Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:07:01 (22442): wrapper (7.7.26015): starting
13:07:01 (22442): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 13:07:01] Arguments: --nthreads 8
[2025-12-17 13:07:01] Threads: 8
[2025-12-17 13:07:01] Checking for CVMFS
[2025-12-17 13:07:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:07:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:07:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:07:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:07:01] 2.11.0.0 4316 33321 61368 154111 1 1 2966691 4096000 0 130560 1 728799 99.034 1476315 367 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-12-17 13:07:01] CVMFS is ok
[2025-12-17 13:07:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:07:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:07:01] Further information can be found at the LHC@home message board.
[2025-12-17 13:07:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:07:01] Checking for apptainer binary...
[2025-12-17 13:07:01] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-12-17 13:07:01] apptainer is not installed, using version from CVMFS
[2025-12-17 13:07:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:07:16] WARNING: Environment variable TMPDIR already has value [/tmp/job_10983807/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node286
[2025-12-17 13:07:16] apptainer works
[2025-12-17 13:07:16] Set ATHENA_PROC_NUMBER=8
[2025-12-17 13:07:16] Set ATHENA_CORE_NUMBER=8
[2025-12-17 13:07:16] Starting ATLAS job with PandaID=6929219717
[2025-12-17 13:07:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10983807/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 14:09:25]  *** The last 200 lines of the pilot log: ***
[2025-12-17 14:09:25]  status=None
[2025-12-17 14:09:25]  status_code=0
[2025-12-17 14:09:25]  storage_token=
[2025-12-17 14:09:25]  surl=/tmp/job_10983807/atlas/pilot/slots/0/PanDA_Pilot-6929219717/log.47886933._001728.job.log.tgz.1
[2025-12-17 14:09:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/c5/log.47886933._001728.job.log.tgz.1
[2025-12-17 14:09:25]  workdir=None
[2025-12-17 14:09:25] ]
[2025-12-17 14:09:25] 2025-12-17 13:08:48,693 | INFO     | transferring file log.47886933._001728.job.log.tgz.1 from /tmp/job_10983807/atlas/pilot/slots/0/PanDA_Pilot-6929219717/log.47886933._001728.job.log.tgz.1 to /tmp/j
[2025-12-17 14:09:25] 2025-12-17 13:08:48,693 | INFO     | executing command: /usr/bin/env mv /tmp/job_10983807/atlas/pilot/slots/0/PanDA_Pilot-6929219717/log.47886933._001728.job.log.tgz.1 /tmp/job_10983807/atlas/pilot/sl
[2025-12-17 14:09:25] 2025-12-17 13:08:48,701 | INFO     | adding to output.list: log.47886933._001728.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/c5/log.47886933._001728.job.log.tg
[2025-12-17 14:09:25] 2025-12-17 13:08:48,702 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 14:09:25] 2025-12-17 13:08:48,702 | INFO     | summary of transferred files:
[2025-12-17 14:09:25] 2025-12-17 13:08:48,702 | INFO     |  -- lfn=log.47886933._001728.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 14:09:25] 2025-12-17 13:08:48,702 | INFO     | stage-out finished correctly
[2025-12-17 14:09:25] 2025-12-17 13:08:49,170 | INFO     | time since job start (3635s) is within the limit (174528.0s)
[2025-12-17 14:09:25] 2025-12-17 13:08:49,170 | INFO     | 3641s have passed since pilot start - server update state is 'RUNNING'
[2025-12-17 14:09:25] 2025-12-17 13:08:50,884 | INFO     | monitor loop #290: job 0:6929219717 is in state 'finished'
[2025-12-17 14:09:25] 2025-12-17 13:08:50,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:09:25] 2025-12-17 13:08:51,175 | INFO     | time since job start (3637s) is within the limit (174528.0s)
[2025-12-17 14:09:25] 2025-12-17 13:08:51,198 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 14:09:25] 2025-12-17 13:08:53,181 | INFO     | time since job start (3639s) is within the limit (174528.0s)
[2025-12-17 14:09:25] 2025-12-17 13:08:53,387 | INFO     | monitor loop #291: job 0:6929219717 is in state 'finished'
[2025-12-17 14:09:25] 2025-12-17 13:08:53,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | job 6929219717 has state=finished
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | preparing for final server update for job 6929219717 in state='finished'
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | this job has now completed (state=finished)
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | log transfer has been attempted: DONE
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | job 6929219717 has finished - writing final server update
[2025-12-17 14:09:25] 2025-12-17 13:08:53,997 | INFO     | total number of processed events: 400 (read)
[2025-12-17 14:09:25] 2025-12-17 13:08:53,998 | INFO     | executing command: lscpu
[2025-12-17 14:09:25] 2025-12-17 13:08:54,029 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 14:09:25] 2025-12-17 13:08:55,186 | INFO     | time since job start (3641s) is within the limit (174528.0s)
[2025-12-17 14:09:25] 2025-12-17 13:08:55,890 | INFO     | monitor loop #292: job 0:6929219717 is in state 'finished'
[2025-12-17 14:09:25] 2025-12-17 13:08:55,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:09:25] 2025-12-17 13:08:56,308 | INFO     | PID=31821 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 14:09:25] 2025-12-17 13:08:56,309 | INFO     | .. there are 2 such processes running
