Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:23:32 (4126051): wrapper (7.7.26015): starting
06:23:32 (4126051): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 06:23:32] Arguments: --nthreads 8
[2025-12-17 06:23:32] Threads: 8
[2025-12-17 06:23:32] Checking for CVMFS
[2025-12-17 06:23:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 06:23:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 06:23:32] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 06:23:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 06:23:33] 2.13.3.0 11830 60091 391276 154111 3 431 29176509 32935937 24794 16776704 0 322547694 99.496 413169099 32662 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 06:23:33] CVMFS is ok
[2025-12-17 06:23:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 06:23:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 06:23:33] Further information can be found at the LHC@home message board.
[2025-12-17 06:23:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 06:23:33] Checking for apptainer binary...
[2025-12-17 06:23:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 06:23:33] Running /usr/bin/apptainer --version
[2025-12-17 06:23:33] apptainer version 1.4.5-2.el9
[2025-12-17 06:23:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 06:23:34] c6-8-25-1.aglt2.org
[2025-12-17 06:23:34] apptainer works
[2025-12-17 06:23:34] Set ATHENA_PROC_NUMBER=8
[2025-12-17 06:23:34] Set ATHENA_CORE_NUMBER=8
[2025-12-17 06:23:34] Starting ATLAS job with PandaID=6932206718
[2025-12-17 06:23:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:19:39]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:19:39] 2025-12-17 20:18:43,713 | INFO     | monitor loop #1871: job 0:6932206718 is in state 'finished'
[2025-12-17 15:19:39] 2025-12-17 20:18:43,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 15:19:39] 2025-12-17 20:18:45,516 | INFO     | PID=4130930 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 15:19:39] 2025-12-17 20:18:45,516 | INFO     | .. there are 25 such processes running
[2025-12-17 15:19:39] 2025-12-17 20:18:46,229 | INFO     | monitor loop #1872: job 0:6932206718 is in state 'finished'
[2025-12-17 15:19:39] 2025-12-17 20:18:46,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,436 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 15:19:39] 2025-12-17 20:18:46,458 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2546.787385416666
[2025-12-17 15:19:39] 2025-12-17 20:18:46,517 | INFO     | time since job start (32051s) is within the limit (174528.0s)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,759 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6932206718/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,760 | INFO     | extracted standard info from prmon json
[2025-12-17 15:19:39] 2025-12-17 20:18:46,760 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 15:19:39] 2025-12-17 20:18:46,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 15:19:39] 2025-12-17 20:18:46,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 15:19:39] 2025-12-17 20:18:46,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 15:19:39] 2025-12-17 20:18:46,771 | INFO     | fitting pss+swap vs Time
[2025-12-17 15:19:39] 2025-12-17 20:18:46,772 | INFO     | sum of square deviations: 44358659264.66548
[2025-12-17 15:19:39] 2025-12-17 20:18:46,779 | INFO     | sum of deviations: -7778324801.252319
[2025-12-17 15:19:39] 2025-12-17 20:18:46,780 | INFO     | mean x: 1765986725.3479924
[2025-12-17 15:19:39] 2025-12-17 20:18:46,780 | INFO     | mean y: 2597356.90248566
[2025-12-17 15:19:39] 2025-12-17 20:18:46,780 | INFO     | intersect: 312264478.7714867
[2025-12-17 15:19:39] 2025-12-17 20:18:46,781 | INFO     | chi2: 3.2024478349390626
[2025-12-17 15:19:39] 2025-12-17 20:18:46,782 | INFO     | sum of square deviations: 43098493231.64473
