Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:28:13 (2890082): wrapper (7.7.26015): starting
18:28:13 (2890082): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 18:28:13] Arguments: --nthreads 4
[2025-12-17 18:28:13] Threads: 4
[2025-12-17 18:28:13] Checking for CVMFS
[2025-12-17 18:28:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 18:28:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 18:28:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 18:28:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 18:28:14] 2.13.1.0 9815 5621 86644 154115 1 57 9096446 10240000 911 130560 0 7230264 99.931 523948 428 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 18:28:14] CVMFS is ok
[2025-12-17 18:28:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 18:28:14] Checking for apptainer binary...
[2025-12-17 18:28:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 18:28:14] Running /usr/bin/apptainer --version
[2025-12-17 18:28:14] apptainer version 1.4.5
[2025-12-17 18:28:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 18:28:14] atlas6l1
[2025-12-17 18:28:14] apptainer works
[2025-12-17 18:28:14] Set ATHENA_PROC_NUMBER=4
[2025-12-17 18:28:14] Set ATHENA_CORE_NUMBER=4
[2025-12-17 18:28:15] Starting ATLAS job with PandaID=6931484554
[2025-12-17 18:28:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 20:45:41]  *** The last 200 lines of the pilot log: ***
[2025-12-17 20:45:41] 2025-12-17 19:44:57,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 20:45:41] 2025-12-17 19:44:57,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 20:45:41] 2025-12-17 19:44:57,871 | INFO     | fitting pss+swap vs Time
[2025-12-17 20:45:41] 2025-12-17 19:44:57,871 | INFO     | sum of square deviations: 746051197.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,872 | INFO     | sum of deviations: 25342701350.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,872 | INFO     | mean x: 1765996581.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,872 | INFO     | mean y: 2297590.7835820895
[2025-12-17 20:45:41] 2025-12-17 19:44:57,872 | INFO     | intersect: -59987049120.18183
[2025-12-17 20:45:41] 2025-12-17 19:44:57,872 | INFO     | chi2: 1.92168857651043
[2025-12-17 20:45:41] 2025-12-17 19:44:57,872 | INFO     | sum of square deviations: 665612480.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | sum of deviations: 24367414714.999996
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | mean x: 1765996429.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | mean y: 2295740.984496124
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | intersect: -64649087253.89571
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | chi2: 1.9237392108048061
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | current chi2=1.9237392108048061 (change=-0.1067100215634295 %)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | right removable region: 128
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | sum of square deviations: 665612480.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | sum of deviations: 1509872.0000002664
[2025-12-17 20:45:41] 2025-12-17 19:44:57,873 | INFO     | mean x: 1765996734.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | mean y: 2345208.7131782947
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | intersect: -1660769.3910160833
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | chi2: 0.010911009701492265
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | current chi2=0.010911009701492265 (change=99.4322175905679 %)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | sum of square deviations: 591173875.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | sum of deviations: 1443285681.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | mean x: 1765996886.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | mean y: 2342207.2741935486
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | intersect: -4309144018.290209
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | chi2: 0.00131446516453099
[2025-12-17 20:45:41] 2025-12-17 19:44:57,874 | INFO     | current chi2=0.00131446516453099 (change=87.95285495574974 %)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | sum of square deviations: 522502820.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | sum of deviations: 849238706.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | mean x: 1765997039.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | mean y: 2343516.319327731
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | intersect: -2867981738.9590864
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | chi2: 0.0006574382017748237
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | current chi2=0.0006574382017748237 (change=49.98435717317757 %)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,875 | INFO     | sum of square deviations: 459366752.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | sum of deviations: 695291785.9999999
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | mean x: 1765997191.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | mean y: 2343884.2807017546
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | intersect: -2670647434.0211573
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | chi2: 0.0006346620517580574
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | current chi2=0.0006346620517580574 (change=3.4643788504044504 %)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | left removable region: 40
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | sum of square deviations: 211285822.0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | sum of deviations: 321780459.49999994
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | mean x: 1765997618.5
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | mean y: 2345097.147727273
[2025-12-17 20:45:41] 2025-12-17 19:44:57,876 | INFO     | intersect: -2687203684.5818653
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | chi2: 0.0002937728475342469
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | current memory leak: 1.52 B/s (using 88 data points, chi2=0.00)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | ..............................
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . Timing measurements:
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . get job = 0 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . initial setup = 3 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . payload setup = 3 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . stage-in = 0 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . payload execution = 8165 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . stage-out = 0 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | . log creation = 0 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,877 | INFO     | ..............................
