Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:15:16 (2351579): wrapper (7.7.26015): starting
01:15:16 (2351579): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 01:15:16] Arguments: --nthreads 12
[2025-12-17 01:15:16] Threads: 12
[2025-12-17 01:15:16] Checking for CVMFS
[2025-12-17 01:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 01:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 01:15:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 01:15:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 01:15:21] 2.11.5.0 1139287 23252 214980 154105 3 417 35392900 45568001 18025 130560 0 124591802 99.823 70767770 23305 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-17 01:15:21] CVMFS is ok
[2025-12-17 01:15:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 01:15:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 01:15:21] Further information can be found at the LHC@home message board.
[2025-12-17 01:15:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 01:15:21] Checking for apptainer binary...
[2025-12-17 01:15:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 01:15:21] Running /usr/bin/apptainer --version
[2025-12-17 01:15:21] apptainer version 1.4.1-1.el9
[2025-12-17 01:15:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 01:15:23] wns0042.triumf.lcg
[2025-12-17 01:15:23] apptainer works
[2025-12-17 01:15:23] Set ATHENA_PROC_NUMBER=12
[2025-12-17 01:15:23] Set ATHENA_CORE_NUMBER=12
[2025-12-17 01:15:23] Starting ATLAS job with PandaID=6931737293
[2025-12-17 01:15:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 01:23:49]  *** The last 200 lines of the pilot log: ***
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | ..............................
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | . Timing measurements:
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . get job = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . initial setup = 5 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . payload setup = 56 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . stage-in = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . payload execution = 97 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . stage-out = 1 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . log creation = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | ..............................
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 01:23:49] 2025-12-17 09:23:12,177 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931737293/pilotlog.txt
[2025-12-17 01:23:49] 2025-12-17 09:23:12,209 | INFO     | monitor loop #108: job 0:6931737293 is in state 'failed'
[2025-12-17 01:23:49] 2025-12-17 09:23:12,210 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,266 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-17 01:23:49] - Log from pilotlog.txt -
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | WARNING  | wrong length of table data, x=[1765963179.0], y=[1548.0] (must be same and length>=4)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | could have reported an average CPU frequency of 1470 MHz (4 samples)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | ..............................
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | . Timing measurements:
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . get job = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . initial setup = 5 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . payload setup = 56 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . stage-in = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . payload execution = 97 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . stage-out = 1 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . log creation = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | ..............................
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 01:23:49] 2025-12-17 09:23:12,177 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931737293/pilotlog.txt
[2025-12-17 01:23:49] 2025-12-17 09:23:12,209 | INFO     | monitor loop #108: job 0:6931737293 is in state 'failed'
[2025-12-17 01:23:49] 2025-12-17 09:23:12,210 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,267 | WARNING  | 
[2025-12-17 01:23:49] [begin log extracts]
[2025-12-17 01:23:49] - Log from pilotlog.txt -
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 01:23:49] 2025-12-17 09:23:12,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | WARNING  | wrong length of table data, x=[1765963179.0], y=[1548.0] (must be same and length>=4)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | could have reported an average CPU frequency of 1470 MHz (4 samples)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | ..............................
[2025-12-17 01:23:49] 2025-12-17 09:23:12,175 | INFO     | . Timing measurements:
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . get job = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . initial setup = 5 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . payload setup = 56 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . stage-in = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . payload execution = 97 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . stage-out = 1 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | . log creation = 0 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | ..............................
