Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:55 (19394): wrapper (7.7.26015): starting
04:52:55 (19394): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 04:52:55] Arguments: --nthreads 8
[2025-12-17 04:52:55] Threads: 8
[2025-12-17 04:52:55] Checking for CVMFS
[2025-12-17 04:52:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 04:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 04:52:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 04:52:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 04:52:55] 2.11.2.0 6509 147728 85308 154107 4 1 15235312 20275200 1 130560 0 47038550 99.895 7986687 29073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 04:52:55] CVMFS is ok
[2025-12-17 04:52:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 04:52:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 04:52:55] Further information can be found at the LHC@home message board.
[2025-12-17 04:52:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 04:52:55] Checking for apptainer binary...
[2025-12-17 04:52:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 04:52:55] Running /usr/bin/apptainer --version
[2025-12-17 04:52:55] apptainer version 1.3.2-1.el7
[2025-12-17 04:52:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 04:52:57] c-204-16.aglt2.org
[2025-12-17 04:52:57] apptainer works
[2025-12-17 04:52:57] Set ATHENA_PROC_NUMBER=8
[2025-12-17 04:52:57] Set ATHENA_CORE_NUMBER=8
[2025-12-17 04:52:57] Starting ATLAS job with PandaID=6931733134
[2025-12-17 04:52:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 07:09:34]  *** The last 200 lines of the pilot log: ***
[2025-12-17 07:09:34] 2025-12-17 12:08:47,923 | INFO     | job 6931733134 has finished - writing final server update
[2025-12-17 07:09:34] 2025-12-17 12:08:47,923 | INFO     | total number of processed events: 400 (read)
[2025-12-17 07:09:34] 2025-12-17 12:08:47,924 | INFO     | executing command: lscpu
[2025-12-17 07:09:34] 2025-12-17 12:08:47,952 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 07:09:34] 2025-12-17 12:08:49,047 | INFO     | monitor loop #599: job 0:6931733134 is in state 'finished'
[2025-12-17 07:09:34] 2025-12-17 12:08:49,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 07:09:34] 2025-12-17 12:08:49,781 | INFO     | time since job start (8134s) is within the limit (174528.0s)
[2025-12-17 07:09:34] 2025-12-17 12:08:51,551 | INFO     | monitor loop #600: job 0:6931733134 is in state 'finished'
[2025-12-17 07:09:34] 2025-12-17 12:08:51,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 07:09:34] 2025-12-17 12:08:51,787 | INFO     | time since job start (8136s) is within the limit (174528.0s)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,604 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 07:09:34] 2025-12-17 12:08:53,607 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.375
[2025-12-17 07:09:34] 2025-12-17 12:08:53,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931733134/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,613 | INFO     | extracted standard info from prmon json
[2025-12-17 07:09:34] 2025-12-17 12:08:53,613 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 07:09:34] 2025-12-17 12:08:53,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 07:09:34] 2025-12-17 12:08:53,614 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 07:09:34] 2025-12-17 12:08:53,614 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 07:09:34] 2025-12-17 12:08:53,618 | INFO     | fitting pss+swap vs Time
[2025-12-17 07:09:34] 2025-12-17 12:08:53,618 | INFO     | sum of square deviations: 729472282.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,619 | INFO     | sum of deviations: 8417209927.999998
[2025-12-17 07:09:34] 2025-12-17 12:08:53,619 | INFO     | mean x: 1765969252.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,620 | INFO     | mean y: 2473065.5187969925
[2025-12-17 07:09:34] 2025-12-17 12:08:53,620 | INFO     | intersect: -20374632805.75971
[2025-12-17 07:09:34] 2025-12-17 12:08:53,620 | INFO     | chi2: 1.492513148680025
[2025-12-17 07:09:34] 2025-12-17 12:08:53,621 | INFO     | sum of square deviations: 650252192.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,621 | INFO     | sum of deviations: 8079024006.5