[2025-12-17 15:19:39] 2025-12-17 20:18:46,789 | INFO     | sum of deviations: 25704489546.459427
[2025-12-17 15:19:39] 2025-12-17 20:18:46,789 | INFO     | mean x: 1765986572.8455598
[2025-12-17 15:19:39] 2025-12-17 20:18:46,789 | INFO     | mean y: 2601377.743243243
[2025-12-17 15:19:39] 2025-12-17 20:18:46,789 | INFO     | intersect: -1050655476.4329573
[2025-12-17 15:19:39] 2025-12-17 20:18:46,790 | INFO     | chi2: 2.523292551393575
[2025-12-17 15:19:39] 2025-12-17 20:18:46,790 | INFO     | current chi2=2.523292551393575 (change=21.20738005896077 %)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,790 | INFO     | right removable region: 517
[2025-12-17 15:19:39] 2025-12-17 20:18:46,791 | INFO     | sum of square deviations: 43098477801.55391
[2025-12-17 15:19:39] 2025-12-17 20:18:46,806 | INFO     | sum of deviations: -132242060230.3649
[2025-12-17 15:19:39] 2025-12-17 20:18:46,807 | INFO     | mean x: 1765986877.8513513
[2025-12-17 15:19:39] 2025-12-17 20:18:46,807 | INFO     | mean y: 2612382.306949807
[2025-12-17 15:19:39] 2025-12-17 20:18:46,807 | INFO     | intersect: 5421312878.927094
[2025-12-17 15:19:39] 2025-12-17 20:18:46,808 | INFO     | chi2: 0.9586655064942531
[2025-12-17 15:19:39] 2025-12-17 20:18:46,808 | INFO     | current chi2=0.9586655064942531 (change=70.06460195744313 %)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,809 | INFO     | sum of square deviations: 41862389813.43088
[2025-12-17 15:19:39] 2025-12-17 20:18:46,824 | INFO     | sum of deviations: -153295969282.23785
[2025-12-17 15:19:39] 2025-12-17 20:18:46,824 | INFO     | mean x: 1765987030.354776
[2025-12-17 15:19:39] 2025-12-17 20:18:46,824 | INFO     | mean y: 2614970.627680312
[2025-12-17 15:19:39] 2025-12-17 20:18:46,825 | INFO     | intersect: 6469486421.699029
[2025-12-17 15:19:39] 2025-12-17 20:18:46,833 | INFO     | chi2: 0.8659396395526237
[2025-12-17 15:19:39] 2025-12-17 20:18:46,834 | INFO     | current chi2=0.8659396395526237 (change=9.672390037346702 %)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,834 | INFO     | left removable region: 20
[2025-12-17 15:19:39] 2025-12-17 20:18:46,835 | INFO     | sum of square deviations: 38066240857.67407
[2025-12-17 15:19:39] 2025-12-17 20:18:46,858 | INFO     | sum of deviations: -115270478831.12071
[2025-12-17 15:19:39] 2025-12-17 20:18:46,858 | INFO     | mean x: 1765987152.3541248
[2025-12-17 15:19:39] 2025-12-17 20:18:46,858 | INFO     | mean y: 2618813.205231388
[2025-12-17 15:19:39] 2025-12-17 20:18:46,858 | INFO     | intersect: 5350301696.381987
[2025-12-17 15:19:39] 2025-12-17 20:18:46,859 | INFO     | chi2: 0.16795545741575635
[2025-12-17 15:19:39] 2025-12-17 20:18:46,860 | INFO     | current memory leak: -3.03 B/s (using 497 data points, chi2=0.17)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,861 | INFO     | could have reported an average CPU frequency of 2537 MHz (21 samples)
[2025-12-17 15:19:39] 2025-12-17 20:18:46,861 | INFO     | ..............................
[2025-12-17 15:19:39] 2025-12-17 20:18:46,861 | INFO     | . Timing measurements:
[2025-12-17 15:19:39] 2025-12-17 20:18:46,861 | INFO     | . get job = 0 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,861 | INFO     | . initial setup = 6 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,869 | INFO     | . payload setup = 36 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,869 | INFO     | . stage-in = 0 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,870 | INFO     | . payload execution = 31908 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,870 | INFO     | . stage-out = 4 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,870 | INFO     | . log creation = 0 s
[2025-12-17 15:19:39] 2025-12-17 20:18:46,870 | INFO     | ..............................
