Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:28:17 (28899): wrapper (7.7.26015): starting
18:28:17 (28899): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 18:28:17] Arguments: --nthreads 8
[2025-12-17 18:28:17] Threads: 8
[2025-12-17 18:28:17] Checking for CVMFS
[2025-12-17 18:28:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 18:28:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 18:28:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 18:28:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 18:28:19] 2.11.2.0 6904 2596 66700 154115 1 60 13670753 25165824 4702 130560 0 2051148 99.989 416160 1908 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-17 18:28:19] CVMFS is ok
[2025-12-17 18:28:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 18:28:19] Checking for apptainer binary...
[2025-12-17 18:28:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 18:28:19] Running /usr/bin/apptainer --version
[2025-12-17 18:28:19] apptainer version 1.3.2-1.el7
[2025-12-17 18:28:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 18:28:38] cg-vwn474.simple-grid.lan
[2025-12-17 18:28:38] apptainer works
[2025-12-17 18:28:38] Set ATHENA_PROC_NUMBER=8
[2025-12-17 18:28:38] Set ATHENA_CORE_NUMBER=8
[2025-12-17 18:28:38] Starting ATLAS job with PandaID=6932081769
[2025-12-17 18:28:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 22:53:27]  *** The last 200 lines of the pilot log: ***
[2025-12-17 22:53:27] 2025-12-17 21:52:14,407 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 22:53:27] 2025-12-17 21:52:14,408 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-17 22:53:27] 2025-12-17 21:52:14,410 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6932081769/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,411 | INFO     | extracted standard info from prmon json
[2025-12-17 22:53:27] 2025-12-17 21:52:14,411 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 22:53:27] 2025-12-17 21:52:14,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 22:53:27] 2025-12-17 21:52:14,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 22:53:27] 2025-12-17 21:52:14,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 22:53:27] 2025-12-17 21:52:14,416 | INFO     | fitting pss+swap vs Time
[2025-12-17 22:53:27] 2025-12-17 21:52:14,416 | INFO     | sum of square deviations: 4729621702.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,424 | INFO     | sum of deviations: 62361649838.499985
[2025-12-17 22:53:27] 2025-12-17 21:52:14,425 | INFO     | mean x: 1766000714.5
[2025-12-17 22:53:27] 2025-12-17 21:52:14,425 | INFO     | mean y: 2486434.939516129
[2025-12-17 22:53:27] 2025-12-17 21:52:14,425 | INFO     | intersect: -23282825818.600582
[2025-12-17 22:53:27] 2025-12-17 21:52:14,425 | INFO     | chi2: 6.01067641114395
[2025-12-17 22:53:27] 2025-12-17 21:52:14,426 | INFO     | sum of square deviations: 4449281562.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,428 | INFO     | sum of deviations: 77594432375.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,428 | INFO     | mean x: 1766000562.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,428 | INFO     | mean y: 2494573.6131687243
[2025-12-17 22:53:27] 2025-12-17 21:52:14,428 | INFO     | intersect: -30796143200.329758
[2025-12-17 22:53:27] 2025-12-17 21:52:14,429 | INFO     | chi2: 5.287186689674032
[2025-12-17 22:53:27] 2025-12-17 21:52:14,429 | INFO     | current chi2=5.287186689674032 (change=12.036743820188848 %)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,429 | INFO     | right removable region: 242
[2025-12-17 22:53:27] 2025-12-17 21:52:14,429 | INFO     | sum of square deviations: 4449281562.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,431 | INFO     | sum of deviations: -22737968258.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,431 | INFO     | mean x: 1766000867.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,431 | INFO     | mean y: 2532681.3868312757
[2025-12-17 22:53:27] 2025-12-17 21:52:14,431 | INFO     | intersect: 9027646308.80947
[2025-12-17 22:53:27] 2025-12-17 21:52:14,432 | INFO     | chi2: 1.5304295276351725