[2025-12-17 20:45:41] 2025-12-17 19:44:57,924 | INFO     | 
[2025-12-17 20:45:41] 2025-12-17 19:44:57,924 | INFO     | job summary report
[2025-12-17 20:45:41] 2025-12-17 19:44:57,924 | INFO     | --------------------------------------------------
[2025-12-17 20:45:41] 2025-12-17 19:44:57,924 | INFO     | PanDA job id: 6931484554
[2025-12-17 20:45:41] 2025-12-17 19:44:57,924 | INFO     | task id: 47905857
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | errors: (none)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | pilot state: finished 
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | transexitcode: 0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | exeerrorcode: 0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | exeerrordiag: 
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | exitcode: 0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | exitmsg: OK
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | cpuconsumptiontime: 31200 s
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | nevents: 400
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | neventsw: 0
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | pid: 2900426
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | pgrp: 2900426
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | corecount: 4
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | event service: False
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | sizes: {0: 2283922, 3: 2284184, 11: 2284212, 8172: 2321111, 8175: 2321111, 8179: 2321305}
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | --------------------------------------------------
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | 
[2025-12-17 20:45:41] 2025-12-17 19:44:57,925 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | job 6931484554 has completed (purged errors)
[2025-12-17 20:45:41] 2025-12-17 19:44:57,938 | INFO     | overall cleanup function is called
[2025-12-17 20:45:41] 2025-12-17 19:44:58,945 | INFO     | --- collectZombieJob: --- 10, [2900426]
[2025-12-17 20:45:41] 2025-12-17 19:44:58,945 | INFO     | zombie collector waiting for pid 2900426
[2025-12-17 20:45:41] 2025-12-17 19:44:58,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 20:45:41] 2025-12-17 19:44:58,945 | INFO     | collected zombie processes
[2025-12-17 20:45:41] 2025-12-17 19:44:58,945 | INFO     | will attempt to kill all subprocesses of pid=2900426
[2025-12-17 20:45:41] 2025-12-17 19:44:59,027 | INFO     | process IDs to be killed: [2900426] (in reverse order)
[2025-12-17 20:45:41] 2025-12-17 19:44:59,056 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 20:45:41] 2025-12-17 19:44:59,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 20:45:41] 2025-12-17 19:44:59,059 | INFO     | did not find any defunct processes belonging to 2900426
[2025-12-17 20:45:41] 2025-12-17 19:44:59,061 | INFO     | did not find any defunct processes belonging to 2900426
[2025-12-17 20:45:41] 2025-12-17 19:44:59,061 | INFO     | ready for new job
[2025-12-17 20:45:41] 2025-12-17 19:44:59,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 20:45:41] 2025-12-17 19:44:59,062 | INFO     | ***************************************
[2025-12-17 20:45:41] 2025-12-17 19:44:59,062 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 20:45:41] 2025-12-17 19:44:59,062 | INFO     | ***************************************
[2025-12-17 20:45:41] 2025-12-17 19:44:59,062 | INFO     | 
[2025-12-17 20:45:41] 2025-12-17 19:44:59,062 | INFO     | pilot is running in a VM
[2025-12-17 20:45:41] 2025-12-17 19:44:59,063 | INFO     | architecture information:
[2025-12-17 20:45:41] 2025-12-17 19:44:59,063 | INFO     | executing command: cat /etc/os-release
[2025-12-17 20:45:41] 2025-12-17 19:44:59,070 | INFO     | cat /etc/os-release:
[2025-12-17 20:45:41] NAME="CentOS Linux"
[2025-12-17 20:45:41] VERSION="7 (Core)"
[2025-12-17 20:45:41] ID="centos"
[2025-12-17 20:45:41] ID_LIKE="rhel fedora"
[2025-12-17 20:45:41] VERSION_ID="7"
[2025-12-17 20:45:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 20:45:41] ANSI_COLOR="0;31"
[2025-12-17 20:45:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 20:45:41] HOME_URL="https://www.centos.org/"
[2025-12-17 20:45:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 20:45:41] 
[2025-12-17 20:45:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 20:45:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 20:45:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 20:45:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 20:45:41] 
[2025-12-17 20:45:41] 2025-12-17 19:44:59,070 | INFO     | ***************************************
[2025-12-17 20:45:41] 2025-12-17 19:44:59,573 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2025-12-17 20:45:41] 2025-12-17 19:44:59,585 | INFO     | sufficient remaining disk space (158167203840 B)
[2025-12-17 20:45:41] 2025-12-17 19:44:59,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 20:45:41] 2025-12-17 19:44:59,585 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 20:45:41] 2025-12-17 19:44:59,585 | INFO     | update_server=False
[2025-12-17 20:45:41] 2025-12-17 19:44:59,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 20:45:41] 2025-12-17 19:44:59,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:45:41] 2025-12-17 19:44:59,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 20:45:41] 2025-12-17 19:44:59,586 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 20:45:41] 2025-12-17 19:44:59,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 20:45:41] 2025-12-17 19:44:59,587 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 20:45:41] 2025-12-17 19:44:59,587 | INFO     | aborting loop
[2025-12-17 20:45:41] 2025-12-17 19:44:59,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 20:45:41] 2025-12-17 19:44:59,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 20:45:41] 2025-12-17 19:44:59,625 | INFO     | all data control threads have been joined
[2025-12-17 20:45:41] 2025-12-17 19:44:59,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 20:45:41] 2025-12-17 19:45:00,045 | INFO     | all payload control threads have been joined
[2025-12-17 20:45:41] 2025-12-17 19:45:00,280 | INFO     | all job control threads have been joined
[2025-12-17 20:45:41] 2025-12-17 19:45:00,591 | INFO     | [job] retrieve thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:00,592 | INFO     | [job] queue monitor thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:00,592 | INFO     | [job] job monitor thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:00,631 | INFO     | [data] control thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:00,703 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,005 | INFO     | [data] copytool_in thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,050 | INFO     | [payload] control thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,112 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,145 | INFO     | [job] validate thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,286 | INFO     | [job] control thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,365 | INFO     | [payload] validate_post thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,587 | INFO     | [data] copytool_out thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,634 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:01,906 | INFO     | [payload] failed_post thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:03,966 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:10,130 | INFO     | job.realtimelogging is not enabled
[2025-12-17 20:45:41] 2025-12-17 19:45:11,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 20:45:41] 2025-12-17 19:45:36,062 | INFO     | [monitor] cgroup control has ended
[2025-12-17 20:45:41] 2025-12-17 19:45:36,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129362818819904)>', '<ExcThread(monitor, started 129362183575296)>']
[2025-12-17 20:45:41] 2025-12-17 19:45:36,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 20:45:41] 2025-12-17 19:45:36,765 | INFO     | [monitor] control thread has ended
[2025-12-17 20:45:41] 2025-12-17 19:45:41,284 | INFO     | all workflow threads have been joined
[2025-12-17 20:45:41] 2025-12-17 19:45:41,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 20:45:41] 2025-12-17 19:45:41,284 | INFO     | traces error code: 0
[2025-12-17 20:45:41] 2025-12-17 19:45:41,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 20:45:41] 2025-12-17 19:45:41,348 [wrapper] ==== pilot stdout END ====
[2025-12-17 20:45:41] 2025-12-17 19:45:41,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 20:45:41] 2025-12-17 19:45:41,353 [wrapper] pilotpid: 2893879
[2025-12-17 20:45:41] 2025-12-17 19:45:41,355 [wrapper] Pilot exit status: 0
[2025-12-17 20:45:41] 2025-12-17 19:45:41,372 [wrapper] pandaids: 6931484554
[2025-12-17 20:45:41] 2025-12-17 19:45:41,398 [wrapper] cleanup supervisor_pilot 2948758 2893880
[2025-12-17 20:45:41] 2025-12-17 19:45:41,400 [wrapper] Test setup, not cleaning
[2025-12-17 20:45:41] 2025-12-17 19:45:41,405 [wrapper] apfmon messages muted
[2025-12-17 20:45:41] 2025-12-17 19:45:41,408 [wrapper] ==== wrapper stdout END ====
[2025-12-17 20:45:41] 2025-12-17 19:45:41,413 [wrapper] ==== wrapper stderr END ====
[2025-12-17 20:45:41]  *** Error codes and diagnostics ***
[2025-12-17 20:45:41]     "exeErrorCode": 0,
[2025-12-17 20:45:41]     "exeErrorDiag": "",
[2025-12-17 20:45:41]     "pilotErrorCode": 0,
[2025-12-17 20:45:41]     "pilotErrorDiag": "",
[2025-12-17 20:45:41]  *** Listing of results directory ***
[2025-12-17 20:45:41] insgesamt 410700
[2025-12-17 20:45:41] -rwx------ 1 yeti boinc     36322 Dez 16 18:39 runpilot2-wrapper.sh
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc      5112 Dez 16 18:40 queuedata.json
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc    579449 Dez 16 18:41 pilot3.tar.gz
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc       100 Dez 17 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 20:45:41] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 18:28 run_atlas
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc       105 Dez 17 18:28 job.xml
[2025-12-17 20:45:41] -rw-r--r-- 2 yeti boinc    592373 Dez 17 18:28 input.tar.gz
[2025-12-17 20:45:41] -rw-r--r-- 2 yeti boinc 200899526 Dez 17 18:28 EVNT.47905855._000008.pool.root.1
[2025-12-17 20:45:41] -rw-r--r-- 2 yeti boinc     15847 Dez 17 18:28 start_atlas.sh
[2025-12-17 20:45:41] drwxrwx--x 2 yeti boinc      4096 Dez 17 18:28 shared
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc      6594 Dez 17 18:28 init_data.xml
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc         0 Dez 17 18:28 boinc_setup_complete
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc         0 Dez 17 18:28 boinc_lockfile
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc      2476 Dez 17 18:28 pandaJob.out
[2025-12-17 20:45:41] -rw------- 1 yeti boinc    987432 Dez 17 18:28 agis_schedconf.cvmfs.json
[2025-12-17 20:45:41] -rw------- 1 yeti boinc   1516240 Dez 17 18:28 agis_ddmendpoints.agis.ALL.json
[2025-12-17 20:45:41] drwx------ 5 yeti boinc      4096 Dez 17 18:28 pilot3
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc       529 Dez 17 20:44 boinc_task_state.xml
[2025-12-17 20:45:41] -rw------- 1 yeti boinc 212684020 Dez 17 20:44 HITS.47905857._000194.pool.root.1
[2025-12-17 20:45:41] -rw------- 1 yeti boinc        95 Dez 17 20:44 pilot_heartbeat.json
[2025-12-17 20:45:41] -rw------- 1 yeti boinc      1025 Dez 17 20:44 memory_monitor_summary.json
[2025-12-17 20:45:41] -rw------- 1 yeti boinc    324404 Dez 17 20:44 log.47905857._000194.job.log.tgz.1
[2025-12-17 20:45:41] -rw------- 1 yeti boinc      7760 Dez 17 20:44 heartbeat.json
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc      8192 Dez 17 20:45 boinc_mmap_file
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc        27 Dez 17 20:45 wrapper_checkpoint.txt
[2025-12-17 20:45:41] -rw------- 1 yeti boinc      4701 Dez 17 20:45 pilotlog.txt
[2025-12-17 20:45:41] -rw------- 1 yeti boinc   1206475 Dez 17 20:45 log.47905857._000194.job.log.1
[2025-12-17 20:45:41] -rw------- 1 yeti boinc       357 Dez 17 20:45 output.list
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc       620 Dez 17 20:45 runtime_log
[2025-12-17 20:45:41] -rw------- 1 yeti boinc   1546240 Dez 17 20:45 result.tar.gz
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc      9017 Dez 17 20:45 runtime_log.err
[2025-12-17 20:45:41] -rw------- 1 yeti boinc       640 Dez 17 20:45 3xfLDm5Bop8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm32VKDmzhkPPo.diag
[2025-12-17 20:45:41] -rw-r--r-- 1 yeti boinc     20507 Dez 17 20:45 stderr.txt
[2025-12-17 20:45:41] HITS file was successfully produced:
[2025-12-17 20:45:41] -rw------- 1 yeti boinc 212684020 Dez 17 20:44 shared/HITS.pool.root.1
[2025-12-17 20:45:41]  *** Contents of shared directory: ***
[2025-12-17 20:45:41] insgesamt 406008
[2025-12-17 20:45:41] -rw-r--r-- 2 yeti boinc    592373 Dez 17 18:28 input.tar.gz
[2025-12-17 20:45:41] -rw-r--r-- 2 yeti boinc 200899526 Dez 17 18:28 ATLAS.root_0
[2025-12-17 20:45:41] -rw-r--r-- 2 yeti boinc     15847 Dez 17 18:28 start_atlas.sh
[2025-12-17 20:45:41] -rw------- 1 yeti boinc 212684020 Dez 17 20:44 HITS.pool.root.1
[2025-12-17 20:45:41] -rw------- 1 yeti boinc   1546240 Dez 17 20:45 result.tar.gz
20:45:42 (2890082): run_atlas exited; CPU time 31302.804450
20:45:42 (2890082): called boinc_finish(0)

</stderr_txt>
]]>

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