[2025-12-17 15:19:39] 2025-12-17 20:18:47,451 | INFO     | 
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | job summary report
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | --------------------------------------------------
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | PanDA job id: 6932206718
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | task id: 47928998
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | errors: (none)
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | pilot state: finished 
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | transexitcode: 0
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | exeerrorcode: 0
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | exeerrordiag: 
[2025-12-17 15:19:39] 2025-12-17 20:18:47,452 | INFO     | exitcode: 0
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | exitmsg: OK
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | cpuconsumptiontime: 107043 s
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | nevents: 400
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | neventsw: 0
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | pid: 4139077
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | pgrp: 4139077
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | corecount: 8
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | event service: False
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | sizes: {0: 2283795, 1: 2283879, 2: 2284078, 14: 2284078, 25: 2284106, 31: 2284396, 36: 2284552, 31950: 2322787, 31955: 2331785, 31957: 2331841, 31988: 2332035}
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | --------------------------------------------------
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | 
[2025-12-17 15:19:39] 2025-12-17 20:18:47,453 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 15:19:39] 2025-12-17 20:18:47,615 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,615 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 15:19:39] 2025-12-17 20:18:47,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 15:19:39] 2025-12-17 20:18:47,617 | INFO     | job 6932206718 has completed (purged errors)
[2025-12-17 15:19:39] 2025-12-17 20:18:47,617 | INFO     | overall cleanup function is called
[2025-12-17 15:19:39] 2025-12-17 20:18:48,643 | INFO     | --- collectZombieJob: --- 10, [4139077]
[2025-12-17 15:19:39] 2025-12-17 20:18:48,644 | INFO     | zombie collector waiting for pid 4139077
[2025-12-17 15:19:39] 2025-12-17 20:18:48,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 15:19:39] 2025-12-17 20:18:48,644 | INFO     | collected zombie processes
[2025-12-17 15:19:39] 2025-12-17 20:18:48,644 | INFO     | will attempt to kill all subprocesses of pid=4139077
[2025-12-17 15:19:39] 2025-12-17 20:18:49,968 | INFO     | process IDs to be killed: [4139077] (in reverse order)
[2025-12-17 15:19:39] 2025-12-17 20:18:50,298 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 15:19:39] 2025-12-17 20:18:50,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 15:19:39] 2025-12-17 20:18:50,337 | INFO     | did not find any defunct processes belonging to 4139077
[2025-12-17 15:19:39] 2025-12-17 20:18:50,388 | INFO     | did not find any defunct processes belonging to 4139077
[2025-12-17 15:19:39] 2025-12-17 20:18:50,389 | INFO     | ready for new job
[2025-12-17 15:19:39] 2025-12-17 20:18:50,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 15:19:39] 2025-12-17 20:18:50,401 | INFO     | ***************************************
[2025-12-17 15:19:39] 2025-12-17 20:18:50,403 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 15:19:39] 2025-12-17 20:18:50,403 | INFO     | ***************************************
[2025-12-17 15:19:39] 2025-12-17 20:18:50,403 | INFO     | 
[2025-12-17 15:19:39] 2025-12-17 20:18:50,425 | INFO     | architecture information:
[2025-12-17 15:19:39] 2025-12-17 20:18:50,433 | INFO     | executing command: cat /etc/os-release
[2025-12-17 15:19:39] 2025-12-17 20:18:50,480 | INFO     | cat /etc/os-release:
[2025-12-17 15:19:39] NAME="CentOS Linux"
[2025-12-17 15:19:39] VERSION="7 (Core)"
[2025-12-17 15:19:39] ID="centos"
[2025-12-17 15:19:39] ID_LIKE="rhel fedora"
[2025-12-17 15:19:39] VERSION_ID="7"
[2025-12-17 15:19:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 15:19:39] ANSI_COLOR="0;31"
[2025-12-17 15:19:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 15:19:39] HOME_URL="https://www.centos.org/"
[2025-12-17 15:19:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 15:19:39] 
