Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:48 (1901811): wrapper (7.7.26015): starting
05:20:48 (1901811): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 05:20:48] Arguments: --nthreads 8
[2025-12-17 05:20:48] Threads: 8
[2025-12-17 05:20:48] Checking for CVMFS
[2025-12-17 05:20:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 05:20:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 05:20:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 05:20:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 05:20:48] 2.13.3.0 11235 58467 226312 154109 2 142 31976545 32935937 36092 16776704 0 545509466 99.560 594199352 18203 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 05:20:48] CVMFS is ok
[2025-12-17 05:20:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 05:20:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 05:20:48] Further information can be found at the LHC@home message board.
[2025-12-17 05:20:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 05:20:48] Checking for apptainer binary...
[2025-12-17 05:20:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 05:20:48] Running /usr/bin/apptainer --version
[2025-12-17 05:20:48] apptainer version 1.4.5-2.el9
[2025-12-17 05:20:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 05:20:48] c7-2-37.aglt2.org
[2025-12-17 05:20:48] apptainer works
[2025-12-17 05:20:48] Set ATHENA_PROC_NUMBER=8
[2025-12-17 05:20:48] Set ATHENA_CORE_NUMBER=8
[2025-12-17 05:20:48] Starting ATLAS job with PandaID=6931732476
[2025-12-17 05:20:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:51:20]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:51:20] 2025-12-17 11:50:01,428 | INFO     | transferring file log.47886933._007469.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6931732476/log.47886933._007469.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-17 06:51:20] 2025-12-17 11:50:01,428 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6931732476/log.47886933._007469.job.log.tgz.1 /tmp/boinchome/slots/5/log.47886933._007469.job
[2025-12-17 06:51:20] 2025-12-17 11:50:01,557 | INFO     | adding to output.list: log.47886933._007469.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/40/log.47886933._007469.job.log.tg
[2025-12-17 06:51:20] 2025-12-17 11:50:01,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 06:51:20] 2025-12-17 11:50:01,579 | INFO     | summary of transferred files:
[2025-12-17 06:51:20] 2025-12-17 11:50:01,579 | INFO     |  -- lfn=log.47886933._007469.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 06:51:20] 2025-12-17 11:50:01,579 | INFO     | stage-out finished correctly
[2025-12-17 06:51:20] 2025-12-17 11:50:02,105 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 06:51:20] 2025-12-17 11:50:02,131 | INFO     | time since job start (5338s) is within the limit (174528.0s)
[2025-12-17 06:51:20] 2025-12-17 11:50:04,139 | WARNING  | process 1914800 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 06:51:20] 2025-12-17 11:50:04,139 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6931732476/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:51:20] 2025-12-17 11:50:04,151 | INFO     | time since job start (5340s) is within the limit (174528.0s)
[2025-12-17 06:51:20] 2025-12-17 11:50:04,925 | INFO     | job 6931732476 has state=finished
[2025-12-17 06:51:20] 2025-12-17 11:50:04,926 | INFO     | preparing for final server update for job 6931732476 in state='finished'
[2025-12-17 06:51:20] 2025-12-17 11:50:04,926 | INFO     | this job has now completed (state=finished)
[2025-12-17 06:51:20] 2025-12-17 11:50:04,926 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 06:51:20] 2025-12-17 11:50:04,926 | INFO     | log transfer has been attempted: DONE
[2025-12-17 06:51:20] 2025-12-17 11:50:04,926 | INFO     | job 6931732476 has finished - writing final server update
[2025-12-17 06:51:20] 2025-12-17 11:50:04,926 | INFO     | total number of processed events: 400 (read)
[2025-12-17 06:51:20] 2025-12-17 11:50:04,928 | INFO     | executing command: lscpu
[2025-12-17 06:51:20] 2025-12-17 11:50:05,001 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 06:51:20] 2025-12-17 11:50:05,155 | INFO     | number of running child processes to parent process 1914800: 1
[2025-12-17 06:51:20] 2025-12-17 11:50:05,155 | INFO     | maximum number of monitored processes: 6
[2025-12-17 06:51:20] 2025-12-17 11:50:06,162 | INFO     | time since job start (5342s) is within the limit (174528.0s)
[2025-12-17 06:51:20] 2025-12-17 11:50:07,660 | INFO     | monitor loop #355: job 0:6931732476 is in state 'finished'
[2025-12-17 06:51:20] 2025-12-17 11:50:07,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:51:20] 2025-12-17 11:50:08,169 | INFO     | time since job start (5344s) is within the limit (174528.0s)
[2025-12-17 06:51:20] 2025-12-17 11:50:10,199 | INFO     | monitor loop #356: job 0:6931732476 is in state 'finished'
[2025-12-17 06:51:20] 2025-12-17 11:50:10,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:51:20] 2025-12-17 11:50:12,593 | INFO     | PID=1906287 has CPU usage=15.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 06:51:20] 2025-12-17 11:50:12,593 | INFO     | .. there are 48 such processes running
[2025-12-17 06:51:20] 2025-12-17 11:50:12,713 | INFO     | monitor loop #357: job 0:6931732476 is in state 'finished'
