Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:26 (3907694): wrapper (7.7.26015): starting
05:20:26 (3907694): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 05:20:26] Arguments: --nthreads 8
[2025-12-17 05:20:26] Threads: 8
[2025-12-17 05:20:26] Checking for CVMFS
[2025-12-17 05:20:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 05:20:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 05:20:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 05:20:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 05:20:28] 2.13.3.0 11830 60028 384516 154109 2 59 28985409 32935936 25952 16776704 0 322265545 99.496 413157951 32662 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 05:20:28] CVMFS is ok
[2025-12-17 05:20:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 05:20:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 05:20:29] Further information can be found at the LHC@home message board.
[2025-12-17 05:20:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 05:20:29] Checking for apptainer binary...
[2025-12-17 05:20:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 05:20:29] Running /usr/bin/apptainer --version
[2025-12-17 05:20:29] apptainer version 1.4.5-2.el9
[2025-12-17 05:20:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 05:20:29] c6-8-25-1.aglt2.org
[2025-12-17 05:20:29] apptainer works
[2025-12-17 05:20:29] Set ATHENA_PROC_NUMBER=8
[2025-12-17 05:20:29] Set ATHENA_CORE_NUMBER=8
[2025-12-17 05:20:29] Starting ATLAS job with PandaID=6931733485
[2025-12-17 05:20:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 09:58:22]  *** The last 200 lines of the pilot log: ***
[2025-12-17 09:58:23] 2025-12-17 14:57:40,837 | INFO     | monitor loop #984: job 0:6931733485 is in state 'finished'
[2025-12-17 09:58:23] 2025-12-17 14:57:40,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 09:58:23] 2025-12-17 14:57:42,500 | INFO     | time since job start (16565s) is within the limit (174528.0s)
[2025-12-17 09:58:23] 2025-12-17 14:57:43,357 | INFO     | monitor loop #985: job 0:6931733485 is in state 'finished'
[2025-12-17 09:58:23] 2025-12-17 14:57:43,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 09:58:23] 2025-12-17 14:57:44,518 | INFO     | time since job start (16567s) is within the limit (174528.0s)
[2025-12-17 09:58:23] 2025-12-17 14:57:45,862 | INFO     | monitor loop #986: job 0:6931733485 is in state 'finished'
[2025-12-17 09:58:23] 2025-12-17 14:57:45,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,148 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 09:58:23] 2025-12-17 14:57:46,159 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2540.97634375
[2025-12-17 09:58:23] 2025-12-17 14:57:46,197 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931733485/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,198 | INFO     | extracted standard info from prmon json
[2025-12-17 09:58:23] 2025-12-17 14:57:46,198 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 09:58:23] 2025-12-17 14:57:46,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 09:58:23] 2025-12-17 14:57:46,199 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 09:58:23] 2025-12-17 14:57:46,199 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 09:58:23] 2025-12-17 14:57:46,204 | INFO     | fitting pss+swap vs Time
[2025-12-17 09:58:23] 2025-12-17 14:57:46,205 | INFO     | sum of square deviations: 6035764624.208206
[2025-12-17 09:58:23] 2025-12-17 14:57:46,207 | INFO     | sum of deviations: -9151078231.472141
[2025-12-17 09:58:23] 2025-12-17 14:57:46,207 | INFO     | mean x: 1765975214.2973979
[2025-12-17 09:58:23] 2025-12-17 14:57:46,207 | INFO     | mean y: 2487400.468401487
[2025-12-17 09:58:23] 2025-12-17 14:57:46,207 | INFO     | intersect: 2679957173.901833
[2025-12-17 09:58:23] 2025-12-17 14:57:46,207 | INFO     | chi2: 3.2951171772783674
