Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:47:55 (2853629): wrapper (7.7.26015): starting
16:47:55 (2853629): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 16:47:55] Arguments: --nthreads 4
[2025-12-17 16:47:55] Threads: 4
[2025-12-17 16:47:55] Checking for CVMFS
[2025-12-17 16:47:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 16:47:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 16:47:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 16:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 16:47:55] 2.13.1.0 9815 5521 85704 154112 1 188 9079612 10240001 911 130560 0 7141752 99.930 521261 429 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-17 16:47:55] CVMFS is ok
[2025-12-17 16:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 16:47:55] Checking for apptainer binary...
[2025-12-17 16:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 16:47:55] Running /usr/bin/apptainer --version
[2025-12-17 16:47:55] apptainer version 1.4.5
[2025-12-17 16:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 16:47:55] atlas6l1
[2025-12-17 16:47:55] apptainer works
[2025-12-17 16:47:56] Set ATHENA_PROC_NUMBER=4
[2025-12-17 16:47:56] Set ATHENA_CORE_NUMBER=4
[2025-12-17 16:47:56] Starting ATLAS job with PandaID=6931736898
[2025-12-17 16:47:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 18:54:42]  *** The last 200 lines of the pilot log: ***
[2025-12-17 18:54:42] 2025-12-17 17:54:07,374 | INFO     | job 6931736898 has finished - writing final server update
[2025-12-17 18:54:42] 2025-12-17 17:54:07,374 | INFO     | total number of processed events: 400 (read)
[2025-12-17 18:54:42] 2025-12-17 17:54:07,376 | INFO     | executing command: lscpu
[2025-12-17 18:54:42] 2025-12-17 17:54:07,392 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 18:54:42] 2025-12-17 17:54:09,037 | INFO     | time since job start (7562s) is within the limit (174528.0s)
[2025-12-17 18:54:42] 2025-12-17 17:54:09,074 | INFO     | monitor loop #576: job 0:6931736898 is in state 'finished'
[2025-12-17 18:54:42] 2025-12-17 17:54:09,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,314 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 18:54:42] 2025-12-17 17:54:10,315 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2025-12-17 18:54:42] 2025-12-17 17:54:10,317 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6931736898/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,318 | INFO     | extracted standard info from prmon json
[2025-12-17 18:54:42] 2025-12-17 17:54:10,318 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 18:54:42] 2025-12-17 17:54:10,318 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 18:54:42] 2025-12-17 17:54:10,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 18:54:42] 2025-12-17 17:54:10,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 18:54:42] 2025-12-17 17:54:10,320 | INFO     | fitting pss+swap vs Time
[2025-12-17 18:54:42] 2025-12-17 17:54:10,320 | INFO     | sum of square deviations: 591216228.3467727
[2025-12-17 18:54:42] 2025-12-17 17:54:10,321 | INFO     | sum of deviations: 4985011864.596781
[2025-12-17 18:54:42] 2025-12-17 17:54:10,321 | INFO     | mean x: 1765990258.5725806
[2025-12-17 18:54:42] 2025-12-17 17:54:10,321 | INFO     | mean y: 2428152.8225806453
[2025-12-17 18:54:42] 2025-12-17 17:54:10,321 | INFO     | intersect: -14888033187.124004
[2025-12-17 18:54:42] 2025-12-17 17:54:10,322 | INFO     | chi2: 1.907320887281096
[2025-12-17 18:54:42] 2025-12-17 17:54:10,322 | INFO     | sum of square deviations: 522547918.319327
[2025-12-17 18:54:42] 2025-12-17 17:54:10,322 | INFO     | sum of deviations: 6780460507.512605
[2025-12-17 18:54:42] 2025-12-17 17:54:10,322 | INFO     | mean x: 1765990106.0756302
[2025-12-17 18:54:42] 2025-12-17 17:54:10,322 | INFO     | mean y: 2432142.831932773
[2025-12-17 18:54:42] 2025-12-17 17:54:10,323 | INFO     | intersect: -22912645596.672913
[2025-12-17 18:54:42] 2025-12-17 17:54:10,323 | INFO     | chi2: 1.9044280579688113
[2025-12-17 18:54:42] 2025-12-17 17:54:10,323 | INFO     | current chi2=1.9044280579688113 (change=0.15166977573493126 %)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,323 | INFO     | right removable region: 118
