Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:03:08 (21764): wrapper (7.7.26015): starting
15:03:08 (21764): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 15:03:08] Arguments: --nthreads 8
[2025-12-17 15:03:08] Threads: 8
[2025-12-17 15:03:08] Checking for CVMFS
[2025-12-17 15:03:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 15:03:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 15:03:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 15:03:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 15:03:10] 2.11.2.0 1190 1735 71504 154112 1 258 22824553 25165824 4512 130560 0 1421652 99.948 350868 2901 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-17 15:03:10] CVMFS is ok
[2025-12-17 15:03:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 15:03:10] Checking for apptainer binary...
[2025-12-17 15:03:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 15:03:10] Running /usr/bin/apptainer --version
[2025-12-17 15:03:10] apptainer version 1.3.2-1.el7
[2025-12-17 15:03:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 15:03:33] cg-vwn395.simple-grid.lan
[2025-12-17 15:03:33] apptainer works
[2025-12-17 15:03:33] Set ATHENA_PROC_NUMBER=8
[2025-12-17 15:03:33] Set ATHENA_CORE_NUMBER=8
[2025-12-17 15:03:33] Starting ATLAS job with PandaID=6932080486
[2025-12-17 15:03:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 21:45:33]  *** The last 200 lines of the pilot log: ***
[2025-12-17 21:45:33] 2025-12-17 20:44:50,213 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 21:45:33] 2025-12-17 20:44:50,214 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-17 21:45:33] 2025-12-17 20:44:50,216 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6932080486/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,217 | INFO     | extracted standard info from prmon json
[2025-12-17 21:45:33] 2025-12-17 20:44:50,217 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 21:45:33] 2025-12-17 20:44:50,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 21:45:33] 2025-12-17 20:44:50,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 21:45:33] 2025-12-17 20:44:50,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 21:45:33] 2025-12-17 20:44:50,232 | INFO     | fitting pss+swap vs Time
[2025-12-17 21:45:33] 2025-12-17 20:44:50,233 | INFO     | sum of square deviations: 17420948032.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,238 | INFO     | sum of deviations: -124435837848.00005
[2025-12-17 21:45:33] 2025-12-17 20:44:50,238 | INFO     | mean x: 1765992509.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,238 | INFO     | mean y: 2662066.866840731
[2025-12-17 21:45:33] 2025-12-17 20:44:50,238 | INFO     | intersect: 12616944428.943218
[2025-12-17 21:45:33] 2025-12-17 20:44:50,239 | INFO     | chi2: 5.662252996544983
[2025-12-17 21:45:33] 2025-12-17 20:44:50,239 | INFO     | sum of square deviations: 16747530754.5
[2025-12-17 21:45:33] 2025-12-17 20:44:50,244 | INFO     | sum of deviations: -93216438160.50002
[2025-12-17 21:45:33] 2025-12-17 20:44:50,244 | INFO     | mean x: 1765992356.5
[2025-12-17 21:45:33] 2025-12-17 20:44:50,244 | INFO     | mean y: 2669074.7804232803
[2025-12-17 21:45:33] 2025-12-17 20:44:50,244 | INFO     | intersect: 9832148996.611008
[2025-12-17 21:45:33] 2025-12-17 20:44:50,245 | INFO     | chi2: 4.918347099121441
[2025-12-17 21:45:33] 2025-12-17 20:44:50,245 | INFO     | current chi2=4.918347099121441 (change=13.137984082969481 %)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,245 | INFO     | right removable region: 377
[2025-12-17 21:45:33] 2025-12-17 20:44:50,246 | INFO     | sum of square deviations: 16747530754.5