[2025-12-17 15:19:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 15:19:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 15:19:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 15:19:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 15:19:39] 
[2025-12-17 15:19:39] 2025-12-17 20:18:50,481 | INFO     | ***************************************
[2025-12-17 15:19:39] 2025-12-17 20:18:50,986 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 15:19:39] 2025-12-17 20:18:51,092 | INFO     | sufficient remaining disk space (73037512704 B)
[2025-12-17 15:19:39] 2025-12-17 20:18:51,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 15:19:39] 2025-12-17 20:18:51,092 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 15:19:39] 2025-12-17 20:18:51,092 | INFO     | update_server=False
[2025-12-17 15:19:39] 2025-12-17 20:18:51,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 15:19:39] 2025-12-17 20:18:51,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 15:19:39] 2025-12-17 20:18:51,113 | INFO     | all payload control threads have been joined
[2025-12-17 15:19:39] 2025-12-17 20:18:51,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 15:19:39] 2025-12-17 20:18:51,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 15:19:39] 2025-12-17 20:18:51,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:19:39] 2025-12-17 20:18:51,268 | INFO     | will abort loop
[2025-12-17 15:19:39] 2025-12-17 20:18:51,269 | INFO     | all job control threads have been joined
[2025-12-17 15:19:39] 2025-12-17 20:18:52,098 | INFO     | [job] retrieve thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,119 | INFO     | [payload] control thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,120 | INFO     | all data control threads have been joined
[2025-12-17 15:19:39] 2025-12-17 20:18:52,273 | INFO     | [job] job monitor thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 15:19:39] 2025-12-17 20:18:52,278 | INFO     | [job] control thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,480 | INFO     | [payload] validate_post thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,502 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,549 | INFO     | [job] validate thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,936 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:52,971 | INFO     | [data] copytool_in thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,073 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,099 | INFO     | [data] copytool_out thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,126 | INFO     | [data] control thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,283 | INFO     | [job] queue monitor thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,508 | INFO     | [payload] failed_post thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:18:53,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 15:19:39] 2025-12-17 20:18:57,996 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:19:39] 2025-12-17 20:19:20,567 | INFO     | PID=4130930 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 15:19:39] 2025-12-17 20:19:20,567 | INFO     | .. there are 25 such processes running
[2025-12-17 15:19:39] 2025-12-17 20:19:20,568 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:19:39] 2025-12-17 20:19:20,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:19:39] 2025-12-17 20:19:20,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:19:39] 2025-12-17 20:19:31,878 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:19:39] 2025-12-17 20:19:32,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390163511104)>', '<ExcThread(monitor, started 140389453391616)>']
[2025-12-17 15:19:39] 2025-12-17 20:19:32,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:19:39] 2025-12-17 20:19:32,669 | INFO     | [monitor] control thread has ended
[2025-12-17 15:19:39] 2025-12-17 20:19:37,687 | INFO     | all workflow threads have been joined
[2025-12-17 15:19:39] 2025-12-17 20:19:37,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:19:39] 2025-12-17 20:19:37,688 | INFO     | traces error code: 0
[2025-12-17 15:19:39] 2025-12-17 20:19:37,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:19:39] 2025-12-17 20:19:38,575 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:19:39] 2025-12-17 20:19:38,607 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:19:39] 2025-12-17 20:19:38,625 [wrapper] pilotpid: 4130930
[2025-12-17 15:19:39] 2025-12-17 20:19:38,628 [wrapper] Pilot exit status: 0
[2025-12-17 15:19:39] 2025-12-17 20:19:38,659 [wrapper] pandaids: 6932206718
[2025-12-17 15:19:39] 2025-12-17 20:19:38,784 [wrapper] cleanup supervisor_pilot 1537894 4130931
[2025-12-17 15:19:39] 2025-12-17 20:19:38,820 [wrapper] Test setup, not cleaning