[2025-12-17 06:51:20] 2025-12-17 11:50:12,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:51:20] 2025-12-17 11:50:13,594 | INFO     | time since job start (5349s) is within the limit (174528.0s)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,218 | INFO     | monitor loop #358: job 0:6931732476 is in state 'finished'
[2025-12-17 06:51:20] 2025-12-17 11:50:15,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,462 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 06:51:20] 2025-12-17 11:50:15,473 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3280.534031250001
[2025-12-17 06:51:20] 2025-12-17 11:50:15,490 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6931732476/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,490 | INFO     | extracted standard info from prmon json
[2025-12-17 06:51:20] 2025-12-17 11:50:15,490 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:51:20] 2025-12-17 11:50:15,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:51:20] 2025-12-17 11:50:15,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:51:20] 2025-12-17 11:50:15,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:51:20] 2025-12-17 11:50:15,492 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:51:20] 2025-12-17 11:50:15,493 | INFO     | sum of square deviations: 158735847.98750016
[2025-12-17 06:51:20] 2025-12-17 11:50:15,493 | INFO     | sum of deviations: -8173682004.7874975
[2025-12-17 06:51:20] 2025-12-17 11:50:15,493 | INFO     | mean x: 1765969608.5125
[2025-12-17 06:51:20] 2025-12-17 11:50:15,493 | INFO     | mean y: 2592625.2875
[2025-12-17 06:51:20] 2025-12-17 11:50:15,493 | INFO     | intersect: 90936519605.89558
[2025-12-17 06:51:20] 2025-12-17 11:50:15,493 | INFO     | chi2: 0.03546104131897079
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | current memory leak: -51.49 B/s (using 80 data points, chi2=0.04)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | could have reported an average CPU frequency of 3305 MHz (6 samples)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | ..............................
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . Timing measurements:
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . get job = 0 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . initial setup = 2 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . payload setup = 7 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . stage-in = 0 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . payload execution = 5308 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,494 | INFO     | . stage-out = 0 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,495 | INFO     | . log creation = 0 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,495 | INFO     | ..............................
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | 
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | job summary report
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | --------------------------------------------------
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | PanDA job id: 6931732476
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | task id: 47886933
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | errors: (none)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | pilot state: finished 
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | transexitcode: 0
[2025-12-17 06:51:20] 2025-12-17 11:50:15,571 | INFO     | exeerrorcode: 0
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | exeerrordiag: 
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | exitcode: 0
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | exitmsg: OK
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | cpuconsumptiontime: 32030 s
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | nevents: 400
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | neventsw: 0
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | pid: 1914800
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | pgrp: 1914800
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | corecount: 8
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | event service: False
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | sizes: {0: 2283738, 1: 2283993, 7: 2284255, 12: 2284283, 5320: 2310788, 5321: 2319970, 5335: 2320108}
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | --------------------------------------------------
[2025-12-17 06:51:20] 2025-12-17 11:50:15,572 | INFO     | 
[2025-12-17 06:51:20] 2025-12-17 11:50:15,573 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-17 06:51:20] 2025-12-17 11:50:15,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | job 6931732476 has completed (purged errors)
[2025-12-17 06:51:20] 2025-12-17 11:50:15,592 | INFO     | overall cleanup function is called
[2025-12-17 06:51:20] 2025-12-17 11:50:16,600 | INFO     | --- collectZombieJob: --- 10, [1914800]
[2025-12-17 06:51:20] 2025-12-17 11:50:16,600 | INFO     | zombie collector waiting for pid 1914800
[2025-12-17 06:51:20] 2025-12-17 11:50:16,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:51:20] 2025-12-17 11:50:16,600 | INFO     | collected zombie processes
[2025-12-17 06:51:20] 2025-12-17 11:50:16,600 | INFO     | will attempt to kill all subprocesses of pid=1914800
[2025-12-17 06:51:20] 2025-12-17 11:50:17,426 | INFO     | process IDs to be killed: [1914800] (in reverse order)