[2025-12-17 09:58:23] 2025-12-17 14:57:46,208 | INFO     | sum of square deviations: 5705438643.757544
[2025-12-17 09:58:23] 2025-12-17 14:57:46,210 | INFO     | sum of deviations: 9301481430.393942
[2025-12-17 09:58:23] 2025-12-17 14:57:46,210 | INFO     | mean x: 1765975061.8030303
[2025-12-17 09:58:23] 2025-12-17 14:57:46,210 | INFO     | mean y: 2495793.257575758
[2025-12-17 09:58:23] 2025-12-17 14:57:46,210 | INFO     | intersect: -2876543886.1668906
[2025-12-17 09:58:23] 2025-12-17 14:57:46,211 | INFO     | chi2: 2.5013356439661742
[2025-12-17 09:58:23] 2025-12-17 14:57:46,211 | INFO     | current chi2=2.5013356439661742 (change=24.0896299162212 %)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,211 | INFO     | right removable region: 263
[2025-12-17 09:58:23] 2025-12-17 14:57:46,211 | INFO     | sum of square deviations: 5705438579.541654
[2025-12-17 09:58:23] 2025-12-17 14:57:46,213 | INFO     | sum of deviations: -67479365505.208305
[2025-12-17 09:58:23] 2025-12-17 14:57:46,214 | INFO     | mean x: 1765975366.7916667
[2025-12-17 09:58:23] 2025-12-17 14:57:46,214 | INFO     | mean y: 2514190.268939394
[2025-12-17 09:58:23] 2025-12-17 14:57:46,214 | INFO     | intersect: 20889058771.825447
[2025-12-17 09:58:23] 2025-12-17 14:57:46,214 | INFO     | chi2: 1.1516555517735274
[2025-12-17 09:58:23] 2025-12-17 14:57:46,214 | INFO     | current chi2=1.1516555517735274 (change=65.04963284113775 %)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,215 | INFO     | sum of square deviations: 5387359873.698838
[2025-12-17 09:58:23] 2025-12-17 14:57:46,217 | INFO     | sum of deviations: -74598222469.53667
[2025-12-17 09:58:23] 2025-12-17 14:57:46,217 | INFO     | mean x: 1765975519.2934363
[2025-12-17 09:58:23] 2025-12-17 14:57:46,217 | INFO     | mean y: 2517575.6254826253
[2025-12-17 09:58:23] 2025-12-17 14:57:46,217 | INFO     | intersect: 24455800399.213535
[2025-12-17 09:58:23] 2025-12-17 14:57:46,217 | INFO     | chi2: 1.0847863178888961
[2025-12-17 09:58:23] 2025-12-17 14:57:46,218 | INFO     | current chi2=1.0847863178888961 (change=5.80635709884383 %)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,218 | INFO     | left removable region: 20
[2025-12-17 09:58:23] 2025-12-17 14:57:46,218 | INFO     | sum of square deviations: 4449352989.465038
[2025-12-17 09:58:23] 2025-12-17 14:57:46,220 | INFO     | sum of deviations: -53081405288.83539
[2025-12-17 09:58:23] 2025-12-17 14:57:46,220 | INFO     | mean x: 1765975641.3045268
[2025-12-17 09:58:23] 2025-12-17 14:57:46,220 | INFO     | mean y: 2525801.2139917696
[2025-12-17 09:58:23] 2025-12-17 14:57:46,220 | INFO     | intersect: 21070862920.84705
[2025-12-17 09:58:23] 2025-12-17 14:57:46,220 | INFO     | chi2: 0.2558240807156501
[2025-12-17 09:58:23] 2025-12-17 14:57:46,221 | INFO     | current memory leak: -11.93 B/s (using 243 data points, chi2=0.26)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,221 | INFO     | could have reported an average CPU frequency of 2542 MHz (13 samples)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,221 | INFO     | ..............................
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . Timing measurements:
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . get job = 0 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . initial setup = 5 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . payload setup = 45 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . stage-in = 0 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . payload execution = 16419 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . stage-out = 4 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | . log creation = 0 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,222 | INFO     | ..............................