[2025-12-17 18:54:42] 2025-12-17 17:54:10,323 | INFO     | sum of square deviations: 522542428.319327
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | sum of deviations: -16888920750.77311
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | mean x: 1765990411.0756302
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | mean y: 2475998.974789916
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | intersect: 57080467149.30297
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | chi2: 0.0847091691097825
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | current chi2=0.0847091691097825 (change=95.55873530905771 %)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,324 | INFO     | sum of square deviations: 459403615.78947383
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | sum of deviations: -16685356131.578947
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | mean x: 1765990563.5789473
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | mean y: 2475494.6754385964
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | intersect: 64142548549.35882
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | chi2: 0.07469002727479532
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | current chi2=0.07469002727479532 (change=11.82769461709918 %)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | left removable region: 20
[2025-12-17 18:54:42] 2025-12-17 17:54:10,325 | INFO     | sum of square deviations: 291852231.6734688
[2025-12-17 18:54:42] 2025-12-17 17:54:10,326 | INFO     | sum of deviations: -12538495682.959187
[2025-12-17 18:54:42] 2025-12-17 17:54:10,326 | INFO     | mean x: 1765990685.5918367
[2025-12-17 18:54:42] 2025-12-17 17:54:10,326 | INFO     | mean y: 2479728.551020408
[2025-12-17 18:54:42] 2025-12-17 17:54:10,326 | INFO     | intersect: 75872609144.63628
[2025-12-17 18:54:42] 2025-12-17 17:54:10,326 | INFO     | chi2: 0.06222361151832804
[2025-12-17 18:54:42] 2025-12-17 17:54:10,326 | INFO     | current memory leak: -42.96 B/s (using 98 data points, chi2=0.06)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | ..............................
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . Timing measurements:
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . get job = 0 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . initial setup = 5 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . payload setup = 3 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . stage-in = 0 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . payload execution = 7533 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . stage-out = 0 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | . log creation = 0 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,327 | INFO     | ..............................
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | 
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | job summary report
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | --------------------------------------------------
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | PanDA job id: 6931736898
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | task id: 47898836
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | errors: (none)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | pilot state: finished 
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | transexitcode: 0
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | exeerrorcode: 0
[2025-12-17 18:54:42] 2025-12-17 17:54:10,397 | INFO     | exeerrordiag: 
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | exitcode: 0
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | exitmsg: OK
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | cpuconsumptiontime: 28923 s
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | nevents: 400
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | neventsw: 0
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | pid: 2863967
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | pgrp: 2863967
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | corecount: 4
