Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:26:59 (1654903): wrapper (7.7.26015): starting
19:26:59 (1654903): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 19:26:59] Arguments: --nthreads 3
[2025-12-17 19:26:59] Threads: 3
[2025-12-17 19:26:59] Checking for CVMFS
[2025-12-17 19:27:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 19:27:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 19:27:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 19:27:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 19:27:00] 2.9.2.0 19183 6559 70744 154119 3 57 32214582 36864000 0 130560 0 4314697 99.989 240741 7650 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 19:27:00] CVMFS is ok
[2025-12-17 19:27:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 19:27:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 19:27:00] Further information can be found at the LHC@home message board.
[2025-12-17 19:27:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 19:27:00] Checking for apptainer binary...
[2025-12-17 19:27:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 19:27:00] Running /usr/bin/apptainer --version
[2025-12-17 19:27:00] apptainer version 1.4.1-1.1
[2025-12-17 19:27:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 19:27:00] magicA244b
[2025-12-17 19:27:00] apptainer works
[2025-12-17 19:27:00] Set ATHENA_PROC_NUMBER=3
[2025-12-17 19:27:00] Set ATHENA_CORE_NUMBER=3
[2025-12-17 19:27:00] Starting ATLAS job with PandaID=6932080416
[2025-12-17 19:27:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 21:38:28]  *** The last 200 lines of the pilot log: ***
[2025-12-17 21:38:28] 2025-12-17 20:37:55,878 | INFO     | all data control threads have been joined
[2025-12-17 21:38:28] 2025-12-17 20:37:55,885 | INFO     | [job] job monitor thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:55,886 | INFO     | [job] retrieve thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:55,925 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:55,937 | INFO     | [job] control thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:56,015 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:56,046 | INFO     | [data] copytool_in thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:56,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 21:38:28] 2025-12-17 20:37:56,339 | INFO     | all payload control threads have been joined
[2025-12-17 21:38:28] 2025-12-17 20:37:56,749 | INFO     | [payload] validate_post thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:56,884 | INFO     | [data] control thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:57,037 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:57,050 | INFO     | [job] validate thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:57,345 | INFO     | [payload] control thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:57,357 | INFO     | [payload] failed_post thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:57,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 21:38:28] 2025-12-17 20:37:58,266 | INFO     | [data] copytool_out thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:58,799 | INFO     | [job] queue monitor thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:37:58,887 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:38:05,667 | INFO     | job.realtimelogging is not enabled
[2025-12-17 21:38:28] 2025-12-17 20:38:06,671 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 21:38:28] 2025-12-17 20:38:22,529 | INFO     | [monitor] cgroup control has ended
[2025-12-17 21:38:28] 2025-12-17 20:38:23,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840344188736)>', '<ExcThread(monitor, started 139839605290752)>']
[2025-12-17 21:38:28] 2025-12-17 20:38:24,553 | INFO     | PID=1658630 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 21:38:28] 2025-12-17 20:38:24,553 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 21:38:28] 2025-12-17 20:38:24,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 21:38:28] 2025-12-17 20:38:24,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 21:38:28] 2025-12-17 20:38:24,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 21:38:28] 2025-12-17 20:38:24,553 | INFO     | [monitor] control thread has ended
[2025-12-17 21:38:28] 2025-12-17 20:38:28,485 | INFO     | all workflow threads have been joined
[2025-12-17 21:38:28] 2025-12-17 20:38:28,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 21:38:28] 2025-12-17 20:38:28,486 | INFO     | traces error code: 0
[2025-12-17 21:38:28] 2025-12-17 20:38:28,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 21:38:28] 2025-12-17 20:38:28,533 [wrapper] ==== pilot stdout END ====
[2025-12-17 21:38:28] 2025-12-17 20:38:28,536 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 21:38:28] 2025-12-17 20:38:28,539 [wrapper] pilotpid: 1658630
