Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:14 (936041): wrapper (7.7.26015): starting
03:46:14 (936041): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 03:46:14] Arguments: --nthreads 8
[2025-12-17 03:46:14] Threads: 8
[2025-12-17 03:46:14] Checking for CVMFS
[2025-12-17 03:46:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:46:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:46:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:46:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:46:35] 2.13.3.0 11235 58372 254928 154105 0 772 26799239 32935937 35825 16776704 0 544240627 99.560 593096520 18201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 03:46:35] CVMFS is ok
[2025-12-17 03:46:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 03:46:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 03:46:35] Further information can be found at the LHC@home message board.
[2025-12-17 03:46:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:46:35] Checking for apptainer binary...
[2025-12-17 03:46:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:46:35] Running /usr/bin/apptainer --version
[2025-12-17 03:46:36] apptainer version 1.4.5-2.el9
[2025-12-17 03:46:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:46:36] c7-2-37.aglt2.org
[2025-12-17 03:46:36] apptainer works
[2025-12-17 03:46:36] Set ATHENA_PROC_NUMBER=8
[2025-12-17 03:46:36] Set ATHENA_CORE_NUMBER=8
[2025-12-17 03:46:36] Starting ATLAS job with PandaID=6932080296
[2025-12-17 03:46:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 08:24:11]  *** The last 200 lines of the pilot log: ***
[2025-12-17 08:24:11] 2025-12-17 13:23:28,833 | INFO     | monitor loop #941: job 0:6932080296 is in state 'finished'
[2025-12-17 08:24:11] 2025-12-17 13:23:28,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 08:24:11] 2025-12-17 13:23:30,830 | INFO     | time since job start (16573s) is within the limit (174528.0s)
[2025-12-17 08:24:11] 2025-12-17 13:23:31,337 | INFO     | monitor loop #942: job 0:6932080296 is in state 'finished'
[2025-12-17 08:24:11] 2025-12-17 13:23:31,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 08:24:11] 2025-12-17 13:23:32,837 | INFO     | time since job start (16575s) is within the limit (174528.0s)
[2025-12-17 08:24:11] 2025-12-17 13:23:33,841 | INFO     | monitor loop #943: job 0:6932080296 is in state 'finished'
[2025-12-17 08:24:11] 2025-12-17 13:23:33,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,774 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 08:24:11] 2025-12-17 13:23:34,786 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3162.3772395833334
[2025-12-17 08:24:11] 2025-12-17 13:23:34,801 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6932080296/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,802 | INFO     | extracted standard info from prmon json
[2025-12-17 08:24:11] 2025-12-17 13:23:34,802 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 08:24:11] 2025-12-17 13:23:34,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 08:24:11] 2025-12-17 13:23:34,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 08:24:11] 2025-12-17 13:23:34,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 08:24:11] 2025-12-17 13:23:34,840 | INFO     | fitting pss+swap vs Time
[2025-12-17 08:24:11] 2025-12-17 13:23:34,841 | INFO     | sum of square deviations: 6171459739.697384
[2025-12-17 08:24:11] 2025-12-17 13:23:34,864 | INFO     | time since job start (16577s) is within the limit (174528.0s)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,869 | INFO     | sum of deviations: 65286644897.57199
[2025-12-17 08:24:11] 2025-12-17 13:23:34,869 | INFO     | mean x: 1765969517.3505535
[2025-12-17 08:24:11] 2025-12-17 13:23:34,870 | INFO     | mean y: 2467315.5202952027
[2025-12-17 08:24:11] 2025-12-17 13:23:34,870 | INFO     | intersect: -18679372904.15772
