Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:28 (2052455): wrapper (7.7.26015): starting
19:45:28 (2052455): wrapper: running run_atlas (--nthreads 2)
[2025-12-17 19:45:28] Arguments: --nthreads 2
[2025-12-17 19:45:28] Threads: 2
[2025-12-17 19:45:28] Checking for CVMFS
[2025-12-17 19:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 19:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 19:45:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 19:45:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 19:45:28] 2.9.2.0 769479 6353 61884 154119 1 57 36163730 36864000 0 130560 0 3392566 99.987 230917 8799 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 19:45:28] CVMFS is ok
[2025-12-17 19:45:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 19:45:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 19:45:28] Further information can be found at the LHC@home message board.
[2025-12-17 19:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 19:45:28] Checking for apptainer binary...
[2025-12-17 19:45:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 19:45:28] Running /usr/bin/apptainer --version
[2025-12-17 19:45:28] apptainer version 1.4.1-1.1
[2025-12-17 19:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 19:45:28] thA337
[2025-12-17 19:45:28] apptainer works
[2025-12-17 19:45:28] Set ATHENA_PROC_NUMBER=2
[2025-12-17 19:45:28] Set ATHENA_CORE_NUMBER=2
[2025-12-17 19:45:28] Starting ATLAS job with PandaID=6932080300
[2025-12-17 19:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 22:38:26]  *** The last 200 lines of the pilot log: ***
[2025-12-17 22:38:26] 2025-12-17 21:37:54,793 | INFO     | update_server=False
[2025-12-17 22:38:26] 2025-12-17 21:37:54,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 22:38:26] 2025-12-17 21:37:54,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 22:38:26] 2025-12-17 21:37:54,795 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 22:38:26] 2025-12-17 21:37:54,795 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 22:38:26] 2025-12-17 21:37:54,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 22:38:26] 2025-12-17 21:37:54,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 22:38:26] 2025-12-17 21:37:54,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 22:38:26] 2025-12-17 21:37:55,029 | INFO     | all job control threads have been joined
[2025-12-17 22:38:26] 2025-12-17 21:37:55,059 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 22:38:26] 2025-12-17 21:37:55,060 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 22:38:26] 2025-12-17 21:37:55,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 22:38:26] 2025-12-17 21:37:55,060 | INFO     | will abort loop
[2025-12-17 22:38:26] 2025-12-17 21:37:55,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 22:38:26] 2025-12-17 21:37:55,588 | INFO     | all payload control threads have been joined
[2025-12-17 22:38:26] 2025-12-17 21:37:55,695 | INFO     | [monitor] cgroup control has ended
[2025-12-17 22:38:26] 2025-12-17 21:37:55,721 | INFO     | all data control threads have been joined
[2025-12-17 22:38:26] 2025-12-17 21:37:55,799 | INFO     | [job] retrieve thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:55,800 | INFO     | [job] queue monitor thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:55,874 | INFO     | [job] validate thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:55,962 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,005 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,035 | INFO     | [job] control thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,066 | INFO     | [job] job monitor thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,103 | INFO     | [payload] failed_post thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,189 | INFO     | [data] copytool_in thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,593 | INFO     | [payload] control thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,727 | INFO     | [data] control thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,752 | INFO     | [payload] validate_post thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:56,802 | INFO     | [data] copytool_out thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:57,052 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:59,192 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 22:38:26] 2025-12-17 21:37:59,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218182231872)>', '<ExcThread(monitor, started 140217252046592)>']
[2025-12-17 22:38:26] 2025-12-17 21:37:59,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 22:38:26] 2025-12-17 21:37:59,823 | INFO     | [monitor] control thread has ended
[2025-12-17 22:38:26] 2025-12-17 21:38:04,549 | INFO     | all workflow threads have been joined
[2025-12-17 22:38:26] 2025-12-17 21:38:04,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 22:38:26] 2025-12-17 21:38:04,550 | INFO     | traces error code: 0
[2025-12-17 22:38:26] 2025-12-17 21:38:04,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 22:38:26] 2025-12-17 21:38:04,590 [wrapper] ==== pilot stdout END ====