[2025-12-17 07:09:34] 2025-12-17 12:08:53,622 | INFO     | mean x: 1765969099.5
[2025-12-17 07:09:34] 2025-12-17 12:08:53,622 | INFO     | mean y: 2472414.2265625
[2025-12-17 07:09:34] 2025-12-17 12:08:53,622 | INFO     | intersect: -21938717365.87292
[2025-12-17 07:09:34] 2025-12-17 12:08:53,622 | INFO     | chi2: 1.4944015506875437
[2025-12-17 07:09:34] 2025-12-17 12:08:53,623 | INFO     | current chi2=1.4944015506875437 (change=-0.1265249829918629 %)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,623 | INFO     | right removable region: 127
[2025-12-17 07:09:34] 2025-12-17 12:08:53,623 | INFO     | sum of square deviations: 650252192.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,624 | INFO     | sum of deviations: -10219904803.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,624 | INFO     | mean x: 1765969404.5
[2025-12-17 07:09:34] 2025-12-17 12:08:53,624 | INFO     | mean y: 2508278.515625
[2025-12-17 07:09:34] 2025-12-17 12:08:53,624 | INFO     | intersect: 27757953659.621853
[2025-12-17 07:09:34] 2025-12-17 12:08:53,625 | INFO     | chi2: 0.10070180001440175
[2025-12-17 07:09:34] 2025-12-17 12:08:53,625 | INFO     | current chi2=0.10070180001440175 (change=93.2528701604095 %)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,625 | INFO     | sum of square deviations: 576985702.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | sum of deviations: -7436137412.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | mean x: 1765969557.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | mean y: 2502396.0162601625
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | intersect: 22762151804.557007
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | chi2: 0.08372657359772245
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | current chi2=0.08372657359772245 (change=16.856924517984393 %)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,626 | INFO     | left removable region: 20
[2025-12-17 07:09:34] 2025-12-17 12:08:53,627 | INFO     | sum of square deviations: 379832238.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,627 | INFO     | sum of deviations: 962346064.9999998
[2025-12-17 07:09:34] 2025-12-17 12:08:53,627 | INFO     | mean x: 1765969679.0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,627 | INFO     | mean y: 2481976.523364486
[2025-12-17 07:09:34] 2025-12-17 12:08:53,628 | INFO     | intersect: -4471793246.7792
[2025-12-17 07:09:34] 2025-12-17 12:08:53,628 | INFO     | chi2: 0.0001300718532485939
[2025-12-17 07:09:34] 2025-12-17 12:08:53,628 | INFO     | current memory leak: 2.53 B/s (using 107 data points, chi2=0.00)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,628 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | ..............................
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . Timing measurements:
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . get job = 0 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . initial setup = 2 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . payload setup = 8 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . stage-in = 0 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . payload execution = 8099 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . stage-out = 1 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,629 | INFO     | . log creation = 0 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,630 | INFO     | ..............................
[2025-12-17 07:09:34] 2025-12-17 12:08:53,718 | INFO     | 
[2025-12-17 07:09:34] 2025-12-17 12:08:53,718 | INFO     | job summary report
[2025-12-17 07:09:34] 2025-12-17 12:08:53,719 | INFO     | --------------------------------------------------
[2025-12-17 07:09:34] 2025-12-17 12:08:53,719 | INFO     | PanDA job id: 6931733134
[2025-12-17 07:09:34] 2025-12-17 12:08:53,719 | INFO     | task id: 47886933
[2025-12-17 07:09:34] 2025-12-17 12:08:53,719 | INFO     | errors: (none)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 07:09:34] 2025-12-17 12:08:53,720 | INFO     | pilot state: finished 
[2025-12-17 07:09:34] 2025-12-17 12:08:53,720 | INFO     | transexitcode: 0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,720 | INFO     | exeerrorcode: 0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,720 | INFO     | exeerrordiag: 