[2025-12-17 08:24:11] 2025-12-17 13:23:34,870 | INFO     | chi2: 3.8173265279015816
[2025-12-17 08:24:11] 2025-12-17 13:23:34,870 | INFO     | sum of square deviations: 5836144965.281947
[2025-12-17 08:24:11] 2025-12-17 13:23:34,894 | INFO     | sum of deviations: 82913225761.42104
[2025-12-17 08:24:11] 2025-12-17 13:23:34,895 | INFO     | mean x: 1765969364.8533835
[2025-12-17 08:24:11] 2025-12-17 13:23:34,895 | INFO     | mean y: 2475203.4210526315
[2025-12-17 08:24:11] 2025-12-17 13:23:34,895 | INFO     | intersect: -25086383539.272667
[2025-12-17 08:24:11] 2025-12-17 13:23:34,895 | INFO     | chi2: 2.977870897482987
[2025-12-17 08:24:11] 2025-12-17 13:23:34,895 | INFO     | current chi2=2.977870897482987 (change=21.990668712326556 %)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,896 | INFO     | right removable region: 265
[2025-12-17 08:24:11] 2025-12-17 13:23:34,896 | INFO     | sum of square deviations: 5836103546.571417
[2025-12-17 08:24:11] 2025-12-17 13:23:34,897 | INFO     | sum of deviations: -6104216242.857143
[2025-12-17 08:24:11] 2025-12-17 13:23:34,897 | INFO     | mean x: 1765969669.857143
[2025-12-17 08:24:11] 2025-12-17 13:23:34,898 | INFO     | mean y: 2499670.5037593986
[2025-12-17 08:24:11] 2025-12-17 13:23:34,898 | INFO     | intersect: 1849598622.2466514
[2025-12-17 08:24:11] 2025-12-17 13:23:34,898 | INFO     | chi2: 0.9846630778875021
[2025-12-17 08:24:11] 2025-12-17 13:23:34,898 | INFO     | current chi2=0.9846630778875021 (change=74.20542700001144 %)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,898 | INFO     | sum of square deviations: 5513119678.42147
[2025-12-17 08:24:11] 2025-12-17 13:23:34,920 | INFO     | sum of deviations: -19014007222.563217
[2025-12-17 08:24:11] 2025-12-17 13:23:34,920 | INFO     | mean x: 1765969822.3639846
[2025-12-17 08:24:11] 2025-12-17 13:23:34,920 | INFO     | mean y: 2505747.195402299
[2025-12-17 08:24:11] 2025-12-17 13:23:34,920 | INFO     | intersect: 6093097810.466495
[2025-12-17 08:24:11] 2025-12-17 13:23:34,921 | INFO     | chi2: 0.892820737351751
[2025-12-17 08:24:11] 2025-12-17 13:23:34,921 | INFO     | current chi2=0.892820737351751 (change=9.32728591111487 %)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,921 | INFO     | left removable region: 20
[2025-12-17 08:24:11] 2025-12-17 13:23:34,921 | INFO     | sum of square deviations: 4560120334.938794
[2025-12-17 08:24:11] 2025-12-17 13:23:34,958 | INFO     | sum of deviations: 3755525601.5102053
[2025-12-17 08:24:11] 2025-12-17 13:23:34,958 | INFO     | mean x: 1765969944.367347
[2025-12-17 08:24:11] 2025-12-17 13:23:34,958 | INFO     | mean y: 2512442.53877551
[2025-12-17 08:24:11] 2025-12-17 13:23:34,958 | INFO     | intersect: -1451867014.6774871
[2025-12-17 08:24:11] 2025-12-17 13:23:34,959 | INFO     | chi2: 0.013489882271861013
[2025-12-17 08:24:11] 2025-12-17 13:23:34,959 | INFO     | current memory leak: 0.82 B/s (using 245 data points, chi2=0.01)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,960 | INFO     | could have reported an average CPU frequency of 3237 MHz (13 samples)
[2025-12-17 08:24:11] 2025-12-17 13:23:34,960 | INFO     | ..............................
[2025-12-17 08:24:11] 2025-12-17 13:23:34,960 | INFO     | . Timing measurements:
[2025-12-17 08:24:11] 2025-12-17 13:23:34,960 | INFO     | . get job = 0 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | . initial setup = 3 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | . payload setup = 11 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | . stage-in = 0 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | . payload execution = 16528 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | . stage-out = 3 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | . log creation = 0 s
[2025-12-17 08:24:11] 2025-12-17 13:23:34,961 | INFO     | ..............................
