Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:57:44 (15925): wrapper (7.7.26015): starting
03:57:44 (15925): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 03:57:44] Arguments: --nthreads 8
[2025-12-17 03:57:44] Threads: 8
[2025-12-17 03:57:44] Checking for CVMFS
[2025-12-17 03:57:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:57:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:57:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:57:44] 2.11.2.0 26213 95636 87388 154105 1 57 17064946 20275201 1 130560 0 26069072 99.848 5878204 32260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 03:57:44] CVMFS is ok
[2025-12-17 03:57:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 03:57:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 03:57:44] Further information can be found at the LHC@home message board.
[2025-12-17 03:57:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:57:44] Checking for apptainer binary...
[2025-12-17 03:57:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:57:44] Running /usr/bin/apptainer --version
[2025-12-17 03:57:44] apptainer version 1.3.2-1.el7
[2025-12-17 03:57:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:57:46] c-115-4.aglt2.org
[2025-12-17 03:57:46] apptainer works
[2025-12-17 03:57:46] Set ATHENA_PROC_NUMBER=8
[2025-12-17 03:57:46] Set ATHENA_CORE_NUMBER=8
[2025-12-17 03:57:46] Starting ATLAS job with PandaID=6932080584
[2025-12-17 03:57:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 07:16:48]  *** The last 200 lines of the pilot log: ***
[2025-12-17 07:16:48] 2025-12-17 12:16:14,231 | INFO     | time since job start (11890s) is within the limit (174528.0s)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,253 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 07:16:48] 2025-12-17 12:16:15,257 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1829.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,259 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932080584/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,260 | INFO     | extracted standard info from prmon json
[2025-12-17 07:16:48] 2025-12-17 12:16:15,260 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 07:16:48] 2025-12-17 12:16:15,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 07:16:48] 2025-12-17 12:16:15,260 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 07:16:48] 2025-12-17 12:16:15,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 07:16:48] 2025-12-17 12:16:15,264 | INFO     | fitting pss+swap vs Time
[2025-12-17 07:16:48] 2025-12-17 12:16:15,265 | INFO     | sum of square deviations: 2299168690.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,266 | INFO     | sum of deviations: 13022282439.999994
[2025-12-17 07:16:48] 2025-12-17 12:16:15,266 | INFO     | mean x: 1765967832.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,266 | INFO     | mean y: 2554210.158974359
[2025-12-17 07:16:48] 2025-12-17 12:16:15,266 | INFO     | intersect: -9999727044.053156
[2025-12-17 07:16:48] 2025-12-17 12:16:15,267 | INFO     | chi2: 2.1844450450004627
[2025-12-17 07:16:48] 2025-12-17 12:16:15,267 | INFO     | sum of square deviations: 2126802667.5
[2025-12-17 07:16:48] 2025-12-17 12:16:15,268 | INFO     | sum of deviations: 25758932867.999996
[2025-12-17 07:16:48] 2025-12-17 12:16:15,268 | INFO     | mean x: 1765967679.5
[2025-12-17 07:16:48] 2025-12-17 12:16:15,269 | INFO     | mean y: 2565235.147368421
[2025-12-17 07:16:48] 2025-12-17 12:16:15,269 | INFO     | intersect: -21386087129.46992
[2025-12-17 07:16:48] 2025-12-17 12:16:15,269 | INFO     | chi2: 1.4195371742619547
[2025-12-17 07:16:48] 2025-12-17 12:16:15,269 | INFO     | current chi2=1.4195371742619547 (change=35.01611873867699 %)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,270 | INFO     | sum of square deviations: 1963274020.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,271 | INFO     | sum of deviations: 25007744769.000004