[2025-12-17 07:09:34] 2025-12-17 12:08:53,720 | INFO     | exitcode: 0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,720 | INFO     | exitmsg: OK
[2025-12-17 07:09:34] 2025-12-17 12:08:53,721 | INFO     | cpuconsumptiontime: 60363 s
[2025-12-17 07:09:34] 2025-12-17 12:08:53,721 | INFO     | nevents: 400
[2025-12-17 07:09:34] 2025-12-17 12:08:53,721 | INFO     | neventsw: 0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,721 | INFO     | pid: 29502
[2025-12-17 07:09:34] 2025-12-17 12:08:53,721 | INFO     | pgrp: 29502
[2025-12-17 07:09:34] 2025-12-17 12:08:53,721 | INFO     | corecount: 8
[2025-12-17 07:09:34] 2025-12-17 12:08:53,722 | INFO     | event service: False
[2025-12-17 07:09:34] 2025-12-17 12:08:53,722 | INFO     | sizes: {0: 2283795, 1: 2283994, 7: 2284256, 11: 2284284, 8112: 2312016, 8113: 2321198, 8122: 2321336}
[2025-12-17 07:09:34] 2025-12-17 12:08:53,722 | INFO     | --------------------------------------------------
[2025-12-17 07:09:34] 2025-12-17 12:08:53,722 | INFO     | 
[2025-12-17 07:09:34] 2025-12-17 12:08:53,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 07:09:34] 2025-12-17 12:08:53,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 07:09:34] 2025-12-17 12:08:53,753 | INFO     | job 6931733134 has completed (purged errors)
[2025-12-17 07:09:34] 2025-12-17 12:08:53,753 | INFO     | overall cleanup function is called
[2025-12-17 07:09:34] 2025-12-17 12:08:54,761 | INFO     | --- collectZombieJob: --- 10, [29502]
[2025-12-17 07:09:34] 2025-12-17 12:08:54,762 | INFO     | zombie collector waiting for pid 29502
[2025-12-17 07:09:34] 2025-12-17 12:08:54,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 07:09:34] 2025-12-17 12:08:54,762 | INFO     | collected zombie processes
[2025-12-17 07:09:34] 2025-12-17 12:08:54,762 | INFO     | will attempt to kill all subprocesses of pid=29502
[2025-12-17 07:09:34] 2025-12-17 12:08:54,852 | INFO     | process IDs to be killed: [29502] (in reverse order)
[2025-12-17 07:09:34] 2025-12-17 12:08:54,908 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 07:09:34] 2025-12-17 12:08:54,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 07:09:34] 2025-12-17 12:08:54,913 | INFO     | did not find any defunct processes belonging to 29502
[2025-12-17 07:09:34] 2025-12-17 12:08:54,916 | INFO     | did not find any defunct processes belonging to 29502
[2025-12-17 07:09:34] 2025-12-17 12:08:54,916 | INFO     | ready for new job
[2025-12-17 07:09:34] 2025-12-17 12:08:54,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 07:09:34] 2025-12-17 12:08:54,918 | INFO     | ***************************************
[2025-12-17 07:09:34] 2025-12-17 12:08:54,918 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 07:09:34] 2025-12-17 12:08:54,918 | INFO     | ***************************************
[2025-12-17 07:09:34] 2025-12-17 12:08:54,919 | INFO     | 
[2025-12-17 07:09:34] 2025-12-17 12:08:54,919 | INFO     | architecture information:
[2025-12-17 07:09:34] 2025-12-17 12:08:54,920 | INFO     | executing command: cat /etc/os-release
[2025-12-17 07:09:34] 2025-12-17 12:08:54,938 | INFO     | cat /etc/os-release:
[2025-12-17 07:09:34] NAME="CentOS Linux"
[2025-12-17 07:09:34] VERSION="7 (Core)"
[2025-12-17 07:09:34] ID="centos"
[2025-12-17 07:09:34] ID_LIKE="rhel fedora"
[2025-12-17 07:09:34] VERSION_ID="7"
[2025-12-17 07:09:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 07:09:34] ANSI_COLOR="0;31"
[2025-12-17 07:09:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 07:09:34] HOME_URL="https://www.centos.org/"
[2025-12-17 07:09:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 07:09:34] 
[2025-12-17 07:09:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 07:09:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 07:09:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 07:09:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 07:09:34] 
[2025-12-17 07:09:34] 2025-12-17 12:08:54,938 | INFO     | ***************************************
[2025-12-17 07:09:34] 2025-12-17 12:08:55,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 07:09:34] 2025-12-17 12:08:55,461 | INFO     | sufficient remaining disk space (18800967680 B)