[2025-12-17 21:38:28] 2025-12-17 20:38:28,541 [wrapper] Pilot exit status: 0
[2025-12-17 21:38:28] 2025-12-17 20:38:28,548 [wrapper] pandaids: 6932080416
[2025-12-17 21:38:28] 2025-12-17 20:38:28,564 [wrapper] cleanup supervisor_pilot 1679588 1658631
[2025-12-17 21:38:28] 2025-12-17 20:38:28,567 [wrapper] Test setup, not cleaning
[2025-12-17 21:38:28] 2025-12-17 20:38:28,570 [wrapper] apfmon messages muted
[2025-12-17 21:38:28] 2025-12-17 20:38:28,573 [wrapper] ==== wrapper stdout END ====
[2025-12-17 21:38:28] 2025-12-17 20:38:28,575 [wrapper] ==== wrapper stderr END ====
[2025-12-17 21:38:28]  *** Error codes and diagnostics ***
[2025-12-17 21:38:28]     "exeErrorCode": 0,
[2025-12-17 21:38:28]     "exeErrorDiag": "",
[2025-12-17 21:38:28]     "pilotErrorCode": 0,
[2025-12-17 21:38:28]     "pilotErrorDiag": "",
[2025-12-17 21:38:28]  *** Listing of results directory ***
[2025-12-17 21:38:28] total 399260
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc    579449 Dec 17 04:48 pilot3.tar.gz
[2025-12-17 21:38:28] -rwx------ 1 boinc boinc     36322 Dec 17 04:50 runpilot2-wrapper.sh
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc      5112 Dec 17 04:50 queuedata.json
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc       100 Dec 17 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 21:38:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 19:26 run_atlas
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc       105 Dec 17 19:26 job.xml
[2025-12-17 21:38:28] -rw-r--r-- 2 boinc boinc 200334900 Dec 17 19:26 EVNT.47905897._000009.pool.root.1
[2025-12-17 21:38:28] -rw-r--r-- 2 boinc boinc    592383 Dec 17 19:26 input.tar.gz
[2025-12-17 21:38:28] -rw-r--r-- 2 boinc boinc     15847 Dec 17 19:26 start_atlas.sh
[2025-12-17 21:38:28] drwxrwx--x 2 boinc boinc      4096 Dec 17 19:26 shared
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc         0 Dec 17 19:26 boinc_setup_complete
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc      6199 Dec 17 19:26 init_data.xml
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc         0 Dec 17 19:26 boinc_lockfile
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc      2482 Dec 17 19:27 pandaJob.out
[2025-12-17 21:38:28] -rw------- 1 boinc boinc    988136 Dec 17 19:27 agis_schedconf.cvmfs.json
[2025-12-17 21:38:28] -rw------- 1 boinc boinc   1516240 Dec 17 19:27 agis_ddmendpoints.agis.ALL.json
[2025-12-17 21:38:28] drwx------ 5 boinc boinc      4096 Dec 17 19:27 pilot3
[2025-12-17 21:38:28] -rw------- 1 boinc boinc 201758448 Dec 17 21:37 HITS.47905899._000215.pool.root.1
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc       529 Dec 17 21:37 boinc_task_state.xml
[2025-12-17 21:38:28] -rw------- 1 boinc boinc      1016 Dec 17 21:37 memory_monitor_summary.json
[2025-12-17 21:38:28] -rw------- 1 boinc boinc    299447 Dec 17 21:37 log.47905899._000215.job.log.tgz.1
[2025-12-17 21:38:28] -rw------- 1 boinc boinc        95 Dec 17 21:37 pilot_heartbeat.json
[2025-12-17 21:38:28] -rw------- 1 boinc boinc      7758 Dec 17 21:37 heartbeat.json
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc      8192 Dec 17 21:37 boinc_mmap_file
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc        27 Dec 17 21:37 wrapper_checkpoint.txt
[2025-12-17 21:38:28] -rw------- 1 boinc boinc      4824 Dec 17 21:38 pilotlog.txt
[2025-12-17 21:38:28] -rw------- 1 boinc boinc   1126029 Dec 17 21:38 log.47905899._000215.job.log.1
[2025-12-17 21:38:28] -rw------- 1 boinc boinc       357 Dec 17 21:38 output.list
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc       620 Dec 17 21:38 runtime_log
[2025-12-17 21:38:28] -rw------- 1 boinc boinc   1443840 Dec 17 21:38 result.tar.gz
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc      8917 Dec 17 21:38 runtime_log.err
[2025-12-17 21:38:28] -rw------- 1 boinc boinc       663 Dec 17 21:38 AcnNDmDjxp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFKbKDmbfTgJm.diag
[2025-12-17 21:38:28] -rw-r--r-- 1 boinc boinc      6858 Dec 17 21:38 stderr.txt
[2025-12-17 21:38:28] HITS file was successfully produced:
[2025-12-17 21:38:28] -rw------- 1 boinc boinc 201758448 Dec 17 21:37 shared/HITS.pool.root.1
[2025-12-17 21:38:28]  *** Contents of shared directory: ***
[2025-12-17 21:38:28] total 394688
[2025-12-17 21:38:28] -rw-r--r-- 2 boinc boinc 200334900 Dec 17 19:26 ATLAS.root_0
[2025-12-17 21:38:28] -rw-r--r-- 2 boinc boinc    592383 Dec 17 19:26 input.tar.gz
[2025-12-17 21:38:28] -rw-r--r-- 2 boinc boinc     15847 Dec 17 19:26 start_atlas.sh
[2025-12-17 21:38:28] -rw------- 1 boinc boinc 201758448 Dec 17 21:37 HITS.pool.root.1
[2025-12-17 21:38:28] -rw------- 1 boinc boinc   1443840 Dec 17 21:38 result.tar.gz
21:38:30 (1654903): run_atlas exited; CPU time 22845.256607
21:38:30 (1654903): called boinc_finish(0)

</stderr_txt>
]]>

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