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | 
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | job summary report
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | --------------------------------------------------
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | PanDA job id: 6932080296
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | task id: 47905890
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | errors: (none)
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 08:24:11] 2025-12-17 13:23:35,266 | INFO     | pilot state: finished 
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | transexitcode: 0
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | exeerrorcode: 0
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | exeerrordiag: 
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | exitcode: 0
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | exitmsg: OK
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | cpuconsumptiontime: 43616 s
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | nevents: 400
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | neventsw: 0
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | pid: 966252
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | pgrp: 966252
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | corecount: 8
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | event service: False
[2025-12-17 08:24:11] 2025-12-17 13:23:35,267 | INFO     | sizes: {0: 2283042, 1: 2283898, 2: 2283898, 11: 2284188, 12: 2284216, 16546: 2316093, 16550: 2325091, 16552: 2325147, 16559: 2325341}
[2025-12-17 08:24:11] 2025-12-17 13:23:35,268 | INFO     | --------------------------------------------------
[2025-12-17 08:24:11] 2025-12-17 13:23:35,268 | INFO     | 
[2025-12-17 08:24:11] 2025-12-17 13:23:35,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 08:24:11] 2025-12-17 13:23:35,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 08:24:11] 2025-12-17 13:23:35,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 08:24:11] 2025-12-17 13:23:35,406 | INFO     | job 6932080296 has completed (purged errors)
[2025-12-17 08:24:11] 2025-12-17 13:23:35,406 | INFO     | overall cleanup function is called
[2025-12-17 08:24:11] 2025-12-17 13:23:36,435 | INFO     | --- collectZombieJob: --- 10, [966252]
[2025-12-17 08:24:11] 2025-12-17 13:23:36,435 | INFO     | zombie collector waiting for pid 966252
[2025-12-17 08:24:11] 2025-12-17 13:23:36,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 08:24:11] 2025-12-17 13:23:36,435 | INFO     | collected zombie processes
[2025-12-17 08:24:11] 2025-12-17 13:23:36,435 | INFO     | will attempt to kill all subprocesses of pid=966252
[2025-12-17 08:24:11] 2025-12-17 13:23:38,575 | INFO     | process IDs to be killed: [966252] (in reverse order)
[2025-12-17 08:24:11] 2025-12-17 13:23:38,878 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 08:24:11] 2025-12-17 13:23:38,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 08:24:11] 2025-12-17 13:23:38,902 | INFO     | did not find any defunct processes belonging to 966252
[2025-12-17 08:24:11] 2025-12-17 13:23:38,926 | INFO     | did not find any defunct processes belonging to 966252
[2025-12-17 08:24:11] 2025-12-17 13:23:38,926 | INFO     | ready for new job
[2025-12-17 08:24:11] 2025-12-17 13:23:38,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 08:24:11] 2025-12-17 13:23:38,929 | INFO     | ***************************************
[2025-12-17 08:24:11] 2025-12-17 13:23:38,929 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 08:24:11] 2025-12-17 13:23:38,929 | INFO     | ***************************************
[2025-12-17 08:24:11] 2025-12-17 13:23:38,929 | INFO     | 
[2025-12-17 08:24:11] 2025-12-17 13:23:38,977 | INFO     | architecture information:
[2025-12-17 08:24:11] 2025-12-17 13:23:38,986 | INFO     | executing command: cat /etc/os-release
[2025-12-17 08:24:11] 2025-12-17 13:23:39,023 | INFO     | cat /etc/os-release:
[2025-12-17 08:24:11] NAME="CentOS Linux"
[2025-12-17 08:24:11] VERSION="7 (Core)"
[2025-12-17 08:24:11] ID="centos"
[2025-12-17 08:24:11] ID_LIKE="rhel fedora"
[2025-12-17 08:24:11] VERSION_ID="7"
[2025-12-17 08:24:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 08:24:11] ANSI_COLOR="0;31"
[2025-12-17 08:24:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 08:24:11] HOME_URL="https://www.centos.org/"
[2025-12-17 08:24:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 08:24:11] 