[2025-12-17 22:38:26] 2025-12-17 21:38:04,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 22:38:26] 2025-12-17 21:38:04,595 [wrapper] pilotpid: 2056168
[2025-12-17 22:38:26] 2025-12-17 21:38:04,597 [wrapper] Pilot exit status: 0
[2025-12-17 22:38:26] 2025-12-17 21:38:04,603 [wrapper] pandaids: 6932080300
[2025-12-17 22:38:26] 2025-12-17 21:38:04,614 [wrapper] cleanup supervisor_pilot 2081450 2056169
[2025-12-17 22:38:26] 2025-12-17 21:38:04,616 [wrapper] Test setup, not cleaning
[2025-12-17 22:38:26] 2025-12-17 21:38:04,618 [wrapper] apfmon messages muted
[2025-12-17 22:38:26] 2025-12-17 21:38:04,620 [wrapper] ==== wrapper stdout END ====
[2025-12-17 22:38:26] 2025-12-17 21:38:04,622 [wrapper] ==== wrapper stderr END ====
[2025-12-17 22:38:26]  *** Error codes and diagnostics ***
[2025-12-17 22:38:26]     "exeErrorCode": 0,
[2025-12-17 22:38:26]     "exeErrorDiag": "",
[2025-12-17 22:38:26]     "pilotErrorCode": 0,
[2025-12-17 22:38:26]     "pilotErrorDiag": "",
[2025-12-17 22:38:26]  *** Listing of results directory ***
[2025-12-17 22:38:26] total 401632
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc    579449 Dec 17 04:48 pilot3.tar.gz
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc      5112 Dec 17 04:50 queuedata.json
[2025-12-17 22:38:26] -rwx------ 1 boinc boinc     36322 Dec 17 04:52 runpilot2-wrapper.sh
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc       100 Dec 17 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 22:38:26] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 19:45 run_atlas
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc       105 Dec 17 19:45 job.xml
[2025-12-17 22:38:26] -rw-r--r-- 2 boinc boinc 199509827 Dec 17 19:45 EVNT.47905888._000019.pool.root.1
[2025-12-17 22:38:26] -rw-r--r-- 2 boinc boinc    592376 Dec 17 19:45 input.tar.gz
[2025-12-17 22:38:26] -rw-r--r-- 2 boinc boinc     15847 Dec 17 19:45 start_atlas.sh
[2025-12-17 22:38:26] drwxrwx--x 2 boinc boinc      4096 Dec 17 19:45 shared
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc         0 Dec 17 19:45 boinc_setup_complete
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc      6206 Dec 17 19:45 init_data.xml
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc         0 Dec 17 19:45 boinc_lockfile
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc      2445 Dec 17 19:45 pandaJob.out
[2025-12-17 22:38:26] -rw------- 1 boinc boinc    988136 Dec 17 19:45 agis_schedconf.cvmfs.json
[2025-12-17 22:38:26] -rw------- 1 boinc boinc   1516240 Dec 17 19:45 agis_ddmendpoints.agis.ALL.json
[2025-12-17 22:38:26] drwx------ 5 boinc boinc      4096 Dec 17 19:45 pilot3
[2025-12-17 22:38:26] -rw------- 1 boinc boinc 204303643 Dec 17 22:37 HITS.47905890._000512.pool.root.1
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc       530 Dec 17 22:37 boinc_task_state.xml
[2025-12-17 22:38:26] -rw------- 1 boinc boinc        95 Dec 17 22:37 pilot_heartbeat.json
[2025-12-17 22:38:26] -rw------- 1 boinc boinc      1012 Dec 17 22:37 memory_monitor_summary.json
[2025-12-17 22:38:26] -rw------- 1 boinc boinc    309863 Dec 17 22:37 log.47905890._000512.job.log.tgz.1
[2025-12-17 22:38:26] -rw------- 1 boinc boinc      7741 Dec 17 22:37 heartbeat.json
[2025-12-17 22:38:26] -rw------- 1 boinc boinc      4742 Dec 17 22:38 pilotlog.txt
[2025-12-17 22:38:26] -rw------- 1 boinc boinc   1469130 Dec 17 22:38 log.47905890._000512.job.log.1
[2025-12-17 22:38:26] -rw------- 1 boinc boinc       357 Dec 17 22:38 output.list
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc       620 Dec 17 22:38 runtime_log
[2025-12-17 22:38:26] -rw------- 1 boinc boinc   1802240 Dec 17 22:38 result.tar.gz
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc      8898 Dec 17 22:38 runtime_log.err
[2025-12-17 22:38:26] -rw------- 1 boinc boinc       661 Dec 17 22:38 oY5LDmBlxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlNbKDmy1ccYm.diag
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc      8192 Dec 17 22:38 boinc_mmap_file
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc        28 Dec 17 22:38 wrapper_checkpoint.txt
[2025-12-17 22:38:26] -rw-r--r-- 1 boinc boinc      7566 Dec 17 22:38 stderr.txt
[2025-12-17 22:38:26] HITS file was successfully produced:
[2025-12-17 22:38:26] -rw------- 1 boinc boinc 204303643 Dec 17 22:37 shared/HITS.pool.root.1
[2025-12-17 22:38:26]  *** Contents of shared directory: ***
[2025-12-17 22:38:26] total 396716
[2025-12-17 22:38:26] -rw-r--r-- 2 boinc boinc 199509827 Dec 17 19:45 ATLAS.root_0
[2025-12-17 22:38:26] -rw-r--r-- 2 boinc boinc    592376 Dec 17 19:45 input.tar.gz
[2025-12-17 22:38:26] -rw-r--r-- 2 boinc boinc     15847 Dec 17 19:45 start_atlas.sh
[2025-12-17 22:38:26] -rw------- 1 boinc boinc 204303643 Dec 17 22:37 HITS.pool.root.1
[2025-12-17 22:38:26] -rw------- 1 boinc boinc   1802240 Dec 17 22:38 result.tar.gz
22:38:28 (2052455): run_atlas exited; CPU time 20262.782012
22:38:28 (2052455): called boinc_finish(0)

</stderr_txt>
]]>

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