[2025-12-17 14:09:25] 2025-12-17 13:08:57,290 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 14:09:25] 2025-12-17 13:08:57,306 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2396.77940625
[2025-12-17 14:09:25] 2025-12-17 13:08:57,309 | INFO     | time since job start (3643s) is within the limit (174528.0s)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,311 | INFO     | using path: /tmp/job_10983807/atlas/pilot/slots/0/PanDA_Pilot-6929219717/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,312 | INFO     | extracted standard info from prmon json
[2025-12-17 14:09:25] 2025-12-17 13:08:57,312 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 14:09:25] 2025-12-17 13:08:57,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 14:09:25] 2025-12-17 13:08:57,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 14:09:25] 2025-12-17 13:08:57,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | fitting pss+swap vs Time
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | sum of square deviations: 43584073.0
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | sum of deviations: 4388691634.5
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | mean x: 1765975220.5
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | mean y: 2523748.403846154
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | intersect: -177822083808.18323
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | chi2: 0.9012590493327386
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | current memory leak: 100.69 B/s (using 52 data points, chi2=0.90)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,313 | INFO     | could have reported an average CPU frequency of 2446 MHz (5 samples)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | ..............................
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . Timing measurements:
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . get job = 0 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . initial setup = 5 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . payload setup = 48 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . stage-in = 0 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . payload execution = 3569 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . stage-out = 0 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | . log creation = 0 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,314 | INFO     | ..............................
[2025-12-17 14:09:25] 2025-12-17 13:08:57,371 | INFO     | 
[2025-12-17 14:09:25] 2025-12-17 13:08:57,371 | INFO     | job summary report
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | --------------------------------------------------
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | PanDA job id: 6929219717
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | task id: 47886933
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | errors: (none)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | pilot state: finished 
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | transexitcode: 0
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | exeerrorcode: 0
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | exeerrordiag: 
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | exitcode: 0
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | exitmsg: OK
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | cpuconsumptiontime: 21241 s
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | nevents: 400
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | neventsw: 0
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | pid: 15283
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | pgrp: 15283
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | corecount: 8
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | event service: False
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | sizes: {0: 2284088, 3: 2284350, 11: 2284378, 3621: 2319064, 3624: 2319064, 3630: 2319290}
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | --------------------------------------------------
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | 
[2025-12-17 14:09:25] 2025-12-17 13:08:57,372 | INFO     | executing command: ls -lF /tmp/job_10983807/atlas/pilot/slots/0
[2025-12-17 14:09:25] 2025-12-17 13:08:57,380 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | job 6929219717 has completed (purged errors)
[2025-12-17 14:09:25] 2025-12-17 13:08:57,381 | INFO     | overall cleanup function is called
[2025-12-17 14:09:25] 2025-12-17 13:08:58,387 | INFO     | --- collectZombieJob: --- 10, [15283]
[2025-12-17 14:09:25] 2025-12-17 13:08:58,387 | INFO     | zombie collector waiting for pid 15283
[2025-12-17 14:09:25] 2025-12-17 13:08:58,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 14:09:25] 2025-12-17 13:08:58,387 | INFO     | collected zombie processes
[2025-12-17 14:09:25] 2025-12-17 13:08:58,387 | INFO     | will attempt to kill all subprocesses of pid=15283
[2025-12-17 14:09:25] 2025-12-17 13:08:58,477 | INFO     | process IDs to be killed: [15283] (in reverse order)
[2025-12-17 14:09:25] 2025-12-17 13:08:58,507 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 14:09:25] 2025-12-17 13:08:58,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 14:09:25] 2025-12-17 13:08:58,511 | INFO     | did not find any defunct processes belonging to 15283