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | event service: False
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | sizes: {0: 2283853, 1: 2284052, 3: 2284314, 11: 2284342, 7540: 2312006, 7541: 2321032, 7545: 2321216, 7549: 2321410}
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | --------------------------------------------------
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | 
[2025-12-17 18:54:42] 2025-12-17 17:54:10,398 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-12-17 18:54:42] 2025-12-17 17:54:10,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 18:54:42] 2025-12-17 17:54:10,412 | INFO     | job 6931736898 has completed (purged errors)
[2025-12-17 18:54:42] 2025-12-17 17:54:10,412 | INFO     | overall cleanup function is called
[2025-12-17 18:54:42] 2025-12-17 17:54:11,419 | INFO     | --- collectZombieJob: --- 10, [2863967]
[2025-12-17 18:54:42] 2025-12-17 17:54:11,419 | INFO     | zombie collector waiting for pid 2863967
[2025-12-17 18:54:42] 2025-12-17 17:54:11,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 18:54:42] 2025-12-17 17:54:11,419 | INFO     | collected zombie processes
[2025-12-17 18:54:42] 2025-12-17 17:54:11,419 | INFO     | will attempt to kill all subprocesses of pid=2863967
[2025-12-17 18:54:42] 2025-12-17 17:54:11,532 | INFO     | process IDs to be killed: [2863967] (in reverse order)
[2025-12-17 18:54:42] 2025-12-17 17:54:11,558 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 18:54:42] 2025-12-17 17:54:11,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 18:54:42] 2025-12-17 17:54:11,561 | INFO     | did not find any defunct processes belonging to 2863967
[2025-12-17 18:54:42] 2025-12-17 17:54:11,563 | INFO     | did not find any defunct processes belonging to 2863967
[2025-12-17 18:54:42] 2025-12-17 17:54:11,563 | INFO     | ready for new job
[2025-12-17 18:54:42] 2025-12-17 17:54:11,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 18:54:42] 2025-12-17 17:54:11,564 | INFO     | ***************************************
[2025-12-17 18:54:42] 2025-12-17 17:54:11,565 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 18:54:42] 2025-12-17 17:54:11,565 | INFO     | ***************************************
[2025-12-17 18:54:42] 2025-12-17 17:54:11,565 | INFO     | 
[2025-12-17 18:54:42] 2025-12-17 17:54:11,565 | INFO     | pilot is running in a VM
[2025-12-17 18:54:42] 2025-12-17 17:54:11,565 | INFO     | architecture information:
[2025-12-17 18:54:42] 2025-12-17 17:54:11,566 | INFO     | executing command: cat /etc/os-release
[2025-12-17 18:54:42] 2025-12-17 17:54:11,576 | INFO     | cat /etc/os-release:
[2025-12-17 18:54:42] NAME="CentOS Linux"
[2025-12-17 18:54:42] VERSION="7 (Core)"
[2025-12-17 18:54:42] ID="centos"
[2025-12-17 18:54:42] ID_LIKE="rhel fedora"
[2025-12-17 18:54:42] VERSION_ID="7"
[2025-12-17 18:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 18:54:42] ANSI_COLOR="0;31"
[2025-12-17 18:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 18:54:42] HOME_URL="https://www.centos.org/"
[2025-12-17 18:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 18:54:42] 
[2025-12-17 18:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 18:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 18:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 18:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 18:54:42] 
[2025-12-17 18:54:42] 2025-12-17 17:54:11,576 | INFO     | ***************************************
[2025-12-17 18:54:42] 2025-12-17 17:54:12,080 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-12-17 18:54:42] 2025-12-17 17:54:12,089 | INFO     | sufficient remaining disk space (158799495168 B)
[2025-12-17 18:54:42] 2025-12-17 17:54:12,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 18:54:42] 2025-12-17 17:54:12,089 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 18:54:42] 2025-12-17 17:54:12,089 | INFO     | update_server=False
[2025-12-17 18:54:42] 2025-12-17 17:54:12,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 18:54:42] 2025-12-17 17:54:12,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 18:54:42] 2025-12-17 17:54:12,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 18:54:42] 2025-12-17 17:54:12,521 | INFO     | all data control threads have been joined