[2025-12-17 06:51:20] 2025-12-17 11:50:17,624 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:51:20] 2025-12-17 11:50:17,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:51:20] 2025-12-17 11:50:17,649 | INFO     | did not find any defunct processes belonging to 1914800
[2025-12-17 06:51:20] 2025-12-17 11:50:17,714 | INFO     | did not find any defunct processes belonging to 1914800
[2025-12-17 06:51:20] 2025-12-17 11:50:17,714 | INFO     | ready for new job
[2025-12-17 06:51:20] 2025-12-17 11:50:17,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:51:20] 2025-12-17 11:50:17,717 | INFO     | ***************************************
[2025-12-17 06:51:20] 2025-12-17 11:50:17,717 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:51:20] 2025-12-17 11:50:17,717 | INFO     | ***************************************
[2025-12-17 06:51:20] 2025-12-17 11:50:17,719 | INFO     | 
[2025-12-17 06:51:20] 2025-12-17 11:50:17,727 | INFO     | architecture information:
[2025-12-17 06:51:20] 2025-12-17 11:50:17,728 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:51:20] 2025-12-17 11:50:17,745 | INFO     | cat /etc/os-release:
[2025-12-17 06:51:20] NAME="CentOS Linux"
[2025-12-17 06:51:20] VERSION="7 (Core)"
[2025-12-17 06:51:20] ID="centos"
[2025-12-17 06:51:20] ID_LIKE="rhel fedora"
[2025-12-17 06:51:20] VERSION_ID="7"
[2025-12-17 06:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:51:20] ANSI_COLOR="0;31"
[2025-12-17 06:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:51:20] HOME_URL="https://www.centos.org/"
[2025-12-17 06:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:51:20] 
[2025-12-17 06:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:51:20] 
[2025-12-17 06:51:20] 2025-12-17 11:50:17,745 | INFO     | ***************************************
[2025-12-17 06:51:20] 2025-12-17 11:50:18,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-17 06:51:20] 2025-12-17 11:50:18,266 | INFO     | sufficient remaining disk space (74023174144 B)
[2025-12-17 06:51:20] 2025-12-17 11:50:18,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:51:20] 2025-12-17 11:50:18,267 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:51:20] 2025-12-17 11:50:18,267 | INFO     | update_server=False
[2025-12-17 06:51:20] 2025-12-17 11:50:18,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:51:20] 2025-12-17 11:50:18,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:51:20] 2025-12-17 11:50:18,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:51:20] 2025-12-17 11:50:18,437 | INFO     | all payload control threads have been joined
[2025-12-17 06:51:20] 2025-12-17 11:50:18,639 | INFO     | all data control threads have been joined
[2025-12-17 06:51:20] 2025-12-17 11:50:18,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:51:20] 2025-12-17 11:50:18,744 | INFO     | aborting loop
[2025-12-17 06:51:20] 2025-12-17 11:50:19,053 | INFO     | all job control threads have been joined
[2025-12-17 06:51:20] 2025-12-17 11:50:19,273 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:19,383 | INFO     | [job] validate thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:19,442 | INFO     | [payload] control thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:19,450 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:19,637 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:19,645 | INFO     | [data] control thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:19,746 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:20,033 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:20,059 | INFO     | [job] control thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:20,165 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:20,276 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:20,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:51:20] 2025-12-17 11:50:20,596 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:20,869 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:21,595 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:22,274 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:28,865 | INFO     | job.realtimelogging is not enabled
[2025-12-17 06:51:20] 2025-12-17 11:50:29,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:51:20] 2025-12-17 11:50:47,348 | INFO     | PID=1906287 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 06:51:20] 2025-12-17 11:50:47,348 | INFO     | .. there are 48 such processes running
[2025-12-17 06:51:20] 2025-12-17 11:50:47,349 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:51:20] 2025-12-17 11:50:47,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:51:20] 2025-12-17 11:50:47,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:51:20] 2025-12-17 11:51:01,161 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-12-17 06:51:20] 2025-12-17 11:51:13,002 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:51:20] 2025-12-17 11:51:14,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166713734976)>', '<ExcThread(monitor, started 140165813085952)>']
[2025-12-17 06:51:20] 2025-12-17 11:51:15,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:51:20] 2025-12-17 11:51:15,507 | INFO     | [monitor] control thread has ended
[2025-12-17 06:51:20] 2025-12-17 11:51:19,833 | INFO     | all workflow threads have been joined
[2025-12-17 06:51:20] 2025-12-17 11:51:19,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:51:20] 2025-12-17 11:51:19,833 | INFO     | traces error code: 0