[2025-12-17 08:24:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 08:24:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 08:24:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 08:24:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 08:24:11] 
[2025-12-17 08:24:11] 2025-12-17 13:23:39,023 | INFO     | ***************************************
[2025-12-17 08:24:11] 2025-12-17 13:23:39,535 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 08:24:11] 2025-12-17 13:23:39,587 | INFO     | sufficient remaining disk space (73828139008 B)
[2025-12-17 08:24:11] 2025-12-17 13:23:39,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 08:24:11] 2025-12-17 13:23:39,588 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 08:24:11] 2025-12-17 13:23:39,588 | INFO     | update_server=False
[2025-12-17 08:24:11] 2025-12-17 13:23:39,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 08:24:11] 2025-12-17 13:23:39,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 08:24:11] 2025-12-17 13:23:39,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 08:24:11] 2025-12-17 13:23:39,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 08:24:11] 2025-12-17 13:23:39,884 | INFO     | aborting loop
[2025-12-17 08:24:11] 2025-12-17 13:23:39,892 | INFO     | all job control threads have been joined
[2025-12-17 08:24:11] 2025-12-17 13:23:40,308 | INFO     | all payload control threads have been joined
[2025-12-17 08:24:11] 2025-12-17 13:23:40,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 08:24:11] 2025-12-17 13:23:40,584 | INFO     | all data control threads have been joined
[2025-12-17 08:24:11] 2025-12-17 13:23:40,595 | INFO     | [job] retrieve thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:40,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:40,769 | INFO     | [data] copytool_in thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:40,888 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:40,890 | INFO     | [job] job monitor thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:40,918 | INFO     | [job] control thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:40,985 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,169 | INFO     | [job] validate thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,231 | INFO     | [payload] validate_post thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,314 | INFO     | [payload] control thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,344 | INFO     | [job] queue monitor thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,592 | INFO     | [data] control thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,617 | INFO     | [data] copytool_out thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:41,652 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:42,179 | INFO     | [payload] failed_post thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:43,600 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 08:24:11] 2025-12-17 13:23:44,834 | INFO     | [monitor] cgroup control has ended
[2025-12-17 08:24:11] 2025-12-17 13:23:46,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744268314432)>', '<ExcThread(monitor, started 139743908050688)>']
[2025-12-17 08:24:11] 2025-12-17 13:23:51,801 | INFO     | all workflow threads have been joined
[2025-12-17 08:24:11] 2025-12-17 13:23:51,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 08:24:11] 2025-12-17 13:23:51,801 | INFO     | traces error code: 0
[2025-12-17 08:24:11] 2025-12-17 13:23:51,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 08:24:11] 2025-12-17 13:24:10,619 | INFO     | PID=949226 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 08:24:11] 2025-12-17 13:24:10,619 | INFO     | .. there are 46 such processes running
[2025-12-17 08:24:11] 2025-12-17 13:24:10,629 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 08:24:11] 2025-12-17 13:24:10,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 08:24:11] 2025-12-17 13:24:10,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 08:24:11] 2025-12-17 13:24:10,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 08:24:11] 2025-12-17 13:24:10,629 | INFO     | [monitor] control thread has ended
[2025-12-17 08:24:11] 2025-12-17 13:24:10,833 [wrapper] ==== pilot stdout END ====
[2025-12-17 08:24:11] 2025-12-17 13:24:10,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 08:24:11] 2025-12-17 13:24:10,838 [wrapper] pilotpid: 949226
[2025-12-17 08:24:11] 2025-12-17 13:24:10,840 [wrapper] Pilot exit status: 0
[2025-12-17 08:24:11] 2025-12-17 13:24:10,850 [wrapper] pandaids: 6932080296
[2025-12-17 08:24:11] 2025-12-17 13:24:10,969 [wrapper] cleanup supervisor_pilot 3291711 949227
[2025-12-17 08:24:11] 2025-12-17 13:24:10,971 [wrapper] Test setup, not cleaning