[2025-12-17 21:45:33] 2025-12-17 20:44:50,250 | INFO     | sum of deviations: -256935973235.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,250 | INFO     | mean x: 1765992661.5
[2025-12-17 21:45:33] 2025-12-17 20:44:50,250 | INFO     | mean y: 2692041.994708995
[2025-12-17 21:45:33] 2025-12-17 20:44:50,250 | INFO     | intersect: 27096061796.604668
[2025-12-17 21:45:33] 2025-12-17 20:44:50,251 | INFO     | chi2: 1.6864103084426636
[2025-12-17 21:45:33] 2025-12-17 20:44:50,251 | INFO     | current chi2=1.6864103084426636 (change=70.2166203193025 %)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,252 | INFO     | sum of square deviations: 16091695202.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,256 | INFO     | sum of deviations: -292979977510.99994
[2025-12-17 21:45:33] 2025-12-17 20:44:50,256 | INFO     | mean x: 1765992814.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,256 | INFO     | mean y: 2700386.040214477
[2025-12-17 21:45:33] 2025-12-17 20:44:50,256 | INFO     | intersect: 32155965062.965054
[2025-12-17 21:45:33] 2025-12-17 20:44:50,257 | INFO     | chi2: 1.1795810417091903
[2025-12-17 21:45:33] 2025-12-17 20:44:50,257 | INFO     | current chi2=1.1795810417091903 (change=30.053733910195973 %)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,258 | INFO     | sum of square deviations: 15453208812.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,262 | INFO     | sum of deviations: -301478959098.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,262 | INFO     | mean x: 1765992966.5
[2025-12-17 21:45:33] 2025-12-17 20:44:50,262 | INFO     | mean y: 2702402.3695652173
[2025-12-17 21:45:33] 2025-12-17 20:44:50,262 | INFO     | intersect: 34455722988.06002
[2025-12-17 21:45:33] 2025-12-17 20:44:50,263 | INFO     | chi2: 1.0915580828798246
[2025-12-17 21:45:33] 2025-12-17 20:44:50,263 | INFO     | current chi2=1.0915580828798246 (change=7.4622222396709725 %)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,263 | INFO     | left removable region: 30
[2025-12-17 21:45:33] 2025-12-17 20:44:50,263 | INFO     | sum of square deviations: 12955770358.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,267 | INFO     | sum of deviations: -253905450413.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,267 | INFO     | mean x: 1765993241.0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,267 | INFO     | mean y: 2706977.6426512967
[2025-12-17 21:45:33] 2025-12-17 20:44:50,267 | INFO     | intersect: 34612405736.739685
[2025-12-17 21:45:33] 2025-12-17 20:44:50,268 | INFO     | chi2: 0.2839696407965346
[2025-12-17 21:45:33] 2025-12-17 20:44:50,268 | INFO     | current memory leak: -19.60 B/s (using 347 data points, chi2=0.28)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,269 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,269 | INFO     | ..............................
[2025-12-17 21:45:33] 2025-12-17 20:44:50,269 | INFO     | . Timing measurements:
[2025-12-17 21:45:33] 2025-12-17 20:44:50,269 | INFO     | . get job = 0 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,269 | INFO     | . initial setup = 4 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,270 | INFO     | . payload setup = 117 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,270 | INFO     | . stage-in = 0 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,270 | INFO     | . payload execution = 23474 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,270 | INFO     | . stage-out = 3 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,270 | INFO     | . log creation = 1 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,270 | INFO     | ..............................