[2025-12-17 07:09:34] 2025-12-17 12:08:55,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 07:09:34] 2025-12-17 12:08:55,462 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 07:09:34] 2025-12-17 12:08:55,462 | INFO     | update_server=False
[2025-12-17 07:09:34] 2025-12-17 12:08:55,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 07:09:34] 2025-12-17 12:08:55,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:09:34] 2025-12-17 12:08:55,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 07:09:34] 2025-12-17 12:08:55,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:09:34] 2025-12-17 12:08:55,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 07:09:34] 2025-12-17 12:08:55,465 | INFO     | aborting loop
[2025-12-17 07:09:34] 2025-12-17 12:08:55,803 | INFO     | all data control threads have been joined
[2025-12-17 07:09:34] 2025-12-17 12:08:56,432 | INFO     | all payload control threads have been joined
[2025-12-17 07:09:34] 2025-12-17 12:08:56,468 | INFO     | [job] retrieve thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:56,469 | INFO     | [job] job monitor thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:56,470 | INFO     | [job] queue monitor thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:56,642 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:56,811 | INFO     | [data] control thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:56,956 | INFO     | [job] validate thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,088 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,121 | INFO     | all job control threads have been joined
[2025-12-17 07:09:34] 2025-12-17 12:08:57,130 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,131 | INFO     | [data] copytool_in thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,438 | INFO     | [payload] control thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,466 | INFO     | [data] copytool_out thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,539 | INFO     | [payload] validate_post thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:57,660 | INFO     | [payload] failed_post thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:58,126 | INFO     | [job] control thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:08:59,468 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 07:09:34] 2025-12-17 12:09:25,006 | INFO     | PID=23117 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 07:09:34] 2025-12-17 12:09:25,008 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 07:09:34] 2025-12-17 12:09:25,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 07:09:34] 2025-12-17 12:09:25,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 07:09:34] 2025-12-17 12:09:27,685 | INFO     | [monitor] cgroup control has ended
[2025-12-17 07:09:34] 2025-12-17 12:09:29,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811530835776)>', '<ExcThread(monitor, started 139810505221888)>']
[2025-12-17 07:09:34] 2025-12-17 12:09:30,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 07:09:34] 2025-12-17 12:09:30,034 | INFO     | [monitor] control thread has ended
[2025-12-17 07:09:34] 2025-12-17 12:09:34,445 | INFO     | all workflow threads have been joined
[2025-12-17 07:09:34] 2025-12-17 12:09:34,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 07:09:34] 2025-12-17 12:09:34,446 | INFO     | traces error code: 0
[2025-12-17 07:09:34] 2025-12-17 12:09:34,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 07:09:34] 2025-12-17 12:09:34,566 [wrapper] ==== pilot stdout END ====
[2025-12-17 07:09:34] 2025-12-17 12:09:34,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 07:09:34] 2025-12-17 12:09:34,575 [wrapper] pilotpid: 23117
[2025-12-17 07:09:34] 2025-12-17 12:09:34,579 [wrapper] Pilot exit status: 0
[2025-12-17 07:09:34] 2025-12-17 12:09:34,597 [wrapper] pandaids: 6931733134
[2025-12-17 07:09:34] 2025-12-17 12:09:34,639 [wrapper] cleanup supervisor_pilot 26535 23118
[2025-12-17 07:09:34] 2025-12-17 12:09:34,644 [wrapper] Test setup, not cleaning
[2025-12-17 07:09:34] 2025-12-17 12:09:34,649 [wrapper] apfmon messages muted
[2025-12-17 07:09:34] 2025-12-17 12:09:34,654 [wrapper] ==== wrapper stdout END ====
[2025-12-17 07:09:34] 2025-12-17 12:09:34,659 [wrapper] ==== wrapper stderr END ====
[2025-12-17 07:09:34]  *** Error codes and diagnostics ***
[2025-12-17 07:09:34]     "exeErrorCode": 0,