[2025-12-17 18:54:42] 2025-12-17 17:54:12,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 18:54:42] 2025-12-17 17:54:12,583 | INFO     | aborting loop
[2025-12-17 18:54:42] 2025-12-17 17:54:12,711 | INFO     | all job control threads have been joined
[2025-12-17 18:54:42] 2025-12-17 17:54:12,913 | INFO     | all payload control threads have been joined
[2025-12-17 18:54:42] 2025-12-17 17:54:12,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 18:54:42] 2025-12-17 17:54:13,095 | INFO     | [job] retrieve thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,095 | INFO     | [job] queue monitor thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,186 | INFO     | [payload] validate_post thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,526 | INFO     | [data] control thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,588 | INFO     | [job] job monitor thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,691 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,714 | INFO     | [data] copytool_in thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,717 | INFO     | [job] control thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,919 | INFO     | [payload] control thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:13,933 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:14,142 | INFO     | [job] validate thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:14,297 | INFO     | [payload] failed_post thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:14,414 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:14,917 | INFO     | [data] copytool_out thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:16,092 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:17,252 | INFO     | [monitor] cgroup control has ended
[2025-12-17 18:54:42] 2025-12-17 17:54:22,978 | INFO     | job.realtimelogging is not enabled
[2025-12-17 18:54:42] 2025-12-17 17:54:23,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 18:54:42] 2025-12-17 17:54:25,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132724800657216)>', '<ExcThread(monitor, started 132724069226240)>']
[2025-12-17 18:54:42] 2025-12-17 17:54:30,852 | INFO     | all workflow threads have been joined
[2025-12-17 18:54:42] 2025-12-17 17:54:30,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 18:54:42] 2025-12-17 17:54:30,852 | INFO     | traces error code: 0
[2025-12-17 18:54:42] 2025-12-17 17:54:30,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 18:54:42] 2025-12-17 17:54:42,216 | INFO     | PID=2857425 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 18:54:42] 2025-12-17 17:54:42,217 | INFO     | .. there are 2 such processes running
[2025-12-17 18:54:42] 2025-12-17 17:54:42,217 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 18:54:42] 2025-12-17 17:54:42,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 18:54:42] 2025-12-17 17:54:42,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 18:54:42] 2025-12-17 17:54:42,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 18:54:42] 2025-12-17 17:54:42,217 | INFO     | [monitor] control thread has ended
[2025-12-17 18:54:42] 2025-12-17 17:54:42,298 [wrapper] ==== pilot stdout END ====
[2025-12-17 18:54:42] 2025-12-17 17:54:42,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 18:54:42] 2025-12-17 17:54:42,303 [wrapper] pilotpid: 2857425
[2025-12-17 18:54:42] 2025-12-17 17:54:42,304 [wrapper] Pilot exit status: 0
[2025-12-17 18:54:42] 2025-12-17 17:54:42,314 [wrapper] pandaids: 6931736898
[2025-12-17 18:54:42] 2025-12-17 17:54:42,341 [wrapper] cleanup supervisor_pilot 2907968 2857426
[2025-12-17 18:54:42] 2025-12-17 17:54:42,344 [wrapper] Test setup, not cleaning
[2025-12-17 18:54:42] 2025-12-17 17:54:42,347 [wrapper] apfmon messages muted
[2025-12-17 18:54:42] 2025-12-17 17:54:42,352 [wrapper] ==== wrapper stdout END ====
[2025-12-17 18:54:42] 2025-12-17 17:54:42,355 [wrapper] ==== wrapper stderr END ====
[2025-12-17 18:54:42]  *** Error codes and diagnostics ***
[2025-12-17 18:54:42]     "exeErrorCode": 0,
