] -rw------- 1 yeti boinc 150849550 Dez 17 17:58 shared/HITS.pool.root.1
[2025-12-17 17:59:52]  *** Contents of shared directory: ***
[2025-12-17 17:59:52] insgesamt 335004
[2025-12-17 17:59:52] -rw-r--r-- 2 yeti boinc 190454575 Dez 17 16:26 ATLAS.root_0
[2025-12-17 17:59:52] -rw-r--r-- 2 yeti boinc     15847 Dez 17 16:26 start_atlas.sh
[2025-12-17 17:59:52] -rw-r--r-- 2 yeti boinc    592420 Dez 17 16:26 input.tar.gz
[2025-12-17 17:59:52] -rw------- 1 yeti boinc 150849550 Dez 17 17:58 HITS.pool.root.1
[2025-12-17 17:59:52] -rw------- 1 yeti boinc   1116160 Dez 17 17:59 result.tar.gz
17:59:53 (387692): run_atlas exited; CPU time 21092.878715
17:59:53 (387692): called boinc_finish(0)

</stderr_txt>
]]>

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