[2025-12-17 14:09:25] 2025-12-17 13:08:58,513 | INFO     | did not find any defunct processes belonging to 15283
[2025-12-17 14:09:25] 2025-12-17 13:08:58,514 | INFO     | ready for new job
[2025-12-17 14:09:25] 2025-12-17 13:08:58,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 14:09:25] 2025-12-17 13:08:58,514 | INFO     | ***************************************
[2025-12-17 14:09:25] 2025-12-17 13:08:58,514 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 14:09:25] 2025-12-17 13:08:58,514 | INFO     | ***************************************
[2025-12-17 14:09:25] 2025-12-17 13:08:58,514 | INFO     | 
[2025-12-17 14:09:25] 2025-12-17 13:08:58,529 | INFO     | architecture information:
[2025-12-17 14:09:25] 2025-12-17 13:08:58,529 | INFO     | executing command: cat /etc/os-release
[2025-12-17 14:09:25] 2025-12-17 13:08:58,535 | INFO     | cat /etc/os-release:
[2025-12-17 14:09:25] NAME="CentOS Linux"
[2025-12-17 14:09:25] VERSION="7 (Core)"
[2025-12-17 14:09:25] ID="centos"
[2025-12-17 14:09:25] ID_LIKE="rhel fedora"
[2025-12-17 14:09:25] VERSION_ID="7"
[2025-12-17 14:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 14:09:25] ANSI_COLOR="0;31"
[2025-12-17 14:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 14:09:25] HOME_URL="https://www.centos.org/"
[2025-12-17 14:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 14:09:25] 
[2025-12-17 14:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 14:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 14:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 14:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 14:09:25] 
[2025-12-17 14:09:25] 2025-12-17 13:08:58,535 | INFO     | ***************************************
[2025-12-17 14:09:25] 2025-12-17 13:08:59,038 | INFO     | executing command: df -mP /tmp/job_10983807/atlas/pilot/slots/0
[2025-12-17 14:09:25] 2025-12-17 13:08:59,044 | INFO     | sufficient remaining disk space (227995025408 B)
[2025-12-17 14:09:25] 2025-12-17 13:08:59,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 14:09:25] 2025-12-17 13:08:59,044 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 14:09:25] 2025-12-17 13:08:59,044 | INFO     | update_server=False
[2025-12-17 14:09:25] 2025-12-17 13:08:59,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 14:09:25] 2025-12-17 13:08:59,045 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 14:09:25] 2025-12-17 13:08:59,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:09:25] 2025-12-17 13:08:59,045 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 14:09:25] 2025-12-17 13:08:59,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 14:09:25] 2025-12-17 13:08:59,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 14:09:25] 2025-12-17 13:08:59,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 14:09:25] 2025-12-17 13:08:59,296 | INFO     | all data control threads have been joined
[2025-12-17 14:09:25] 2025-12-17 13:08:59,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:09:25] 2025-12-17 13:08:59,399 | INFO     | aborting loop
[2025-12-17 14:09:25] 2025-12-17 13:08:59,798 | INFO     | all payload control threads have been joined
[2025-12-17 14:09:25] 2025-12-17 13:09:00,050 | INFO     | [job] retrieve thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,050 | INFO     | [job] queue monitor thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,247 | INFO     | [payload] failed_post thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,255 | INFO     | [job] validate thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,301 | INFO     | [data] control thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,404 | INFO     | [job] job monitor thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,497 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,500 | INFO     | all job control threads have been joined
[2025-12-17 14:09:25] 2025-12-17 13:09:00,569 | INFO     | [payload] validate_post thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,803 | INFO     | [payload] control thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:00,915 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:01,268 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:01,270 | INFO     | [data] copytool_out thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:01,411 | INFO     | [data] copytool_in thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:01,506 | INFO     | [job] control thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:01,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 14:09:25] 2025-12-17 13:09:05,756 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:09,954 | INFO     | job.realtimelogging is not enabled
[2025-12-17 14:09:25] 2025-12-17 13:09:10,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 14:09:25] 2025-12-17 13:09:19,217 | INFO     | [monitor] cgroup control has ended
[2025-12-17 14:09:25] 2025-12-17 13:09:20,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-12-17 14:09:25] 2025-12-17 13:09:20,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 14:09:25] 2025-12-17 13:09:20,150 | INFO     | [monitor] control thread has ended
[2025-12-17 14:09:25] 2025-12-17 13:09:25,109 | INFO     | all workflow threads have been joined