[2025-12-17 07:16:48] 2025-12-17 12:16:15,271 | INFO     | mean x: 1765967527.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,271 | INFO     | mean y: 2564534.4864864866
[2025-12-17 07:16:48] 2025-12-17 12:16:15,271 | INFO     | intersect: -22491934315.734188
[2025-12-17 07:16:48] 2025-12-17 12:16:15,271 | INFO     | chi2: 1.4205164871911378
[2025-12-17 07:16:48] 2025-12-17 12:16:15,272 | INFO     | current chi2=1.4205164871911378 (change=-0.06898818480694159 %)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,272 | INFO     | right removable region: 184
[2025-12-17 07:16:48] 2025-12-17 12:16:15,272 | INFO     | sum of square deviations: 2126802667.5
[2025-12-17 07:16:48] 2025-12-17 12:16:15,273 | INFO     | sum of deviations: -15573448535.000002
[2025-12-17 07:16:48] 2025-12-17 12:16:15,273 | INFO     | mean x: 1765967984.5
[2025-12-17 07:16:48] 2025-12-17 12:16:15,273 | INFO     | mean y: 2579202.210526316
[2025-12-17 07:16:48] 2025-12-17 12:16:15,274 | INFO     | intersect: 12933826628.84487
[2025-12-17 07:16:48] 2025-12-17 12:16:15,274 | INFO     | chi2: 0.8537129933626858
[2025-12-17 07:16:48] 2025-12-17 12:16:15,274 | INFO     | current chi2=0.8537129933626858 (change=60.91854105844513 %)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,274 | INFO     | sum of square deviations: 1963274020.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,275 | INFO     | sum of deviations: -14971695674.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,276 | INFO     | mean x: 1765968137.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,276 | INFO     | mean y: 2578586.2216216214
[2025-12-17 07:16:48] 2025-12-17 12:16:15,276 | INFO     | intersect: 13469642912.343933
[2025-12-17 07:16:48] 2025-12-17 12:16:15,276 | INFO     | chi2: 0.8392305962175344
[2025-12-17 07:16:48] 2025-12-17 12:16:15,277 | INFO     | current chi2=0.8392305962175344 (change=1.6964011626561737 %)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,277 | INFO     | left removable region: 20
[2025-12-17 07:16:48] 2025-12-17 12:16:15,277 | INFO     | sum of square deviations: 1367709365.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,278 | INFO     | sum of deviations: 4979932152.0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,278 | INFO     | mean x: 1765968106.5
[2025-12-17 07:16:48] 2025-12-17 12:16:15,278 | INFO     | mean y: 2582825.3780487804
[2025-12-17 07:16:48] 2025-12-17 12:16:15,278 | INFO     | intersect: -6427439208.554511
[2025-12-17 07:16:48] 2025-12-17 12:16:15,279 | INFO     | chi2: 0.0016048140017309058
[2025-12-17 07:16:48] 2025-12-17 12:16:15,279 | INFO     | current memory leak: 3.64 B/s (using 164 data points, chi2=0.00)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,279 | INFO     | could have reported an average CPU frequency of 2233 MHz (10 samples)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,280 | INFO     | ..............................
[2025-12-17 07:16:48] 2025-12-17 12:16:15,280 | INFO     | . Timing measurements:
[2025-12-17 07:16:48] 2025-12-17 12:16:15,280 | INFO     | . get job = 0 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,280 | INFO     | . initial setup = 2 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,280 | INFO     | . payload setup = 8 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,280 | INFO     | . stage-in = 0 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,281 | INFO     | . payload execution = 11850 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,281 | INFO     | . stage-out = 2 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,281 | INFO     | . log creation = 0 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,281 | INFO     | ..............................