[2025-12-17 21:45:33] 2025-12-17 20:44:50,425 | INFO     | 
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | job summary report
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | --------------------------------------------------
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | PanDA job id: 6932080486
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | task id: 47928788
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | errors: (none)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | pilot state: finished 
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | transexitcode: 0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,426 | INFO     | exeerrorcode: 0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | exeerrordiag: 
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | exitcode: 0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | exitmsg: OK
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | cpuconsumptiontime: 87756 s
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | nevents: 400
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | neventsw: 0
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | pid: 32145
[2025-12-17 21:45:33] 2025-12-17 20:44:50,427 | INFO     | pgrp: 32145
[2025-12-17 21:45:33] 2025-12-17 20:44:50,428 | INFO     | corecount: 8
[2025-12-17 21:45:33] 2025-12-17 20:44:50,428 | INFO     | event service: False
[2025-12-17 21:45:33] 2025-12-17 20:44:50,428 | INFO     | sizes: {0: 2283215, 1: 2283901, 2: 2284100, 12: 2284100, 23: 2284128, 34: 2284156, 45: 2284312, 55: 2284340, 66: 2284368, 77: 2284396, 88: 2284452, 93: 2285022, 98
[2025-12-17 21:45:33] 2025-12-17 20:44:50,428 | INFO     | --------------------------------------------------
[2025-12-17 21:45:33] 2025-12-17 20:44:50,428 | INFO     | 
[2025-12-17 21:45:33] 2025-12-17 20:44:50,428 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-17 21:45:33] 2025-12-17 20:44:50,469 | INFO     | time since job start (23887s) is within the limit (174528.0s)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 21:45:33] 2025-12-17 20:44:50,969 | INFO     | job 6932080486 has completed (purged errors)
[2025-12-17 21:45:33] 2025-12-17 20:44:50,970 | INFO     | overall cleanup function is called
[2025-12-17 21:45:33] 2025-12-17 20:44:51,978 | INFO     | --- collectZombieJob: --- 10, [32145]
[2025-12-17 21:45:33] 2025-12-17 20:44:51,979 | INFO     | zombie collector waiting for pid 32145
[2025-12-17 21:45:33] 2025-12-17 20:44:51,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 21:45:33] 2025-12-17 20:44:51,979 | INFO     | collected zombie processes
[2025-12-17 21:45:33] 2025-12-17 20:44:51,979 | INFO     | will attempt to kill all subprocesses of pid=32145
[2025-12-17 21:45:33] 2025-12-17 20:44:52,128 | INFO     | process IDs to be killed: [32145] (in reverse order)
[2025-12-17 21:45:33] 2025-12-17 20:44:52,977 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 21:45:33] 2025-12-17 20:44:52,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 21:45:33] 2025-12-17 20:44:52,980 | INFO     | did not find any defunct processes belonging to 32145
[2025-12-17 21:45:33] 2025-12-17 20:44:52,983 | INFO     | did not find any defunct processes belonging to 32145
[2025-12-17 21:45:33] 2025-12-17 20:44:52,984 | INFO     | ready for new job
[2025-12-17 21:45:33] 2025-12-17 20:44:52,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 21:45:33] 2025-12-17 20:44:52,987 | INFO     | ***************************************
[2025-12-17 21:45:33] 2025-12-17 20:44:52,987 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 21:45:33] 2025-12-17 20:44:52,987 | INFO     | ***************************************
[2025-12-17 21:45:33] 2025-12-17 20:44:52,987 | INFO     | 
[2025-12-17 21:45:33] 2025-12-17 20:44:52,988 | INFO     | pilot is running in a VM
[2025-12-17 21:45:33] 2025-12-17 20:44:52,988 | INFO     | architecture information:
[2025-12-17 21:45:33] 2025-12-17 20:44:53,002 | INFO     | executing command: cat /etc/os-release
[2025-12-17 21:45:33] 2025-12-17 20:44:53,183 | INFO     | cat /etc/os-release:
[2025-12-17 21:45:33] NAME="CentOS Linux"
[2025-12-17 21:45:33] VERSION="7 (Core)"
[2025-12-17 21:45:33] ID="centos"
[2025-12-17 21:45:33] ID_LIKE="rhel fedora"
[2025-12-17 21:45:33] VERSION_ID="7"
[2025-12-17 21:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 21:45:33] ANSI_COLOR="0;31"
[2025-12-17 21:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 21:45:33] HOME_URL="https://www.centos.org/"
[2025-12-17 21:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 21:45:33] 