[2025-12-17 18:54:42]     "exeErrorDiag": "",
[2025-12-17 18:54:42]     "pilotErrorCode": 0,
[2025-12-17 18:54:42]     "pilotErrorDiag": "",
[2025-12-17 18:54:42]  *** Listing of results directory ***
[2025-12-17 18:54:42] insgesamt 411560
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc    579449 Dez 17 04:48 pilot3.tar.gz
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc      5112 Dez 17 04:50 queuedata.json
[2025-12-17 18:54:42] -rwx------ 1 yeti boinc     36322 Dez 17 04:52 runpilot2-wrapper.sh
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc       100 Dez 17 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 18:54:42] -rwxr-xr-x 1 yeti boinc      7986 Dez 17 16:47 run_atlas
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc       105 Dez 17 16:47 job.xml
[2025-12-17 18:54:42] -rw-r--r-- 2 yeti boinc 215618207 Dez 17 16:47 EVNT.47898833._000145.pool.root.1
[2025-12-17 18:54:42] -rw-r--r-- 2 yeti boinc     15847 Dez 17 16:47 start_atlas.sh
[2025-12-17 18:54:42] drwxrwx--x 2 yeti boinc      4096 Dez 17 16:47 shared
[2025-12-17 18:54:42] -rw-r--r-- 2 yeti boinc    592408 Dez 17 16:47 input.tar.gz
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc      6594 Dez 17 16:47 init_data.xml
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc         0 Dez 17 16:47 boinc_setup_complete
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc         0 Dez 17 16:47 boinc_lockfile
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc      2552 Dez 17 16:47 pandaJob.out
[2025-12-17 18:54:42] -rw------- 1 yeti boinc    987423 Dez 17 16:48 agis_schedconf.cvmfs.json
[2025-12-17 18:54:42] -rw------- 1 yeti boinc   1516240 Dez 17 16:48 agis_ddmendpoints.agis.ALL.json
[2025-12-17 18:54:42] drwx------ 5 yeti boinc      4096 Dez 17 16:48 pilot3
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc       529 Dez 17 18:53 boinc_task_state.xml
[2025-12-17 18:54:42] -rw------- 1 yeti boinc 199042261 Dez 17 18:53 HITS.47898836._003740.pool.root.1
[2025-12-17 18:54:42] -rw------- 1 yeti boinc      1036 Dez 17 18:53 memory_monitor_summary.json
[2025-12-17 18:54:42] -rw------- 1 yeti boinc        95 Dez 17 18:53 pilot_heartbeat.json
[2025-12-17 18:54:42] -rw------- 1 yeti boinc    313578 Dez 17 18:54 log.47898836._003740.job.log.tgz.1
[2025-12-17 18:54:42] -rw------- 1 yeti boinc      7770 Dez 17 18:54 heartbeat.json
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc        27 Dez 17 18:54 wrapper_checkpoint.txt
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc      8192 Dez 17 18:54 boinc_mmap_file
[2025-12-17 18:54:42] -rw------- 1 yeti boinc       822 Dez 17 18:54 pilotlog.txt
[2025-12-17 18:54:42] -rw------- 1 yeti boinc   1117045 Dez 17 18:54 log.47898836._003740.job.log.1
[2025-12-17 18:54:42] -rw------- 1 yeti boinc       357 Dez 17 18:54 output.list
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc       620 Dez 17 18:54 runtime_log
[2025-12-17 18:54:42] -rw------- 1 yeti boinc   1454080 Dez 17 18:54 result.tar.gz
[2025-12-17 18:54:42] -rw------- 1 yeti boinc       640 Dez 17 18:54 xbWNDm9kxp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmktWKDmT9NgIn.diag
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc      9017 Dez 17 18:54 runtime_log.err
[2025-12-17 18:54:42] -rw-r--r-- 1 yeti boinc     21068 Dez 17 18:54 stderr.txt
[2025-12-17 18:54:42] HITS file was successfully produced:
[2025-12-17 18:54:42] -rw------- 1 yeti boinc 199042261 Dez 17 18:53 shared/HITS.pool.root.1
[2025-12-17 18:54:42]  *** Contents of shared directory: ***
[2025-12-17 18:54:42] insgesamt 406972
[2025-12-17 18:54:42] -rw-r--r-- 2 yeti boinc 215618207 Dez 17 16:47 ATLAS.root_0
[2025-12-17 18:54:42] -rw-r--r-- 2 yeti boinc     15847 Dez 17 16:47 start_atlas.sh
[2025-12-17 18:54:42] -rw-r--r-- 2 yeti boinc    592408 Dez 17 16:47 input.tar.gz
[2025-12-17 18:54:42] -rw------- 1 yeti boinc 199042261 Dez 17 18:53 HITS.pool.root.1
[2025-12-17 18:54:42] -rw------- 1 yeti boinc   1454080 Dez 17 18:54 result.tar.gz
18:54:43 (2853629): run_atlas exited; CPU time 29017.779866
18:54:43 (2853629): called boinc_finish(0)

</stderr_txt>
]]>

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