[2025-12-17 14:09:25] 2025-12-17 13:09:25,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 14:09:25] 2025-12-17 13:09:25,109 | INFO     | traces error code: 0
[2025-12-17 14:09:25] 2025-12-17 13:09:25,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 14:09:25] 2025-12-17 13:09:25,161 [wrapper] ==== pilot stdout END ====
[2025-12-17 14:09:25] 2025-12-17 13:09:25,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 14:09:25] 2025-12-17 13:09:25,163 [wrapper] pilotpid: 31821
[2025-12-17 14:09:25] 2025-12-17 13:09:25,164 [wrapper] Pilot exit status: 0
[2025-12-17 14:09:25] 2025-12-17 13:09:25,268 [wrapper] pandaids: 6929219717
[2025-12-17 14:09:25] 2025-12-17 13:09:25,288 [wrapper] cleanup supervisor_pilot 20539 31822
[2025-12-17 14:09:25] 2025-12-17 13:09:25,290 [wrapper] Test setup, not cleaning
[2025-12-17 14:09:25] 2025-12-17 13:09:25,291 [wrapper] apfmon messages muted
[2025-12-17 14:09:25] 2025-12-17 13:09:25,292 [wrapper] ==== wrapper stdout END ====
[2025-12-17 14:09:25] 2025-12-17 13:09:25,293 [wrapper] ==== wrapper stderr END ====
[2025-12-17 14:09:25]  *** Error codes and diagnostics ***
[2025-12-17 14:09:25]     "exeErrorCode": 0,
[2025-12-17 14:09:25]     "exeErrorDiag": "",
[2025-12-17 14:09:25]     "pilotErrorCode": 0,
[2025-12-17 14:09:25]     "pilotErrorDiag": "",
[2025-12-17 14:09:25]  *** Listing of results directory ***
[2025-12-17 14:09:25] total 341124
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user    579449 Dec 13 09:48 pilot3.tar.gz
[2025-12-17 14:09:25] -rwx------ 1 mf493845 unix-user     36322 Dec 13 09:48 runpilot2-wrapper.sh
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      5112 Dec 13 09:48 queuedata.json
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user       100 Dec 17 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 14:09:25] -rwxr-xr-x 1 mf493845 unix-user      7986 Dec 17 12:17 run_atlas
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user       105 Dec 17 12:17 job.xml
[2025-12-17 14:09:25] -rw-r--r-- 2 mf493845 unix-user     15847 Dec 17 13:07 start_atlas.sh
[2025-12-17 14:09:25] drwxrwx--x 2 mf493845 unix-user       100 Dec 17 13:07 shared
[2025-12-17 14:09:25] -rw-r--r-- 2 mf493845 unix-user    592390 Dec 17 13:07 input.tar.gz
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      6389 Dec 17 13:07 init_data.xml
[2025-12-17 14:09:25] -rw-r--r-- 2 mf493845 unix-user 194050656 Dec 17 13:07 EVNT.47886929._000069.pool.root.1
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user         0 Dec 17 13:07 boinc_setup_complete
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      8192 Dec 17 13:07 boinc_mmap_file
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user         0 Dec 17 13:07 boinc_lockfile
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      2511 Dec 17 13:07 pandaJob.out
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user    987423 Dec 17 13:08 agis_schedconf.cvmfs.json
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user   1516240 Dec 17 13:08 agis_ddmendpoints.agis.ALL.json
[2025-12-17 14:09:25] drwx------ 5 mf493845 unix-user       440 Dec 17 13:08 pilot3
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user 149609222 Dec 17 14:08 HITS.47886933._001728.pool.root.1
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user        95 Dec 17 14:08 pilot_heartbeat.json
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      1016 Dec 17 14:08 memory_monitor_summary.json
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user    322278 Dec 17 14:08 log.47886933._001728.job.log.tgz.1
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      7775 Dec 17 14:08 heartbeat.json
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      4638 Dec 17 14:09 pilotlog.txt
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user    563395 Dec 17 14:09 log.47886933._001728.job.log.1
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user       357 Dec 17 14:09 output.list
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user       620 Dec 17 14:09 runtime_log
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user    901120 Dec 17 14:09 result.tar.gz
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user      9220 Dec 17 14:09 runtime_log.err
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user       644 Dec 17 14:09 brOMDmkTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPHSKDmZV9Yen.diag
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user     22520 Dec 17 14:09 stderr.txt
[2025-12-17 14:09:25] HITS file was successfully produced:
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user 149609222 Dec 17 14:08 shared/HITS.pool.root.1
[2025-12-17 14:09:25]  *** Contents of shared directory: ***
[2025-12-17 14:09:25] total 337084
[2025-12-17 14:09:25] -rw-r--r-- 2 mf493845 unix-user     15847 Dec 17 13:07 start_atlas.sh
[2025-12-17 14:09:25] -rw-r--r-- 2 mf493845 unix-user    592390 Dec 17 13:07 input.tar.gz
[2025-12-17 14:09:25] -rw-r--r-- 2 mf493845 unix-user 194050656 Dec 17 13:07 ATLAS.root_0
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user 149609222 Dec 17 14:08 HITS.pool.root.1
[2025-12-17 14:09:25] -rw------- 1 mf493845 unix-user    901120 Dec 17 14:09 result.tar.gz
14:09:27 (22442): run_atlas exited; CPU time 21281.131126
14:09:27 (22442): called boinc_finish(0)

</stderr_txt>
]]>

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