[2025-12-17 09:58:23] 2025-12-17 14:57:46,534 | INFO     | time since job start (16569s) is within the limit (174528.0s)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,848 | INFO     | 
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | job summary report
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | --------------------------------------------------
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | PanDA job id: 6931733485
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | task id: 47886831
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | errors: (none)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | pilot state: finished 
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | transexitcode: 0
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | exeerrorcode: 0
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | exeerrordiag: 
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | exitcode: 0
[2025-12-17 09:58:23] 2025-12-17 14:57:46,849 | INFO     | exitmsg: OK
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | cpuconsumptiontime: 47029 s
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | nevents: 400
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | neventsw: 0
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | pid: 3922604
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | pgrp: 3922604
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | corecount: 8
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | event service: False
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | sizes: {0: 2283766, 1: 2283850, 2: 2284049, 14: 2284049, 24: 2284077, 32: 2284367, 36: 2284523, 16469: 2315833, 16470: 2315832, 16476: 2324886, 16478: 2324942, 165
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | --------------------------------------------------
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | 
[2025-12-17 09:58:23] 2025-12-17 14:57:46,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 09:58:23] 2025-12-17 14:57:46,973 | INFO     | job 6931733485 has completed (purged errors)
[2025-12-17 09:58:23] 2025-12-17 14:57:46,973 | INFO     | overall cleanup function is called
[2025-12-17 09:58:23] 2025-12-17 14:57:47,986 | INFO     | --- collectZombieJob: --- 10, [3922604]
[2025-12-17 09:58:23] 2025-12-17 14:57:47,986 | INFO     | zombie collector waiting for pid 3922604
[2025-12-17 09:58:23] 2025-12-17 14:57:47,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 09:58:23] 2025-12-17 14:57:47,987 | INFO     | collected zombie processes
[2025-12-17 09:58:23] 2025-12-17 14:57:47,987 | INFO     | will attempt to kill all subprocesses of pid=3922604
[2025-12-17 09:58:23] 2025-12-17 14:57:50,595 | INFO     | process IDs to be killed: [3922604] (in reverse order)
[2025-12-17 09:58:23] 2025-12-17 14:57:51,213 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 09:58:23] 2025-12-17 14:57:51,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 09:58:23] 2025-12-17 14:57:51,243 | INFO     | did not find any defunct processes belonging to 3922604
[2025-12-17 09:58:23] 2025-12-17 14:57:51,284 | INFO     | did not find any defunct processes belonging to 3922604
[2025-12-17 09:58:23] 2025-12-17 14:57:51,285 | INFO     | ready for new job
[2025-12-17 09:58:23] 2025-12-17 14:57:51,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 09:58:23] 2025-12-17 14:57:51,292 | INFO     | ***************************************
[2025-12-17 09:58:23] 2025-12-17 14:57:51,292 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 09:58:23] 2025-12-17 14:57:51,292 | INFO     | ***************************************
[2025-12-17 09:58:23] 2025-12-17 14:57:51,294 | INFO     | 
[2025-12-17 09:58:23] 2025-12-17 14:57:51,308 | INFO     | architecture information:
[2025-12-17 09:58:23] 2025-12-17 14:57:51,309 | INFO     | executing command: cat /etc/os-release
[2025-12-17 09:58:23] 2025-12-17 14:57:51,364 | INFO     | cat /etc/os-release:
[2025-12-17 09:58:23] NAME="CentOS Linux"
[2025-12-17 09:58:23] VERSION="7 (Core)"
[2025-12-17 09:58:23] ID="centos"
[2025-12-17 09:58:23] ID_LIKE="rhel fedora"
[2025-12-17 09:58:23] VERSION_ID="7"
[2025-12-17 09:58:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 09:58:23] ANSI_COLOR="0;31"
[2025-12-17 09:58:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 09:58:23] HOME_URL="https://www.centos.org/"
[2025-12-17 09:58:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 09:58:23] 
[2025-12-17 09:58:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 09:58:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 09:58:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 09:58:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 09:58:23] 