[2025-12-17 21:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 21:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 21:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 21:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 21:45:33] 
[2025-12-17 21:45:33] 2025-12-17 20:44:53,183 | INFO     | ***************************************
[2025-12-17 21:45:33] 2025-12-17 20:44:53,686 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-17 21:45:33] 2025-12-17 20:44:53,907 | INFO     | sufficient remaining disk space (495652438016 B)
[2025-12-17 21:45:33] 2025-12-17 20:44:53,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 21:45:33] 2025-12-17 20:44:53,907 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 21:45:33] 2025-12-17 20:44:53,908 | INFO     | update_server=False
[2025-12-17 21:45:33] 2025-12-17 20:44:53,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 21:45:33] 2025-12-17 20:44:53,955 | INFO     | all payload control threads have been joined
[2025-12-17 21:45:33] 2025-12-17 20:44:53,959 | INFO     | all job control threads have been joined
[2025-12-17 21:45:33] 2025-12-17 20:44:53,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 21:45:33] 2025-12-17 20:44:54,531 | INFO     | all data control threads have been joined
[2025-12-17 21:45:33] 2025-12-17 20:44:54,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 21:45:33] 2025-12-17 20:44:54,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:45:33] 2025-12-17 20:44:54,698 | INFO     | aborting loop
[2025-12-17 21:45:33] 2025-12-17 20:44:54,913 | INFO     | [job] retrieve thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:54,961 | INFO     | [payload] control thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:54,965 | INFO     | [job] control thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,026 | INFO     | [job] validate thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,146 | INFO     | [payload] failed_post thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,276 | INFO     | [payload] validate_post thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,433 | INFO     | [data] copytool_in thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:45:33] 2025-12-17 20:44:55,464 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,537 | INFO     | [data] control thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,704 | INFO     | [job] job monitor thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,857 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:55,992 | INFO     | [data] copytool_out thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:56,414 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:56,442 | INFO     | [job] queue monitor thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:44:58,640 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 21:45:33] 2025-12-17 20:45:23,420 | INFO     | [monitor] cgroup control has ended
[2025-12-17 21:45:33] 2025-12-17 20:45:23,645 | INFO     | PID=25553 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 21:45:33] 2025-12-17 20:45:23,645 | INFO     | .. there are 9 such processes running
[2025-12-17 21:45:33] 2025-12-17 20:45:23,646 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 21:45:33] 2025-12-17 20:45:23,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 21:45:33] 2025-12-17 20:45:23,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 21:45:33] 2025-12-17 20:45:24,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487081838400)>', '<ExcThread(monitor, started 140486425700096)>']
[2025-12-17 21:45:33] 2025-12-17 20:45:24,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 21:45:33] 2025-12-17 20:45:24,652 | INFO     | [monitor] control thread has ended
[2025-12-17 21:45:33] 2025-12-17 20:45:29,141 | INFO     | all workflow threads have been joined
[2025-12-17 21:45:33] 2025-12-17 20:45:29,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 21:45:33] 2025-12-17 20:45:29,142 | INFO     | traces error code: 0
[2025-12-17 21:45:33] 2025-12-17 20:45:29,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 21:45:33] 2025-12-17 20:45:29,483 [wrapper] ==== pilot stdout END ====
[2025-12-17 21:45:33] 2025-12-17 20:45:29,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 21:45:33] 2025-12-17 20:45:29,681 [wrapper] pilotpid: 25553
[2025-12-17 21:45:33] 2025-12-17 20:45:29,774 [wrapper] Pilot exit status: 0
[2025-12-17 21:45:33] 2025-12-17 20:45:30,257 [wrapper] pandaids: 6932080486
[2025-12-17 21:45:33] 2025-12-17 20:45:31,128 [wrapper] cleanup supervisor_pilot 13718 25554
[2025-12-17 21:45:33] 2025-12-17 20:45:31,227 [wrapper] Test setup, not cleaning