[2025-12-17 08:24:11] 2025-12-17 13:24:10,974 [wrapper] apfmon messages muted
[2025-12-17 08:24:11] 2025-12-17 13:24:10,981 [wrapper] ==== wrapper stdout END ====
[2025-12-17 08:24:11] 2025-12-17 13:24:10,985 [wrapper] ==== wrapper stderr END ====
[2025-12-17 08:24:11]  *** Error codes and diagnostics ***
[2025-12-17 08:24:11]     "exeErrorCode": 0,
[2025-12-17 08:24:11]     "exeErrorDiag": "",
[2025-12-17 08:24:11]     "pilotErrorCode": 0,
[2025-12-17 08:24:11]     "pilotErrorDiag": "",
[2025-12-17 08:24:11]  *** Listing of results directory ***
[2025-12-17 08:24:11] total 404040
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 08:24:11] -rwx------. 1 boincer umatlas     36322 Dec 16 22:49 runpilot2-wrapper.sh
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas       100 Dec 17 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 08:24:11] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 03:46 run_atlas
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas       105 Dec 17 03:46 job.xml
[2025-12-17 08:24:11] -rw-r--r--. 2 boincer umatlas 199509827 Dec 17 03:46 EVNT.47905888._000019.pool.root.1
[2025-12-17 08:24:11] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 03:46 shared
[2025-12-17 08:24:11] -rw-r--r--. 2 boincer umatlas    592376 Dec 17 03:46 input.tar.gz
[2025-12-17 08:24:11] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 03:46 start_atlas.sh
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas         0 Dec 17 03:46 boinc_lockfile
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas      2445 Dec 17 03:46 pandaJob.out
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas        57 Dec 17 03:46 setup.sh.local
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas    987417 Dec 17 03:47 agis_schedconf.cvmfs.json
[2025-12-17 08:24:11] drwx------. 5 boincer umatlas      4096 Dec 17 03:47 pilot3
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas      6945 Dec 17 08:21 init_data.xml
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas 205324918 Dec 17 08:22 HITS.47905890._000508.pool.root.1
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas       530 Dec 17 08:22 boinc_task_state.xml
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas      1051 Dec 17 08:23 memory_monitor_summary.json
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas   1516240 Dec 17 08:23 agis_ddmendpoints.agis.ALL.json
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas    472458 Dec 17 08:23 log.47905890._000508.job.log.tgz.1
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas      7792 Dec 17 08:23 heartbeat.json
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas        28 Dec 17 08:24 wrapper_checkpoint.txt
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 08:24 boinc_mmap_file
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas        95 Dec 17 08:24 pilot_heartbeat.json
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas       822 Dec 17 08:24 pilotlog.txt
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas   2021778 Dec 17 08:24 log.47905890._000508.job.log.1
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas       357 Dec 17 08:24 output.list
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas       620 Dec 17 08:24 runtime_log
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas   2508800 Dec 17 08:24 result.tar.gz
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas      9338 Dec 17 08:24 runtime_log.err
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas       658 Dec 17 08:24 m2lKDm4ixp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeIbKDmb2cFhn.diag
[2025-12-17 08:24:11] -rw-r--r--. 1 boincer umatlas     21409 Dec 17 08:24 stderr.txt
[2025-12-17 08:24:11] HITS file was successfully produced:
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas 205324918 Dec 17 08:22 shared/HITS.pool.root.1
[2025-12-17 08:24:11]  *** Contents of shared directory: ***
[2025-12-17 08:24:11] total 398408
[2025-12-17 08:24:11] -rw-r--r--. 2 boincer umatlas 199509827 Dec 17 03:46 ATLAS.root_0
[2025-12-17 08:24:11] -rw-r--r--. 2 boincer umatlas    592376 Dec 17 03:46 input.tar.gz
[2025-12-17 08:24:11] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 03:46 start_atlas.sh
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas 205324918 Dec 17 08:22 HITS.pool.root.1
[2025-12-17 08:24:11] -rw-------. 1 boincer umatlas   2508800 Dec 17 08:24 result.tar.gz
08:24:12 (936041): run_atlas exited; CPU time 44184.883036
08:24:12 (936041): called boinc_finish(0)

</stderr_txt>
]]>

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