[2025-12-17 07:16:48] 2025-12-17 12:16:15,417 | INFO     | 
[2025-12-17 07:16:48] 2025-12-17 12:16:15,418 | INFO     | job summary report
[2025-12-17 07:16:48] 2025-12-17 12:16:15,418 | INFO     | --------------------------------------------------
[2025-12-17 07:16:48] 2025-12-17 12:16:15,418 | INFO     | PanDA job id: 6932080584
[2025-12-17 07:16:48] 2025-12-17 12:16:15,418 | INFO     | task id: 47928820
[2025-12-17 07:16:48] 2025-12-17 12:16:15,419 | INFO     | errors: (none)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 07:16:48] 2025-12-17 12:16:15,419 | INFO     | pilot state: finished 
[2025-12-17 07:16:48] 2025-12-17 12:16:15,419 | INFO     | transexitcode: 0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,420 | INFO     | exeerrorcode: 0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,420 | INFO     | exeerrordiag: 
[2025-12-17 07:16:48] 2025-12-17 12:16:15,420 | INFO     | exitcode: 0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,420 | INFO     | exitmsg: OK
[2025-12-17 07:16:48] 2025-12-17 12:16:15,420 | INFO     | cpuconsumptiontime: 89867 s
[2025-12-17 07:16:48] 2025-12-17 12:16:15,421 | INFO     | nevents: 400
[2025-12-17 07:16:48] 2025-12-17 12:16:15,421 | INFO     | neventsw: 0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,421 | INFO     | pid: 26092
[2025-12-17 07:16:48] 2025-12-17 12:16:15,421 | INFO     | pgrp: 26092
[2025-12-17 07:16:48] 2025-12-17 12:16:15,422 | INFO     | corecount: 8
[2025-12-17 07:16:48] 2025-12-17 12:16:15,422 | INFO     | event service: False
[2025-12-17 07:16:48] 2025-12-17 12:16:15,422 | INFO     | sizes: {0: 2283202, 1: 2284058, 7: 2284320, 12: 2284348, 11861: 2313828, 11865: 2322826, 11866: 2323010, 11873: 2323204}
[2025-12-17 07:16:48] 2025-12-17 12:16:15,422 | INFO     | --------------------------------------------------
[2025-12-17 07:16:48] 2025-12-17 12:16:15,423 | INFO     | 
[2025-12-17 07:16:48] 2025-12-17 12:16:15,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 07:16:48] 2025-12-17 12:16:15,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 07:16:48] 2025-12-17 12:16:15,454 | INFO     | job 6932080584 has completed (purged errors)
[2025-12-17 07:16:48] 2025-12-17 12:16:15,454 | INFO     | overall cleanup function is called
[2025-12-17 07:16:48] 2025-12-17 12:16:15,477 | INFO     | PID=19599 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 07:16:48] 2025-12-17 12:16:16,459 | INFO     | --- collectZombieJob: --- 10, [26092]
[2025-12-17 07:16:48] 2025-12-17 12:16:16,460 | INFO     | zombie collector waiting for pid 26092
[2025-12-17 07:16:48] 2025-12-17 12:16:16,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 07:16:48] 2025-12-17 12:16:16,460 | INFO     | collected zombie processes
[2025-12-17 07:16:48] 2025-12-17 12:16:16,460 | INFO     | will attempt to kill all subprocesses of pid=26092
[2025-12-17 07:16:48] 2025-12-17 12:16:16,545 | INFO     | process IDs to be killed: [26092] (in reverse order)
[2025-12-17 07:16:48] 2025-12-17 12:16:16,603 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 07:16:48] 2025-12-17 12:16:16,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 07:16:48] 2025-12-17 12:16:16,613 | INFO     | did not find any defunct processes belonging to 26092
[2025-12-17 07:16:48] 2025-12-17 12:16:16,616 | INFO     | did not find any defunct processes belonging to 26092
[2025-12-17 07:16:48] 2025-12-17 12:16:16,616 | INFO     | ready for new job
[2025-12-17 07:16:48] 2025-12-17 12:16:16,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 07:16:48] 2025-12-17 12:16:16,618 | INFO     | ***************************************
[2025-12-17 07:16:48] 2025-12-17 12:16:16,618 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 07:16:48] 2025-12-17 12:16:16,618 | INFO     | ***************************************
[2025-12-17 07:16:48] 2025-12-17 12:16:16,618 | INFO     | 
[2025-12-17 07:16:48] 2025-12-17 12:16:16,619 | INFO     | architecture information:
[2025-12-17 07:16:48] 2025-12-17 12:16:16,619 | INFO     | executing command: cat /etc/os-release
[2025-12-17 07:16:48] 2025-12-17 12:16:16,638 | INFO     | cat /etc/os-release:
[2025-12-17 07:16:48] NAME="CentOS Linux"
[2025-12-17 07:16:48] VERSION="7 (Core)"
[2025-12-17 07:16:48] ID="centos"
[2025-12-17 07:16:48] ID_LIKE="rhel fedora"
[2025-12-17 07:16:48] VERSION_ID="7"
[2025-12-17 07:16:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 07:16:48] ANSI_COLOR="0;31"
[2025-12-17 07:16:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 07:16:48] HOME_URL="https://www.centos.org/"
[2025-12-17 07:16:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 07:16:48] 