[2025-12-17 07:09:34]     "exeErrorDiag": "",
[2025-12-17 07:09:34]     "pilotErrorCode": 0,
[2025-12-17 07:09:34]     "pilotErrorDiag": "",
[2025-12-17 07:09:34]  *** Listing of results directory ***
[2025-12-17 07:09:34] total 338968
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 07:09:34] -rwx------ 1 boincer umatlas     36322 Dec 16 17:40 runpilot2-wrapper.sh
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 17:43 queuedata.json
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas       100 Dec 17 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 07:09:34] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 04:52 run_atlas
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas       105 Dec 17 04:52 job.xml
[2025-12-17 07:09:34] -rw-r--r-- 2 boincer umatlas 191632066 Dec 17 04:52 EVNT.47886929._000293.pool.root.1
[2025-12-17 07:09:34] drwxrwx--x 2 boincer umatlas      4096 Dec 17 04:52 shared
[2025-12-17 07:09:34] -rw-r--r-- 2 boincer umatlas    592400 Dec 17 04:52 input.tar.gz
[2025-12-17 07:09:34] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 04:52 start_atlas.sh
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas         0 Dec 17 04:52 boinc_lockfile
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas      2514 Dec 17 04:52 pandaJob.out
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas        57 Dec 17 04:52 setup.sh.local
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas    987431 Dec 17 04:53 agis_schedconf.cvmfs.json
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas   1516240 Dec 17 04:53 agis_ddmendpoints.agis.ALL.json
[2025-12-17 07:09:34] drwx------ 5 boincer umatlas      4096 Dec 17 04:53 pilot3
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas      5910 Dec 17 07:03 init_data.xml
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas 148539960 Dec 17 07:08 HITS.47886933._007645.pool.root.1
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas       529 Dec 17 07:08 boinc_task_state.xml
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas      1049 Dec 17 07:08 memory_monitor_summary.json
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas    365625 Dec 17 07:08 log.47886933._007645.job.log.tgz.1
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas      7838 Dec 17 07:08 heartbeat.json
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas        27 Dec 17 07:09 wrapper_checkpoint.txt
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 07:09 boinc_mmap_file
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas        95 Dec 17 07:09 pilot_heartbeat.json
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas      4746 Dec 17 07:09 pilotlog.txt
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas   1139431 Dec 17 07:09 log.47886933._007645.job.log.1
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas       357 Dec 17 07:09 output.list
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas       620 Dec 17 07:09 runtime_log
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas   1525760 Dec 17 07:09 result.tar.gz
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas      9342 Dec 17 07:09 runtime_log.err
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas       661 Dec 17 07:09 czPODmCtsp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiSWKDmkov8bm.diag
[2025-12-17 07:09:34] -rw-r--r-- 1 boincer umatlas     21314 Dec 17 07:09 stderr.txt
[2025-12-17 07:09:34] HITS file was successfully produced:
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas 148539960 Dec 17 07:08 shared/HITS.pool.root.1
[2025-12-17 07:09:34]  *** Contents of shared directory: ***
[2025-12-17 07:09:34] total 334296
[2025-12-17 07:09:34] -rw-r--r-- 2 boincer umatlas 191632066 Dec 17 04:52 ATLAS.root_0
[2025-12-17 07:09:34] -rw-r--r-- 2 boincer umatlas    592400 Dec 17 04:52 input.tar.gz
[2025-12-17 07:09:34] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 04:52 start_atlas.sh
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas 148539960 Dec 17 07:08 HITS.pool.root.1
[2025-12-17 07:09:34] -rw------- 1 boincer umatlas   1525760 Dec 17 07:09 result.tar.gz
07:09:36 (19394): run_atlas exited; CPU time 60325.347554
07:09:36 (19394): called boinc_finish(0)

</stderr_txt>
]]>

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