[2025-12-17 09:58:23] 2025-12-17 14:57:51,365 | INFO     | ***************************************
[2025-12-17 09:58:23] 2025-12-17 14:57:51,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 09:58:23] 2025-12-17 14:57:51,894 | INFO     | sufficient remaining disk space (73897345024 B)
[2025-12-17 09:58:23] 2025-12-17 14:57:51,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 09:58:23] 2025-12-17 14:57:51,894 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 09:58:23] 2025-12-17 14:57:51,894 | INFO     | update_server=False
[2025-12-17 09:58:23] 2025-12-17 14:57:51,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 09:58:23] 2025-12-17 14:57:51,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 09:58:23] 2025-12-17 14:57:51,913 | INFO     | all payload control threads have been joined
[2025-12-17 09:58:23] 2025-12-17 14:57:51,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 09:58:23] 2025-12-17 14:57:51,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 09:58:23] 2025-12-17 14:57:51,995 | INFO     | aborting loop
[2025-12-17 09:58:23] 2025-12-17 14:57:52,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 09:58:23] 2025-12-17 14:57:52,541 | INFO     | all data control threads have been joined
[2025-12-17 09:58:23] 2025-12-17 14:57:52,683 | INFO     | all job control threads have been joined
[2025-12-17 09:58:23] 2025-12-17 14:57:52,902 | INFO     | [job] retrieve thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:52,903 | INFO     | [job] queue monitor thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:52,919 | INFO     | [payload] control thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:52,992 | INFO     | [job] validate thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:52,993 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,000 | INFO     | [job] job monitor thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,135 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,191 | INFO     | [payload] validate_post thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,510 | INFO     | [data] copytool_in thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,551 | INFO     | [data] control thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:53,691 | INFO     | [job] control thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:54,136 | INFO     | [data] copytool_out thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:54,296 | INFO     | [payload] failed_post thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:54,398 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:57:55,930 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 09:58:23] 2025-12-17 14:58:06,282 | INFO     | [monitor] cgroup control has ended
[2025-12-17 09:58:23] 2025-12-17 14:58:07,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594346350400)>', '<ExcThread(monitor, started 140593187510016)>']
[2025-12-17 09:58:23] 2025-12-17 14:58:12,589 | INFO     | all workflow threads have been joined
[2025-12-17 09:58:23] 2025-12-17 14:58:12,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 09:58:23] 2025-12-17 14:58:12,590 | INFO     | traces error code: 0
[2025-12-17 09:58:23] 2025-12-17 14:58:12,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 09:58:23] 2025-12-17 14:58:22,015 | INFO     | PID=3913393 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 09:58:23] 2025-12-17 14:58:22,020 | INFO     | .. there are 24 such processes running
[2025-12-17 09:58:23] 2025-12-17 14:58:22,021 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 09:58:23] 2025-12-17 14:58:22,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 09:58:23] 2025-12-17 14:58:22,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 09:58:23] 2025-12-17 14:58:22,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 09:58:23] 2025-12-17 14:58:22,021 | INFO     | [monitor] control thread has ended
[2025-12-17 09:58:23] 2025-12-17 14:58:22,256 [wrapper] ==== pilot stdout END ====
[2025-12-17 09:58:23] 2025-12-17 14:58:22,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 09:58:23] 2025-12-17 14:58:22,312 [wrapper] pilotpid: 3913393
[2025-12-17 09:58:23] 2025-12-17 14:58:22,323 [wrapper] Pilot exit status: 0
[2025-12-17 09:58:23] 2025-12-17 14:58:22,387 [wrapper] pandaids: 6931733485
[2025-12-17 09:58:23] 2025-12-17 14:58:22,640 [wrapper] cleanup supervisor_pilot  550826 3913394
[2025-12-17 09:58:23] 2025-12-17 14:58:22,658 [wrapper] Test setup, not cleaning