[2025-12-17 07:16:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 07:16:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 07:16:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 07:16:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 07:16:48] 
[2025-12-17 07:16:48] 2025-12-17 12:16:16,638 | INFO     | ***************************************
[2025-12-17 07:16:48] 2025-12-17 12:16:17,141 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 07:16:48] 2025-12-17 12:16:17,163 | INFO     | sufficient remaining disk space (18216910848 B)
[2025-12-17 07:16:48] 2025-12-17 12:16:17,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 07:16:48] 2025-12-17 12:16:17,164 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 07:16:48] 2025-12-17 12:16:17,164 | INFO     | update_server=False
[2025-12-17 07:16:48] 2025-12-17 12:16:17,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 07:16:48] 2025-12-17 12:16:17,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:16:48] 2025-12-17 12:16:17,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 07:16:48] 2025-12-17 12:16:17,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:16:48] 2025-12-17 12:16:17,166 | INFO     | aborting loop
[2025-12-17 07:16:48] 2025-12-17 12:16:18,026 | INFO     | all payload control threads have been joined
[2025-12-17 07:16:48] 2025-12-17 12:16:18,153 | INFO     | all data control threads have been joined
[2025-12-17 07:16:48] 2025-12-17 12:16:18,169 | INFO     | [job] retrieve thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:18,170 | INFO     | [job] queue monitor thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:18,171 | INFO     | [job] job monitor thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:18,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 07:16:48] 2025-12-17 12:16:18,455 | INFO     | all job control threads have been joined
[2025-12-17 07:16:48] 2025-12-17 12:16:18,762 | INFO     | [payload] validate_post thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,031 | INFO     | [payload] control thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,150 | INFO     | [job] validate thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,157 | INFO     | [data] control thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,163 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,167 | INFO     | [data] copytool_out thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,279 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,375 | INFO     | [data] copytool_in thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,433 | INFO     | [payload] failed_post thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,461 | INFO     | [job] control thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:19,632 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:22,378 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:22,985 | INFO     | [monitor] cgroup control has ended
[2025-12-17 07:16:48] 2025-12-17 12:16:27,890 | INFO     | job.realtimelogging is not enabled
[2025-12-17 07:16:48] 2025-12-17 12:16:28,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 07:16:48] 2025-12-17 12:16:29,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407086171968)>', '<ExcThread(monitor, started 140406859253504)>']
[2025-12-17 07:16:48] 2025-12-17 12:16:34,201 | INFO     | all workflow threads have been joined
[2025-12-17 07:16:48] 2025-12-17 12:16:34,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 07:16:48] 2025-12-17 12:16:34,207 | INFO     | traces error code: 0
[2025-12-17 07:16:48] 2025-12-17 12:16:34,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 07:16:48] 2025-12-17 12:16:47,683 | INFO     | PID=19599 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 07:16:48] 2025-12-17 12:16:47,684 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 07:16:48] 2025-12-17 12:16:47,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 07:16:48] 2025-12-17 12:16:47,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 07:16:48] 2025-12-17 12:16:47,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 07:16:48] 2025-12-17 12:16:47,685 | INFO     | [monitor] control thread has ended
[2025-12-17 07:16:48] 2025-12-17 12:16:47,791 [wrapper] ==== pilot stdout END ====
[2025-12-17 07:16:48] 2025-12-17 12:16:47,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 07:16:48] 2025-12-17 12:16:47,801 [wrapper] pilotpid: 19599
[2025-12-17 07:16:48] 2025-12-17 12:16:47,806 [wrapper] Pilot exit status: 0
[2025-12-17 07:16:48] 2025-12-17 12:16:47,825 [wrapper] pandaids: 6932080584
[2025-12-17 07:16:48] 2025-12-17 12:16:47,870 [wrapper] cleanup supervisor_pilot 19726 19600