[2025-12-17 22:53:27] 2025-12-17 21:52:14,432 | INFO     | current chi2=1.5304295276351725 (change=74.53814807269084 %)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,432 | INFO     | sum of square deviations: 4180243959.5
[2025-12-17 22:53:27] 2025-12-17 21:52:14,434 | INFO     | sum of deviations: -46503796947.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,434 | INFO     | mean x: 1766001019.5
[2025-12-17 22:53:27] 2025-12-17 21:52:14,434 | INFO     | mean y: 2546031.0588235296
[2025-12-17 22:53:27] 2025-12-17 21:52:14,435 | INFO     | intersect: 19648708698.76257
[2025-12-17 22:53:27] 2025-12-17 21:52:14,435 | INFO     | chi2: 0.9520041590788612
[2025-12-17 22:53:27] 2025-12-17 21:52:14,435 | INFO     | current chi2=0.9520041590788612 (change=37.79496919731398 %)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,435 | INFO     | sum of square deviations: 3922276332.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,437 | INFO     | sum of deviations: -42191182042.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,437 | INFO     | mean x: 1766001172.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,437 | INFO     | mean y: 2543456.819742489
[2025-12-17 22:53:27] 2025-12-17 21:52:14,437 | INFO     | intersect: 18999082871.02371
[2025-12-17 22:53:27] 2025-12-17 21:52:14,438 | INFO     | chi2: 0.9390583181233364
[2025-12-17 22:53:27] 2025-12-17 21:52:14,438 | INFO     | current chi2=0.9390583181233364 (change=1.3598513023357877 %)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,438 | INFO     | left removable region: 30
[2025-12-17 22:53:27] 2025-12-17 21:52:14,438 | INFO     | sum of square deviations: 2954447953.0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,440 | INFO     | sum of deviations: -1699297557.0000067
[2025-12-17 22:53:27] 2025-12-17 21:52:14,440 | INFO     | mean x: 1766001446.5
[2025-12-17 22:53:27] 2025-12-17 21:52:14,440 | INFO     | mean y: 2537029.537735849
[2025-12-17 22:53:27] 2025-12-17 21:52:14,440 | INFO     | intersect: 1018280745.9395418
[2025-12-17 22:53:27] 2025-12-17 21:52:14,441 | INFO     | chi2: 0.048299755342307536
[2025-12-17 22:53:27] 2025-12-17 21:52:14,441 | INFO     | current memory leak: -0.58 B/s (using 212 data points, chi2=0.05)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,446 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | ..............................
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . Timing measurements:
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . get job = 0 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . initial setup = 8 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . payload setup = 137 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . stage-in = 0 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . payload execution = 15231 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . stage-out = 3 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,447 | INFO     | . log creation = 1 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,448 | INFO     | ..............................
[2025-12-17 22:53:27] 2025-12-17 21:52:14,572 | INFO     | 
[2025-12-17 22:53:27] 2025-12-17 21:52:14,572 | INFO     | job summary report
[2025-12-17 22:53:27] 2025-12-17 21:52:14,572 | INFO     | --------------------------------------------------
[2025-12-17 22:53:27] 2025-12-17 21:52:14,572 | INFO     | PanDA job id: 6932081769
[2025-12-17 22:53:27] 2025-12-17 21:52:14,572 | INFO     | task id: 47929064
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | errors: (none)
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | pilot state: finished 
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | transexitcode: 0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | exeerrorcode: 0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | exeerrordiag: 
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | exitcode: 0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | exitmsg: OK
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | cpuconsumptiontime: 57533 s
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | nevents: 400
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | neventsw: 0
[2025-12-17 22:53:27] 2025-12-17 21:52:14,573 | INFO     | pid: 6836
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | pgrp: 6836
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | corecount: 8
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | event service: False
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | sizes: {0: 2283237, 1: 2283922, 2: 2284121, 12: 2284121, 23: 2284149, 34: 2284177, 45: 2284333, 55: 2284361, 66: 2284389, 77: 2284417, 87: 2284473, 89: 2285043, 98
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | --------------------------------------------------
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | 
[2025-12-17 22:53:27] 2025-12-17 21:52:14,574 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-17 22:53:27] 2025-12-17 21:52:14,848 | INFO     | time since job start (15625s) is within the limit (174528.0s)
[2025-12-17 22:53:27] 2025-12-17 21:52:15,031 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 22:53:27] 2025-12-17 21:52:15,033 | INFO     | job 6932081769 has completed (purged errors)
[2025-12-17 22:53:27] 2025-12-17 21:52:15,034 | INFO     | overall cleanup function is called
[2025-12-17 22:53:27] 2025-12-17 21:52:16,042 | INFO     | --- collectZombieJob: --- 10, [6836]
[2025-12-17 22:53:27] 2025-12-17 21:52:16,042 | INFO     | zombie collector waiting for pid 6836
[2025-12-17 22:53:27] 2025-12-17 21:52:16,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 22:53:27] 2025-12-17 21:52:16,043 | INFO     | collected zombie processes
[2025-12-17 22:53:27] 2025-12-17 21:52:16,043 | INFO     | will attempt to kill all subprocesses of pid=6836
[2025-12-17 22:53:27] 2025-12-17 21:52:16,151 | INFO     | process IDs to be killed: [6836] (in reverse order)
[2025-12-17 22:53:27] 2025-12-17 21:52:16,936 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 22:53:27] 2025-12-17 21:52:16,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 22:53:27] 2025-12-17 21:52:16,939 | INFO     | did not find any defunct processes belonging to 6836
[2025-12-17 22:53:27] 2025-12-17 21:52:16,942 | INFO     | did not find any defunct processes belonging to 6836
[2025-12-17 22:53:27] 2025-12-17 21:52:16,942 | INFO     | ready for new job
[2025-12-17 22:53:27] 2025-12-17 21:52:16,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 22:53:27] 2025-12-17 21:52:16,944 | INFO     | ***************************************
[2025-12-17 22:53:27] 2025-12-17 21:52:16,944 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 22:53:27] 2025-12-17 21:52:16,944 | INFO     | ***************************************
[2025-12-17 22:53:27] 2025-12-17 21:52:16,945 | INFO     | 
[2025-12-17 22:53:27] 2025-12-17 21:52:16,945 | INFO     | pilot is running in a VM
[2025-12-17 22:53:27] 2025-12-17 21:52:16,945 | INFO     | architecture information:
[2025-12-17 22:53:27] 2025-12-17 21:52:16,948 | INFO     | executing command: cat /etc/os-release
[2025-12-17 22:53:27] 2025-12-17 21:52:17,070 | INFO     | cat /etc/os-release:
[2025-12-17 22:53:27] NAME="CentOS Linux"
[2025-12-17 22:53:27] VERSION="7 (Core)"
[2025-12-17 22:53:27] ID="centos"
[2025-12-17 22:53:27] ID_LIKE="rhel fedora"
[2025-12-17 22:53:27] VERSION_ID="7"
[2025-12-17 22:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 22:53:27] ANSI_COLOR="0;31"
[2025-12-17 22:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 22:53:27] HOME_URL="https://www.centos.org/"
[2025-12-17 22:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 22:53:27] 
[2025-12-17 22:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 22:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 22:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 22:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 22:53:27] 
[2025-12-17 22:53:27] 2025-12-17 21:52:17,070 | INFO     | ***************************************
[2025-12-17 22:53:27] 2025-12-17 21:52:17,573 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-17 22:53:27] 2025-12-17 21:52:17,671 | INFO     | sufficient remaining disk space (495886270464 B)
[2025-12-17 22:53:27] 2025-12-17 21:52:17,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 22:53:27] 2025-12-17 21:52:17,671 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 22:53:27] 2025-12-17 21:52:17,671 | INFO     | update_server=False
[2025-12-17 22:53:27] 2025-12-17 21:52:17,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 22:53:27] 2025-12-17 21:52:17,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 22:53:27] 2025-12-17 21:52:17,870 | INFO     | all data control threads have been joined
[2025-12-17 22:53:27] 2025-12-17 21:52:18,015 | INFO     | all job control threads have been joined
[2025-12-17 22:53:27] 2025-12-17 21:52:18,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 22:53:27] 2025-12-17 21:52:18,056 | INFO     | aborting loop
[2025-12-17 22:53:27] 2025-12-17 21:52:18,677 | INFO     | [job] retrieve thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:18,685 | INFO     | [payload] failed_post thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:18,876 | INFO     | [data] control thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,021 | INFO     | [job] control thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,062 | INFO     | [job] job monitor thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,105 | INFO     | all payload control threads have been joined
[2025-12-17 22:53:27] 2025-12-17 21:52:19,117 | INFO     | [payload] validate_post thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,122 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,219 | INFO     | [job] validate thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,530 | INFO     | [data] copytool_in thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 22:53:27] 2025-12-17 21:52:19,611 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,679 | INFO     | [data] copytool_out thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:19,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 22:53:27] 2025-12-17 21:52:20,101 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:20,111 | INFO     | [payload] control thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:20,593 | INFO     | [job] queue monitor thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:23,940 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 22:53:27] 2025-12-17 21:52:48,003 | INFO     | PID=32690 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 22:53:27] 2025-12-17 21:52:48,003 | INFO     | .. there are 9 such processes running
[2025-12-17 22:53:27] 2025-12-17 21:52:48,004 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 22:53:27] 2025-12-17 21:52:48,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 22:53:27] 2025-12-17 21:52:48,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 22:53:27] 2025-12-17 21:53:16,064 | INFO     | [monitor] cgroup control has ended
[2025-12-17 22:53:27] 2025-12-17 21:53:17,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916567881536)>', '<ExcThread(monitor, started 139915958392576)>']
[2025-12-17 22:53:27] 2025-12-17 21:53:17,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 22:53:27] 2025-12-17 21:53:17,173 | INFO     | [monitor] control thread has ended
[2025-12-17 22:53:27] 2025-12-17 21:53:22,185 | INFO     | all workflow threads have been joined
[2025-12-17 22:53:27] 2025-12-17 21:53:22,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 22:53:27] 2025-12-17 21:53:22,186 | INFO     | traces error code: 0
[2025-12-17 22:53:27] 2025-12-17 21:53:22,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 22:53:27] 2025-12-17 21:53:22,512 [wrapper] ==== pilot stdout END ====
[2025-12-17 22:53:27] 2025-12-17 21:53:22,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 22:53:27] 2025-12-17 21:53:22,646 [wrapper] pilotpid: 32690
[2025-12-17 22:53:27] 2025-12-17 21:53:22,739 [wrapper] Pilot exit status: 0
[2025-12-17 22:53:27] 2025-12-17 21:53:23,102 [wrapper] pandaids: 6932081769
[2025-12-17 22:53:27] 2025-12-17 21:53:23,662 [wrapper] cleanup supervisor_pilot 27457 32691
[2025-12-17 22:53:27] 2025-12-17 21:53:23,769 [wrapper] Test setup, not cleaning
[2025-12-17 22:53:27] 2025-12-17 21:53:23,882 [wrapper] apfmon messages muted
[2025-12-17 22:53:27] 2025-12-17 21:53:23,967 [wrapper] ==== wrapper stdout END ====
[2025-12-17 22:53:27] 2025-12-17 21:53:24,029 [wrapper] ==== wrapper stderr END ====
[2025-12-17 22:53:27]  *** Error codes and diagnostics ***
[2025-12-17 22:53:27]     "exeErrorCode": 0,
[2025-12-17 22:53:27]     "exeErrorDiag": "",
[2025-12-17 22:53:27]     "pilotErrorCode": 0,
[2025-12-17 22:53:27]     "pilotErrorDiag": "",
[2025-12-17 22:53:27]  *** Listing of results directory ***
[2025-12-17 22:53:27] total 512108
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc    579449 Dec 17 06:30 pilot3.tar.gz
[2025-12-17 22:53:27] -rwx------. 1 boinc boinc     36322 Dec 17 06:30 runpilot2-wrapper.sh
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc      5112 Dec 17 06:32 queuedata.json
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc       100 Dec 17 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 22:53:27] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 18:28 run_atlas
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc       105 Dec 17 18:28 job.xml
[2025-12-17 22:53:27] -rw-r--r--. 2 boinc boinc 289085130 Dec 17 18:28 EVNT.47929062._000009.pool.root.1
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc      6392 Dec 17 18:28 init_data.xml
[2025-12-17 22:53:27] -rw-r--r--. 2 boinc boinc     15847 Dec 17 18:28 start_atlas.sh
[2025-12-17 22:53:27] drwxrwx--x. 2 boinc boinc        68 Dec 17 18:28 shared
[2025-12-17 22:53:27] -rw-r--r--. 2 boinc boinc    592399 Dec 17 18:28 input.tar.gz
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc         0 Dec 17 18:28 boinc_lockfile
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc      2586 Dec 17 18:28 pandaJob.out
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc    987432 Dec 17 18:31 agis_schedconf.cvmfs.json
[2025-12-17 22:53:27] drwx------. 5 boinc boinc      4096 Dec 17 18:31 pilot3
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc 226322535 Dec 17 22:50 HITS.47929064._000203.pool.root.1
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc       531 Dec 17 22:50 boinc_task_state.xml
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc      1021 Dec 17 22:50 memory_monitor_summary.json
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc   1516240 Dec 17 22:50 agis_ddmendpoints.agis.ALL.json
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc    458804 Dec 17 22:51 log.47929064._000203.job.log.tgz.1
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc      7769 Dec 17 22:52 heartbeat.json
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc        95 Dec 17 22:52 pilot_heartbeat.json
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc      8192 Dec 17 22:52 boinc_mmap_file
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc        28 Dec 17 22:52 wrapper_checkpoint.txt
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc      4884 Dec 17 22:53 pilotlog.txt
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc   2086351 Dec 17 22:53 log.47929064._000203.job.log.1
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc       357 Dec 17 22:53 output.list
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc       620 Dec 17 22:53 runtime_log
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc   2560000 Dec 17 22:53 result.tar.gz
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc      8817 Dec 17 22:53 runtime_log.err
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc       657 Dec 17 22:53 AEVNDmpIzp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmTbKDmoOkKim.diag
[2025-12-17 22:53:27] -rw-r--r--. 1 boinc boinc     20754 Dec 17 22:53 stderr.txt
[2025-12-17 22:53:27] HITS file was successfully produced:
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc 226322535 Dec 17 22:50 shared/HITS.pool.root.1
[2025-12-17 22:53:27]  *** Contents of shared directory: ***
[2025-12-17 22:53:27] total 506428
[2025-12-17 22:53:27] -rw-r--r--. 2 boinc boinc 289085130 Dec 17 18:28 ATLAS.root_0
[2025-12-17 22:53:27] -rw-r--r--. 2 boinc boinc     15847 Dec 17 18:28 start_atlas.sh
[2025-12-17 22:53:27] -rw-r--r--. 2 boinc boinc    592399 Dec 17 18:28 input.tar.gz
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc 226322535 Dec 17 22:50 HITS.pool.root.1
[2025-12-17 22:53:27] -rw-------. 1 boinc boinc   2560000 Dec 17 22:53 result.tar.gz
22:53:28 (28899): run_atlas exited; CPU time 57738.752403
22:53:28 (28899): called boinc_finish(0)

</stderr_txt>
]]>

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