[2025-12-17 01:23:49] 2025-12-17 09:23:12,176 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-17 01:23:49] 2025-12-17 09:23:12,177 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931737293/pilotlog.txt
[2025-12-17 01:23:49] 2025-12-17 09:23:12,209 | INFO     | monitor loop #108: job 0:6931737293 is in state 'failed'
[2025-12-17 01:23:49] 2025-12-17 09:23:12,210 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-12-17 01:23:49] [end log extracts]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,267 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,269 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-17 01:23:49] 2025-12-17 09:23:12,521 | INFO     | 
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | job summary report
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | --------------------------------------------------
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | PanDA job id: 6931737293
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | task id: 47886831
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-17 01:20:18,155 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | pilot state: failed 
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | transexitcode: 65
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | exeerrorcode: 65
[2025-12-17 01:23:49] 2025-12-17 09:23:12,522 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | exitcode: 65
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | cpuconsumptiontime: 30 s
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | nevents: 0
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | neventsw: 0
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | pid: 2362826
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | pgrp: 2362826
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | corecount: 12
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | event service: False
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | sizes: {0: 2283165, 1: 2283847, 2: 2284046, 3: 2284046, 15: 2284074, 26: 2284102, 38: 2284258, 39: 2284548, 49: 2284576, 155: 2307802, 158: 2312094, 160: 2312402, 
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | --------------------------------------------------
[2025-12-17 01:23:49] 2025-12-17 09:23:12,523 | INFO     | 
[2025-12-17 01:23:49] 2025-12-17 09:23:12,524 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-17 01:23:49] 2025-12-17 09:23:12,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 01:23:49] 2025-12-17 09:23:12,811 | INFO     | job 6931737293 has completed (purged errors)
[2025-12-17 01:23:49] 2025-12-17 09:23:12,811 | INFO     | overall cleanup function is called
[2025-12-17 01:23:49] 2025-12-17 09:23:13,825 | INFO     | --- collectZombieJob: --- 10, [2362826]
[2025-12-17 01:23:49] 2025-12-17 09:23:13,825 | INFO     | zombie collector waiting for pid 2362826
[2025-12-17 01:23:49] 2025-12-17 09:23:13,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 01:23:49] 2025-12-17 09:23:13,826 | INFO     | collected zombie processes
[2025-12-17 01:23:49] 2025-12-17 09:23:13,826 | INFO     | will attempt to kill all subprocesses of pid=2362826
[2025-12-17 01:23:49] 2025-12-17 09:23:15,756 | INFO     | process IDs to be killed: [2362826] (in reverse order)
[2025-12-17 01:23:49] 2025-12-17 09:23:16,393 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 01:23:49] 2025-12-17 09:23:16,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 01:23:49] 2025-12-17 09:23:16,468 | INFO     | did not find any defunct processes belonging to 2362826
[2025-12-17 01:23:49] 2025-12-17 09:23:16,562 | INFO     | did not find any defunct processes belonging to 2362826
[2025-12-17 01:23:49] 2025-12-17 09:23:16,562 | INFO     | ready for new job
[2025-12-17 01:23:49] 2025-12-17 09:23:16,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 01:23:49] 2025-12-17 09:23:16,564 | INFO     | ***************************************
[2025-12-17 01:23:49] 2025-12-17 09:23:16,564 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 01:23:49] 2025-12-17 09:23:16,564 | INFO     | ***************************************
[2025-12-17 01:23:49] 2025-12-17 09:23:16,564 | INFO     | 
[2025-12-17 01:23:49] 2025-12-17 09:23:16,604 | INFO     | architecture information:
[2025-12-17 01:23:49] 2025-12-17 09:23:16,605 | INFO     | executing command: cat /etc/os-release
[2025-12-17 01:23:49] 2025-12-17 09:23:16,645 | INFO     | cat /etc/os-release:
[2025-12-17 01:23:49] NAME="CentOS Linux"
[2025-12-17 01:23:49] VERSION="7 (Core)"
[2025-12-17 01:23:49] ID="centos"
[2025-12-17 01:23:49] ID_LIKE="rhel fedora"
[2025-12-17 01:23:49] VERSION_ID="7"
[2025-12-17 01:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 01:23:49] ANSI_COLOR="0;31"
[2025-12-17 01:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 01:23:49] HOME_URL="https://www.centos.org/"
[2025-12-17 01:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 01:23:49] 
[2025-12-17 01:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 01:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 01:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 01:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 01:23:49] 
[2025-12-17 01:23:49] 2025-12-17 09:23:16,645 | INFO     | ***************************************
[2025-12-17 01:23:49] 2025-12-17 09:23:17,149 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-17 01:23:49] 2025-12-17 09:23:17,236 | INFO     | sufficient remaining disk space (2124262932480 B)
[2025-12-17 01:23:49] 2025-12-17 09:23:17,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 01:23:49] 2025-12-17 09:23:17,237 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 01:23:49] 2025-12-17 09:23:17,237 | INFO     | update_server=False
[2025-12-17 01:23:49] 2025-12-17 09:23:17,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 01:23:49] 2025-12-17 09:23:17,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 01:23:49] 2025-12-17 09:23:17,241 | INFO     | all job control threads have been joined
[2025-12-17 01:23:49] 2025-12-17 09:23:17,278 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 01:23:49] 2025-12-17 09:23:17,278 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 01:23:49] 2025-12-17 09:23:17,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:23:49] 2025-12-17 09:23:17,279 | INFO     | will abort loop
[2025-12-17 01:23:49] 2025-12-17 09:23:17,486 | INFO     | all data control threads have been joined
[2025-12-17 01:23:49] 2025-12-17 09:23:17,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:23:49] 2025-12-17 09:23:18,243 | INFO     | [job] retrieve thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,247 | INFO     | [job] control thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,251 | INFO     | all payload control threads have been joined
[2025-12-17 01:23:49] 2025-12-17 09:23:18,284 | INFO     | [job] job monitor thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,384 | INFO     | [job] validate thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,493 | INFO     | [data] control thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,600 | INFO     | [job] queue monitor thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,766 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:18,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 01:23:49] 2025-12-17 09:23:19,172 | INFO     | [payload] failed_post thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,245 | INFO     | [data] copytool_out thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,257 | INFO     | [payload] control thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,262 | INFO     | [data] copytool_in thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,263 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,278 | INFO     | [payload] validate_post thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,634 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:19,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:22,646 | INFO     | [monitor] cgroup control has ended
[2025-12-17 01:23:49] 2025-12-17 09:23:22,893 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 01:23:49] 2025-12-17 09:23:24,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471535961920)>', '<ExcThread(monitor, started 140470705440512)>']
[2025-12-17 01:23:49] 2025-12-17 09:23:29,922 | INFO     | all workflow threads have been joined
[2025-12-17 01:23:49] 2025-12-17 09:23:29,922 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 01:23:49] 2025-12-17 09:23:29,923 | INFO     | traces error code: 0
[2025-12-17 01:23:49] 2025-12-17 09:23:29,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 01:23:49] 2025-12-17 09:23:43,879 | INFO     | 416s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 01:23:49] 2025-12-17 09:23:47,137 | INFO     | PID=2355528 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 01:23:49] 2025-12-17 09:23:47,137 | INFO     | .. there are 42 such processes running
[2025-12-17 01:23:49] 2025-12-17 09:23:47,138 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 01:23:49] 2025-12-17 09:23:47,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 01:23:49] 2025-12-17 09:23:47,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 01:23:49] 2025-12-17 09:23:47,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 01:23:49] 2025-12-17 09:23:47,139 | INFO     | [monitor] control thread has ended
[2025-12-17 01:23:49] 2025-12-17 09:23:48,253 [wrapper] ==== pilot stdout END ====
[2025-12-17 01:23:49] 2025-12-17 09:23:48,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 01:23:49] 2025-12-17 09:23:48,302 [wrapper] pilotpid: 2355528
[2025-12-17 01:23:49] 2025-12-17 09:23:48,325 [wrapper] Pilot exit status: 0
[2025-12-17 01:23:49] 2025-12-17 09:23:48,528 [wrapper] pandaids: 6931737293
[2025-12-17 01:23:49] 2025-12-17 09:23:49,082 [wrapper] cleanup supervisor_pilot 2355534 2355529
[2025-12-17 01:23:49] 2025-12-17 09:23:49,122 [wrapper] Test setup, not cleaning
[2025-12-17 01:23:49] 2025-12-17 09:23:49,151 [wrapper] apfmon messages muted
[2025-12-17 01:23:49] 2025-12-17 09:23:49,179 [wrapper] ==== wrapper stdout END ====
[2025-12-17 01:23:49] 2025-12-17 09:23:49,205 [wrapper] ==== wrapper stderr END ====
[2025-12-17 01:23:49]  *** Error codes and diagnostics ***
[2025-12-17 01:23:49]     "exeErrorCode": 65,
[2025-12-17 01:23:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 01:23:49]     "pilotErrorCode": 1305,
[2025-12-17 01:23:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-17 01:23:49]  *** Listing of results directory ***
[2025-12-17 01:23:49] total 190356
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc    579449 Dec 16 19:48 pilot3.tar.gz
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc      5112 Dec 16 19:50 queuedata.json
[2025-12-17 01:23:49] -rwx------. 1 boinc boinc     36322 Dec 16 19:51 runpilot2-wrapper.sh
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc       100 Dec 17 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 01:23:49] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 01:15 run_atlas
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc       105 Dec 17 01:15 job.xml
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc      6596 Dec 17 01:15 init_data.xml
[2025-12-17 01:23:49] -rw-r--r--. 2 boinc boinc 190764943 Dec 17 01:15 EVNT.47886829._000678.pool.root.1
[2025-12-17 01:23:49] drwxrwx--x. 2 boinc boinc      4096 Dec 17 01:15 shared
[2025-12-17 01:23:49] -rw-r--r--. 2 boinc boinc    592414 Dec 17 01:15 input.tar.gz
[2025-12-17 01:23:49] -rw-r--r--. 2 boinc boinc     15847 Dec 17 01:15 start_atlas.sh
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc         0 Dec 17 01:15 boinc_lockfile
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc      2539 Dec 17 01:15 pandaJob.out
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc    987417 Dec 17 01:16 agis_schedconf.cvmfs.json
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc   1516240 Dec 17 01:16 agis_ddmendpoints.agis.ALL.json
[2025-12-17 01:23:49] drwx------. 5 boinc boinc      4096 Dec 17 01:16 pilot3
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc       949 Dec 17 01:20 memory_monitor_summary.json
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc     23017 Dec 17 01:20 log.47886831._016983.job.log.tgz.1
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc      8406 Dec 17 01:23 heartbeat.json
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc      8192 Dec 17 01:23 boinc_mmap_file
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc        23 Dec 17 01:23 wrapper_checkpoint.txt
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc        95 Dec 17 01:23 pilot_heartbeat.json
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc       937 Dec 17 01:23 pilotlog.txt
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc       525 Dec 17 01:23 boinc_task_state.xml
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc    104571 Dec 17 01:23 log.47886831._016983.job.log.1
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc       188 Dec 17 01:23 output.list
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc       620 Dec 17 01:23 runtime_log
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc    143360 Dec 17 01:23 result.tar.gz
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc      8636 Dec 17 01:23 runtime_log.err
[2025-12-17 01:23:49] -rw-------. 1 boinc boinc       647 Dec 17 01:23 3F7MDmzkxp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmArWKDmA5g1Ym.diag
[2025-12-17 01:23:49] -rw-r--r--. 1 boinc boinc     21880 Dec 17 01:23 stderr.txt
[2025-12-17 01:23:50] No HITS result produced
[2025-12-17 01:23:50]  *** Contents of shared directory: ***
[2025-12-17 01:23:50] total 187036
[2025-12-17 01:23:50] -rw-r--r--. 2 boinc boinc 190764943 Dec 17 01:15 ATLAS.root_0
[2025-12-17 01:23:50] -rw-r--r--. 2 boinc boinc    592414 Dec 17 01:15 input.tar.gz
[2025-12-17 01:23:50] -rw-r--r--. 2 boinc boinc     15847 Dec 17 01:15 start_atlas.sh
[2025-12-17 01:23:50] -rw-------. 1 boinc boinc    143360 Dec 17 01:23 result.tar.gz
01:23:51 (2351579): run_atlas exited; CPU time 51.261933
01:23:51 (2351579): called boinc_finish(0)

</stderr_txt>
]]>

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