[2025-12-17 21:45:33] 2025-12-17 20:45:31,316 [wrapper] apfmon messages muted
[2025-12-17 21:45:33] 2025-12-17 20:45:31,399 [wrapper] ==== wrapper stdout END ====
[2025-12-17 21:45:33] 2025-12-17 20:45:31,444 [wrapper] ==== wrapper stderr END ====
[2025-12-17 21:45:33]  *** Error codes and diagnostics ***
[2025-12-17 21:45:33]     "exeErrorCode": 0,
[2025-12-17 21:45:33]     "exeErrorDiag": "",
[2025-12-17 21:45:33]     "pilotErrorCode": 0,
[2025-12-17 21:45:33]     "pilotErrorDiag": "",
[2025-12-17 21:45:33]  *** Listing of results directory ***
[2025-12-17 21:45:33] total 623944
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc    579449 Dec 17 04:48 pilot3.tar.gz
[2025-12-17 21:45:33] -rwx------. 1 boinc boinc     36322 Dec 17 04:50 runpilot2-wrapper.sh
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc      5112 Dec 17 04:50 queuedata.json
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc       100 Dec 17 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 21:45:33] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 15:03 run_atlas
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc       105 Dec 17 15:03 job.xml
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc      6390 Dec 17 15:03 init_data.xml
[2025-12-17 21:45:33] -rw-r--r--. 2 boinc boinc 328866302 Dec 17 15:03 EVNT.47928786._000002.pool.root.1
[2025-12-17 21:45:33] -rw-r--r--. 2 boinc boinc     15847 Dec 17 15:03 start_atlas.sh
[2025-12-17 21:45:33] drwxrwx--x. 2 boinc boinc        68 Dec 17 15:03 shared
[2025-12-17 21:45:33] -rw-r--r--. 2 boinc boinc    592405 Dec 17 15:03 input.tar.gz
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc         0 Dec 17 15:03 boinc_lockfile
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc      2575 Dec 17 15:03 pandaJob.out
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc    987423 Dec 17 15:06 agis_schedconf.cvmfs.json
[2025-12-17 21:45:33] drwx------. 5 boinc boinc      4096 Dec 17 15:06 pilot3
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc 298592931 Dec 17 21:41 HITS.47928788._000045.pool.root.1
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc       531 Dec 17 21:41 boinc_task_state.xml
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc      1021 Dec 17 21:43 memory_monitor_summary.json
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc   1516240 Dec 17 21:43 agis_ddmendpoints.agis.ALL.json
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc    593457 Dec 17 21:43 log.47928788._000045.job.log.tgz.1
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc      7776 Dec 17 21:44 heartbeat.json
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc      8192 Dec 17 21:45 boinc_mmap_file
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc        28 Dec 17 21:45 wrapper_checkpoint.txt
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc        95 Dec 17 21:45 pilot_heartbeat.json
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc      4885 Dec 17 21:45 pilotlog.txt
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc   3185698 Dec 17 21:45 log.47928788._000045.job.log.1
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc       357 Dec 17 21:45 output.list
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc       620 Dec 17 21:45 runtime_log
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc   3799040 Dec 17 21:45 result.tar.gz
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc       658 Dec 17 21:45 WWqKDmEjxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4KbKDmGxfAwn.diag
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc      8833 Dec 17 21:45 runtime_log.err
[2025-12-17 21:45:33] -rw-r--r--. 1 boinc boinc     20782 Dec 17 21:45 stderr.txt
[2025-12-17 21:45:33] HITS file was successfully produced:
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc 298592931 Dec 17 21:41 shared/HITS.pool.root.1
[2025-12-17 21:45:33]  *** Contents of shared directory: ***
[2025-12-17 21:45:33] total 617064
[2025-12-17 21:45:33] -rw-r--r--. 2 boinc boinc 328866302 Dec 17 15:03 ATLAS.root_0
[2025-12-17 21:45:33] -rw-r--r--. 2 boinc boinc     15847 Dec 17 15:03 start_atlas.sh
[2025-12-17 21:45:33] -rw-r--r--. 2 boinc boinc    592405 Dec 17 15:03 input.tar.gz
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc 298592931 Dec 17 21:41 HITS.pool.root.1
[2025-12-17 21:45:33] -rw-------. 1 boinc boinc   3799040 Dec 17 21:45 result.tar.gz
21:45:35 (21764): run_atlas exited; CPU time 88094.976989
21:45:35 (21764): called boinc_finish(0)

</stderr_txt>
]]>

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