[2025-12-17 07:16:48] 2025-12-17 12:16:47,875 [wrapper] Test setup, not cleaning
[2025-12-17 07:16:48] 2025-12-17 12:16:47,879 [wrapper] apfmon messages muted
[2025-12-17 07:16:48] 2025-12-17 12:16:47,884 [wrapper] ==== wrapper stdout END ====
[2025-12-17 07:16:48] 2025-12-17 12:16:47,889 [wrapper] ==== wrapper stderr END ====
[2025-12-17 07:16:48]  *** Error codes and diagnostics ***
[2025-12-17 07:16:48]     "exeErrorCode": 0,
[2025-12-17 07:16:48]     "exeErrorDiag": "",
[2025-12-17 07:16:48]     "pilotErrorCode": 0,
[2025-12-17 07:16:48]     "pilotErrorDiag": "",
[2025-12-17 07:16:48]  *** Listing of results directory ***
[2025-12-17 07:16:48] total 650764
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 07:16:48] -rwx------ 1 boincer umatlas     36322 Dec 16 22:50 runpilot2-wrapper.sh
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas       100 Dec 17 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 07:16:48] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 03:57 run_atlas
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas       105 Dec 17 03:57 job.xml
[2025-12-17 07:16:48] -rw-r--r-- 2 boincer umatlas 338555150 Dec 17 03:57 EVNT.47928818._000002.pool.root.1
[2025-12-17 07:16:48] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 03:57 start_atlas.sh
[2025-12-17 07:16:48] drwxrwx--x 2 boincer umatlas      4096 Dec 17 03:57 shared
[2025-12-17 07:16:48] -rw-r--r-- 2 boincer umatlas    592395 Dec 17 03:57 input.tar.gz
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas         0 Dec 17 03:57 boinc_lockfile
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas      2562 Dec 17 03:57 pandaJob.out
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas        57 Dec 17 03:57 setup.sh.local
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas    987417 Dec 17 03:58 agis_schedconf.cvmfs.json
[2025-12-17 07:16:48] drwx------ 5 boincer umatlas      4096 Dec 17 03:58 pilot3
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas      5910 Dec 17 07:13 init_data.xml
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas 319756494 Dec 17 07:15 HITS.47928820._000043.pool.root.1
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas       532 Dec 17 07:15 boinc_task_state.xml
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas      1050 Dec 17 07:16 memory_monitor_summary.json
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas   1516240 Dec 17 07:16 agis_ddmendpoints.agis.ALL.json
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas    434746 Dec 17 07:16 log.47928820._000043.job.log.tgz.1
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas      7831 Dec 17 07:16 heartbeat.json
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 07:16 boinc_mmap_file
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas        28 Dec 17 07:16 wrapper_checkpoint.txt
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas        95 Dec 17 07:16 pilot_heartbeat.json
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas       745 Dec 17 07:16 pilotlog.txt
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas   1644326 Dec 17 07:16 log.47928820._000043.job.log.1
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas       357 Dec 17 07:16 output.list
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas       620 Dec 17 07:16 runtime_log
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas   2099200 Dec 17 07:16 result.tar.gz
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas       661 Dec 17 07:16 7pFLDmNjxp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJqWKDm01GeIo.diag
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas      9338 Dec 17 07:16 runtime_log.err
[2025-12-17 07:16:48] -rw-r--r-- 1 boincer umatlas     21162 Dec 17 07:16 stderr.txt
[2025-12-17 07:16:48] HITS file was successfully produced:
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas 319756494 Dec 17 07:15 shared/HITS.pool.root.1
[2025-12-17 07:16:48]  *** Contents of shared directory: ***
[2025-12-17 07:16:48] total 645536
[2025-12-17 07:16:48] -rw-r--r-- 2 boincer umatlas 338555150 Dec 17 03:57 ATLAS.root_0
[2025-12-17 07:16:48] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 03:57 start_atlas.sh
[2025-12-17 07:16:48] -rw-r--r-- 2 boincer umatlas    592395 Dec 17 03:57 input.tar.gz
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas 319756494 Dec 17 07:15 HITS.pool.root.1
[2025-12-17 07:16:48] -rw------- 1 boincer umatlas   2099200 Dec 17 07:16 result.tar.gz
07:16:49 (15925): run_atlas exited; CPU time 89820.458146
07:16:49 (15925): called boinc_finish(0)

</stderr_txt>
]]>

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