[2025-12-17 06:51:20] 2025-12-17 11:51:19,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:51:20] 2025-12-17 11:51:19,953 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:51:20] 2025-12-17 11:51:19,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:51:20] 2025-12-17 11:51:19,960 [wrapper] pilotpid: 1906287
[2025-12-17 06:51:20] 2025-12-17 11:51:19,966 [wrapper] Pilot exit status: 0
[2025-12-17 06:51:20] 2025-12-17 11:51:20,003 [wrapper] pandaids: 6931732476
[2025-12-17 06:51:20] 2025-12-17 11:51:20,158 [wrapper] cleanup supervisor_pilot 2467857 1906288
[2025-12-17 06:51:20] 2025-12-17 11:51:20,162 [wrapper] Test setup, not cleaning
[2025-12-17 06:51:20] 2025-12-17 11:51:20,173 [wrapper] apfmon messages muted
[2025-12-17 06:51:20] 2025-12-17 11:51:20,176 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:51:20] 2025-12-17 11:51:20,180 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:51:20]  *** Error codes and diagnostics ***
[2025-12-17 06:51:20]     "exeErrorCode": 0,
[2025-12-17 06:51:20]     "exeErrorDiag": "",
[2025-12-17 06:51:20]     "pilotErrorCode": 0,
[2025-12-17 06:51:20]     "pilotErrorDiag": "",
[2025-12-17 06:51:20]  *** Listing of results directory ***
[2025-12-17 06:51:20] total 336096
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 06:51:20] -rwx------. 1 boincer umatlas     36322 Dec 16 17:37 runpilot2-wrapper.sh
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 17:38 queuedata.json
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas       100 Dec 17 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:51:20] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 05:20 run_atlas
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas       105 Dec 17 05:20 job.xml
[2025-12-17 06:51:20] -rw-r--r--. 2 boincer umatlas 194143636 Dec 17 05:20 EVNT.47886929._000286.pool.root.1
[2025-12-17 06:51:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 05:20 start_atlas.sh
[2025-12-17 06:51:20] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 05:20 shared
[2025-12-17 06:51:20] -rw-r--r--. 2 boincer umatlas    592406 Dec 17 05:20 input.tar.gz
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas         0 Dec 17 05:20 boinc_lockfile
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas      2513 Dec 17 05:20 pandaJob.out
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas        57 Dec 17 05:20 setup.sh.local
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas    987423 Dec 17 05:21 agis_schedconf.cvmfs.json
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas   1516240 Dec 17 05:21 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:51:20] drwx------. 5 boincer umatlas      4096 Dec 17 05:21 pilot3
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas      6944 Dec 17 06:48 init_data.xml
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas 143963917 Dec 17 06:49 HITS.47886933._007469.pool.root.1
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas       529 Dec 17 06:49 boinc_task_state.xml
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas      1036 Dec 17 06:49 memory_monitor_summary.json
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas    322020 Dec 17 06:50 log.47886933._007469.job.log.tgz.1
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas      7771 Dec 17 06:50 heartbeat.json
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas        95 Dec 17 06:50 pilot_heartbeat.json
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 06:51 boinc_mmap_file
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas      4896 Dec 17 06:51 pilotlog.txt
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas    748789 Dec 17 06:51 log.47886933._007469.job.log.1
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas       357 Dec 17 06:51 output.list
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas       620 Dec 17 06:51 runtime_log
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas   1085440 Dec 17 06:51 result.tar.gz
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas       651 Dec 17 06:51 sNnMDm3qsp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2MWKDmccVeKo.diag
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas      9337 Dec 17 06:51 runtime_log.err
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas        27 Dec 17 06:51 wrapper_checkpoint.txt
[2025-12-17 06:51:20] -rw-r--r--. 1 boincer umatlas     22591 Dec 17 06:51 stderr.txt
[2025-12-17 06:51:20] HITS file was successfully produced:
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas 143963917 Dec 17 06:49 shared/HITS.pool.root.1
[2025-12-17 06:51:20]  *** Contents of shared directory: ***
[2025-12-17 06:51:20] total 331852
[2025-12-17 06:51:20] -rw-r--r--. 2 boincer umatlas 194143636 Dec 17 05:20 ATLAS.root_0
[2025-12-17 06:51:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 05:20 start_atlas.sh
[2025-12-17 06:51:20] -rw-r--r--. 2 boincer umatlas    592406 Dec 17 05:20 input.tar.gz
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas 143963917 Dec 17 06:49 HITS.pool.root.1
[2025-12-17 06:51:20] -rw-------. 1 boincer umatlas   1085440 Dec 17 06:51 result.tar.gz
06:51:22 (1901811): run_atlas exited; CPU time 32285.609697
06:51:22 (1901811): called boinc_finish(0)

</stderr_txt>
]]>

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