[2025-12-17 15:19:39] 2025-12-17 20:19:38,849 [wrapper] apfmon messages muted
[2025-12-17 15:19:39] 2025-12-17 20:19:38,858 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:19:39] 2025-12-17 20:19:38,874 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:19:39]  *** Error codes and diagnostics ***
[2025-12-17 15:19:39]     "exeErrorCode": 0,
[2025-12-17 15:19:39]     "exeErrorDiag": "",
[2025-12-17 15:19:39]     "pilotErrorCode": 0,
[2025-12-17 15:19:39]     "pilotErrorDiag": "",
[2025-12-17 15:19:39]  *** Listing of results directory ***
[2025-12-17 15:19:39] total 734992
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas      5112 Dec 17 00:30 queuedata.json
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas    579449 Dec 17 00:30 pilot3.tar.gz
[2025-12-17 15:19:39] -rwx------. 1 boincer umatlas     36322 Dec 17 00:30 runpilot2-wrapper.sh
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas       100 Dec 17 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:19:39] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 06:23 run_atlas
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas       105 Dec 17 06:23 job.xml
[2025-12-17 15:19:39] -rw-r--r--. 2 boincer umatlas 361157893 Dec 17 06:23 EVNT.47928996._000001.pool.root.1
[2025-12-17 15:19:39] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 06:23 start_atlas.sh
[2025-12-17 15:19:39] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 06:23 shared
[2025-12-17 15:19:39] -rw-r--r--. 2 boincer umatlas    592390 Dec 17 06:23 input.tar.gz
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas         0 Dec 17 06:23 boinc_lockfile
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas      2555 Dec 17 06:23 pandaJob.out
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas        57 Dec 17 06:23 setup.sh.local
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas    987423 Dec 17 06:24 agis_schedconf.cvmfs.json
[2025-12-17 15:19:39] drwx------. 5 boincer umatlas      4096 Dec 17 06:24 pilot3
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas      6878 Dec 17 15:13 init_data.xml
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas 378393186 Dec 17 15:16 HITS.47928998._000019.pool.root.1
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas       533 Dec 17 15:16 boinc_task_state.xml
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas      1052 Dec 17 15:18 memory_monitor_summary.json
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas   1516240 Dec 17 15:18 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas    682112 Dec 17 15:18 log.47928998._000019.job.log.tgz.1
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas        95 Dec 17 15:18 pilot_heartbeat.json
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas      7831 Dec 17 15:18 heartbeat.json
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 15:19 boinc_mmap_file
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas      5010 Dec 17 15:19 pilotlog.txt
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas        29 Dec 17 15:19 wrapper_checkpoint.txt
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas   3900796 Dec 17 15:19 log.47928998._000019.job.log.1
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas       357 Dec 17 15:19 output.list
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas       620 Dec 17 15:19 runtime_log
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas   4597760 Dec 17 15:19 result.tar.gz
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 15:19 runtime_log.err
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas       659 Dec 17 15:19 pWBMDmoIzp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm50WKDmQqaxym.diag
[2025-12-17 15:19:39] -rw-r--r--. 1 boincer umatlas     21503 Dec 17 15:19 stderr.txt
[2025-12-17 15:19:39] HITS file was successfully produced:
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas 378393186 Dec 17 15:16 shared/HITS.pool.root.1
[2025-12-17 15:19:39]  *** Contents of shared directory: ***
[2025-12-17 15:19:39] total 727316
[2025-12-17 15:19:39] -rw-r--r--. 2 boincer umatlas 361157893 Dec 17 06:23 ATLAS.root_0
[2025-12-17 15:19:39] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 06:23 start_atlas.sh
[2025-12-17 15:19:39] -rw-r--r--. 2 boincer umatlas    592390 Dec 17 06:23 input.tar.gz
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas 378393186 Dec 17 15:16 HITS.pool.root.1
[2025-12-17 15:19:39] -rw-------. 1 boincer umatlas   4597760 Dec 17 15:19 result.tar.gz
15:19:41 (4126051): run_atlas exited; CPU time 108657.130809
15:19:41 (4126051): called boinc_finish(0)

</stderr_txt>
]]>

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