[2025-12-17 09:58:23] 2025-12-17 14:58:22,675 [wrapper] apfmon messages muted
[2025-12-17 09:58:23] 2025-12-17 14:58:22,688 [wrapper] ==== wrapper stdout END ====
[2025-12-17 09:58:23] 2025-12-17 14:58:22,706 [wrapper] ==== wrapper stderr END ====
[2025-12-17 09:58:23]  *** Error codes and diagnostics ***
[2025-12-17 09:58:23]     "exeErrorCode": 0,
[2025-12-17 09:58:23]     "exeErrorDiag": "",
[2025-12-17 09:58:23]     "pilotErrorCode": 0,
[2025-12-17 09:58:23]     "pilotErrorDiag": "",
[2025-12-17 09:58:23]  *** Listing of results directory ***
[2025-12-17 09:58:23] total 337524
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 09:58:23] -rwx------. 1 boincer umatlas     36322 Dec 16 17:37 runpilot2-wrapper.sh
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 17:38 queuedata.json
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas       100 Dec 17 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 09:58:23] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 05:20 run_atlas
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas       105 Dec 17 05:20 job.xml
[2025-12-17 09:58:23] -rw-r--r--. 2 boincer umatlas 192248998 Dec 17 05:20 EVNT.47886829._000629.pool.root.1
[2025-12-17 09:58:23] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 05:20 start_atlas.sh
[2025-12-17 09:58:23] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 05:20 shared
[2025-12-17 09:58:23] -rw-r--r--. 2 boincer umatlas    592411 Dec 17 05:20 input.tar.gz
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas         0 Dec 17 05:20 boinc_lockfile
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 05:20 pandaJob.out
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas        57 Dec 17 05:20 setup.sh.local
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas    987423 Dec 17 05:21 agis_schedconf.cvmfs.json
[2025-12-17 09:58:23] drwx------. 5 boincer umatlas      4096 Dec 17 05:21 pilot3
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas      6877 Dec 17 09:46 init_data.xml
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas 144429082 Dec 17 09:56 HITS.47886831._016238.pool.root.1
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas       531 Dec 17 09:56 boinc_task_state.xml
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas      1041 Dec 17 09:57 memory_monitor_summary.json
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas   1516240 Dec 17 09:57 agis_ddmendpoints.agis.ALL.json
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas    479005 Dec 17 09:57 log.47886831._016238.job.log.tgz.1
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas        95 Dec 17 09:57 pilot_heartbeat.json
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas      7826 Dec 17 09:57 heartbeat.json
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 09:58 boinc_mmap_file
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas        28 Dec 17 09:58 wrapper_checkpoint.txt
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas       823 Dec 17 09:58 pilotlog.txt
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas   2036849 Dec 17 09:58 log.47886831._016238.job.log.1
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas       357 Dec 17 09:58 output.list
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas       620 Dec 17 09:58 runtime_log
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas   2539520 Dec 17 09:58 result.tar.gz
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 09:58 runtime_log.err
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas       656 Dec 17 09:58 4ctKDmtqsp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhsaKDmDfNRMn.diag
[2025-12-17 09:58:23] -rw-r--r--. 1 boincer umatlas     21451 Dec 17 09:58 stderr.txt
[2025-12-17 09:58:23] HITS file was successfully produced:
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas 144429082 Dec 17 09:56 shared/HITS.pool.root.1
[2025-12-17 09:58:23]  *** Contents of shared directory: ***
[2025-12-17 09:58:23] total 331872
[2025-12-17 09:58:23] -rw-r--r--. 2 boincer umatlas 192248998 Dec 17 05:20 ATLAS.root_0
[2025-12-17 09:58:23] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 05:20 start_atlas.sh
[2025-12-17 09:58:23] -rw-r--r--. 2 boincer umatlas    592411 Dec 17 05:20 input.tar.gz
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas 144429082 Dec 17 09:56 HITS.pool.root.1
[2025-12-17 09:58:23] -rw-------. 1 boincer umatlas   2539520 Dec 17 09:58 result.tar.gz
09:58:24 (3907694): run_atlas exited; CPU time 47752.314937
09:58:24 (3907694): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN