Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:22:59 (21179): wrapper (7.7.26015): starting
03:22:59 (21179): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 03:22:59] Arguments: --nthreads 8
[2025-12-17 03:22:59] Threads: 8
[2025-12-17 03:22:59] Checking for CVMFS
[2025-12-17 03:22:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:22:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:22:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:22:59] 2.11.2.0 3733 147694 147680 154105 2 64 13536798 18432000 1832 130560 0 110102690 99.978 6009907 32319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 03:22:59] CVMFS is ok
[2025-12-17 03:22:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 03:22:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 03:22:59] Further information can be found at the LHC@home message board.
[2025-12-17 03:22:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:22:59] Checking for apptainer binary...
[2025-12-17 03:22:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:22:59] Running /usr/bin/apptainer --version
[2025-12-17 03:22:59] apptainer version 1.3.2-1.el7
[2025-12-17 03:22:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:23:00] c-206-23.aglt2.org
[2025-12-17 03:23:00] apptainer works
[2025-12-17 03:23:00] Set ATHENA_PROC_NUMBER=8
[2025-12-17 03:23:00] Set ATHENA_CORE_NUMBER=8
[2025-12-17 03:23:00] Starting ATLAS job with PandaID=6932079953
[2025-12-17 03:23:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 07:36:54]  *** The last 200 lines of the pilot log: ***
[2025-12-17 07:36:54] 2025-12-17 12:36:19,459 | INFO     | job 6932079953 has finished - writing final server update
[2025-12-17 07:36:54] 2025-12-17 12:36:19,459 | INFO     | total number of processed events: 400 (read)
[2025-12-17 07:36:54] 2025-12-17 12:36:19,460 | INFO     | executing command: lscpu
[2025-12-17 07:36:54] 2025-12-17 12:36:19,487 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 07:36:54] 2025-12-17 12:36:20,301 | INFO     | PID=24908 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 07:36:54] 2025-12-17 12:36:20,301 | INFO     | .. there are 3 such processes running
[2025-12-17 07:36:54] 2025-12-17 12:36:21,302 | INFO     | time since job start (15190s) is within the limit (174528.0s)
[2025-12-17 07:36:54] 2025-12-17 12:36:21,604 | INFO     | monitor loop #1096: job 0:6932079953 is in state 'finished'
[2025-12-17 07:36:54] 2025-12-17 12:36:21,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,705 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 07:36:54] 2025-12-17 12:36:22,709 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2350.375
[2025-12-17 07:36:54] 2025-12-17 12:36:22,711 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6932079953/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,712 | INFO     | extracted standard info from prmon json
[2025-12-17 07:36:54] 2025-12-17 12:36:22,712 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 07:36:54] 2025-12-17 12:36:22,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 07:36:54] 2025-12-17 12:36:22,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 07:36:54] 2025-12-17 12:36:22,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 07:36:54] 2025-12-17 12:36:22,716 | INFO     | fitting pss+swap vs Time
[2025-12-17 07:36:54] 2025-12-17 12:36:22,716 | INFO     | sum of square deviations: 4787066500.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,718 | INFO     | sum of deviations: -10953577118.000008
[2025-12-17 07:36:54] 2025-12-17 12:36:22,718 | INFO     | mean x: 1765967379.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,718 | INFO     | mean y: 2519699.6024096385
[2025-12-17 07:36:54] 2025-12-17 12:36:22,718 | INFO     | intersect: 4043336737.2911167
[2025-12-17 07:36:54] 2025-12-17 12:36:22,718 | INFO     | chi2: 1.6214642009471387
[2025-12-17 07:36:54] 2025-12-17 12:36:22,719 | INFO     | sum of square deviations: 4504437945.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,720 | INFO     | sum of deviations: -10553898987.49998
[2025-12-17 07:36:54] 2025-12-17 12:36:22,720 | INFO     | mean x: 1765967226.5
[2025-12-17 07:36:54] 2025-12-17 12:36:22,720 | INFO     | mean y: 2519916.118852459
[2025-12-17 07:36:54] 2025-12-17 12:36:22,720 | INFO     | intersect: 4140181473.74
[2025-12-17 07:36:54] 2025-12-17 12:36:22,721 | INFO     | chi2: 1.6210836653268155
[2025-12-17 07:36:54] 2025-12-17 12:36:22,721 | INFO     | current chi2=1.6210836653268155 (change=0.023468641497047655 %)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,721 | INFO     | right removable region: 243
[2025-12-17 07:36:54] 2025-12-17 12:36:22,721 | INFO     | sum of square deviations: 4504437945.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,723 | INFO     | sum of deviations: -47194456026.99998
[2025-12-17 07:36:54] 2025-12-17 12:36:22,723 | INFO     | mean x: 1765967531.5
[2025-12-17 07:36:54] 2025-12-17 12:36:22,723 | INFO     | mean y: 2539069.6475409837
[2025-12-17 07:36:54] 2025-12-17 12:36:22,723 | INFO     | intersect: 18505153164.486946
[2025-12-17 07:36:54] 2025-12-17 12:36:22,723 | INFO     | chi2: 0.24412656521329368
[2025-12-17 07:36:54] 2025-12-17 12:36:22,723 | INFO     | current chi2=0.24412656521329368 (change=84.94406690750907 %)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,724 | INFO     | sum of square deviations: 4233158440.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,725 | INFO     | sum of deviations: -51891621642.00001
[2025-12-17 07:36:54] 2025-12-17 12:36:22,725 | INFO     | mean x: 1765967684.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,725 | INFO     | mean y: 2541709.9874476986
[2025-12-17 07:36:54] 2025-12-17 12:36:22,725 | INFO     | intersect: 21650426661.37779
[2025-12-17 07:36:54] 2025-12-17 12:36:22,726 | INFO     | chi2: 0.21029480349660779
[2025-12-17 07:36:54] 2025-12-17 12:36:22,726 | INFO     | current chi2=0.21029480349660779 (change=13.858287682508882 %)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,726 | INFO     | left removable region: 20
[2025-12-17 07:36:54] 2025-12-17 12:36:22,726 | INFO     | sum of square deviations: 3438620752.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,727 | INFO     | sum of deviations: -42893845128.99999
[2025-12-17 07:36:54] 2025-12-17 12:36:22,727 | INFO     | mean x: 1765967806.0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,727 | INFO     | mean y: 2537689.802690583
[2025-12-17 07:36:54] 2025-12-17 12:36:22,728 | INFO     | intersect: 22031471682.975983
[2025-12-17 07:36:54] 2025-12-17 12:36:22,728 | INFO     | chi2: 0.18555585702019142
[2025-12-17 07:36:54] 2025-12-17 12:36:22,728 | INFO     | current memory leak: -12.47 B/s (using 223 data points, chi2=0.19)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,728 | INFO     | could have reported an average CPU frequency of 2550 MHz (12 samples)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | ..............................
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . Timing measurements:
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . get job = 0 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . initial setup = 2 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . payload setup = 4 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . stage-in = 0 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . payload execution = 15162 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . stage-out = 2 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | . log creation = 0 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,729 | INFO     | ..............................
[2025-12-17 07:36:54] 2025-12-17 12:36:22,803 | INFO     | 
[2025-12-17 07:36:54] 2025-12-17 12:36:22,803 | INFO     | job summary report
[2025-12-17 07:36:54] 2025-12-17 12:36:22,803 | INFO     | --------------------------------------------------
[2025-12-17 07:36:54] 2025-12-17 12:36:22,803 | INFO     | PanDA job id: 6932079953
[2025-12-17 07:36:54] 2025-12-17 12:36:22,803 | INFO     | task id: 47905890
[2025-12-17 07:36:54] 2025-12-17 12:36:22,803 | INFO     | errors: (none)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | pilot state: finished 
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | transexitcode: 0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | exeerrorcode: 0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | exeerrordiag: 
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | exitcode: 0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | exitmsg: OK
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | cpuconsumptiontime: 114547 s
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | nevents: 400
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | neventsw: 0
[2025-12-17 07:36:54] 2025-12-17 12:36:22,804 | INFO     | pid: 31520
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | pgrp: 31520
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | corecount: 8
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | event service: False
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | sizes: {0: 2283756, 1: 2283898, 4: 2284160, 11: 2284188, 15170: 2315245, 15172: 2324243, 15173: 2324427, 15176: 2324621}
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | --------------------------------------------------
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | 
[2025-12-17 07:36:54] 2025-12-17 12:36:22,805 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-17 07:36:54] 2025-12-17 12:36:22,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,819 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,819 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | job 6932079953 has completed (purged errors)
[2025-12-17 07:36:54] 2025-12-17 12:36:22,821 | INFO     | overall cleanup function is called
[2025-12-17 07:36:54] 2025-12-17 12:36:23,828 | INFO     | --- collectZombieJob: --- 10, [31520]
[2025-12-17 07:36:54] 2025-12-17 12:36:23,828 | INFO     | zombie collector waiting for pid 31520
[2025-12-17 07:36:54] 2025-12-17 12:36:23,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 07:36:54] 2025-12-17 12:36:23,828 | INFO     | collected zombie processes
[2025-12-17 07:36:54] 2025-12-17 12:36:23,829 | INFO     | will attempt to kill all subprocesses of pid=31520
[2025-12-17 07:36:54] 2025-12-17 12:36:23,983 | INFO     | process IDs to be killed: [31520] (in reverse order)
[2025-12-17 07:36:54] 2025-12-17 12:36:24,021 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 07:36:54] 2025-12-17 12:36:24,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 07:36:54] 2025-12-17 12:36:24,024 | INFO     | did not find any defunct processes belonging to 31520
[2025-12-17 07:36:54] 2025-12-17 12:36:24,026 | INFO     | did not find any defunct processes belonging to 31520
[2025-12-17 07:36:54] 2025-12-17 12:36:24,026 | INFO     | ready for new job
[2025-12-17 07:36:54] 2025-12-17 12:36:24,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 07:36:54] 2025-12-17 12:36:24,028 | INFO     | ***************************************
[2025-12-17 07:36:54] 2025-12-17 12:36:24,028 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 07:36:54] 2025-12-17 12:36:24,028 | INFO     | ***************************************
[2025-12-17 07:36:54] 2025-12-17 12:36:24,028 | INFO     | 
[2025-12-17 07:36:54] 2025-12-17 12:36:24,029 | INFO     | architecture information:
[2025-12-17 07:36:54] 2025-12-17 12:36:24,029 | INFO     | executing command: cat /etc/os-release
[2025-12-17 07:36:54] 2025-12-17 12:36:24,039 | INFO     | cat /etc/os-release:
[2025-12-17 07:36:54] NAME="CentOS Linux"
[2025-12-17 07:36:54] VERSION="7 (Core)"
[2025-12-17 07:36:54] ID="centos"
[2025-12-17 07:36:54] ID_LIKE="rhel fedora"
[2025-12-17 07:36:54] VERSION_ID="7"
[2025-12-17 07:36:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 07:36:54] ANSI_COLOR="0;31"
[2025-12-17 07:36:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 07:36:54] HOME_URL="https://www.centos.org/"
[2025-12-17 07:36:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 07:36:54] 
[2025-12-17 07:36:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 07:36:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 07:36:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 07:36:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 07:36:54] 
[2025-12-17 07:36:54] 2025-12-17 12:36:24,039 | INFO     | ***************************************
[2025-12-17 07:36:54] 2025-12-17 12:36:24,542 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-17 07:36:54] 2025-12-17 12:36:24,557 | INFO     | sufficient remaining disk space (27984396288 B)
[2025-12-17 07:36:54] 2025-12-17 12:36:24,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 07:36:54] 2025-12-17 12:36:24,558 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 07:36:54] 2025-12-17 12:36:24,558 | INFO     | update_server=False
[2025-12-17 07:36:54] 2025-12-17 12:36:24,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 07:36:54] 2025-12-17 12:36:24,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:36:54] 2025-12-17 12:36:24,836 | INFO     | all payload control threads have been joined
[2025-12-17 07:36:54] 2025-12-17 12:36:24,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 07:36:54] 2025-12-17 12:36:25,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:36:54] 2025-12-17 12:36:25,115 | INFO     | aborting loop
[2025-12-17 07:36:54] 2025-12-17 12:36:25,335 | INFO     | all data control threads have been joined
[2025-12-17 07:36:54] 2025-12-17 12:36:25,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 07:36:54] 2025-12-17 12:36:25,564 | INFO     | [job] retrieve thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,564 | INFO     | [job] queue monitor thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,786 | INFO     | [job] validate thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,790 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,800 | INFO     | [data] copytool_in thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,801 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,824 | INFO     | [payload] validate_post thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:25,842 | INFO     | [payload] control thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:26,121 | INFO     | [job] job monitor thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:26,124 | INFO     | all job control threads have been joined
[2025-12-17 07:36:54] 2025-12-17 12:36:26,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:26,341 | INFO     | [data] control thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:26,473 | INFO     | [payload] failed_post thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:26,791 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:26,857 | INFO     | [data] copytool_out thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:27,130 | INFO     | [job] control thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:29,468 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 07:36:54] 2025-12-17 12:36:35,599 | INFO     | [monitor] cgroup control has ended
[2025-12-17 07:36:54] 2025-12-17 12:36:37,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762184939328)>', '<ExcThread(monitor, started 139761884833536)>']
[2025-12-17 07:36:54] 2025-12-17 12:36:42,038 | INFO     | all workflow threads have been joined
[2025-12-17 07:36:54] 2025-12-17 12:36:42,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 07:36:54] 2025-12-17 12:36:42,039 | INFO     | traces error code: 0
[2025-12-17 07:36:54] 2025-12-17 12:36:42,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 07:36:54] 2025-12-17 12:36:54,595 | INFO     | PID=24908 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 07:36:54] 2025-12-17 12:36:54,595 | INFO     | .. there are 3 such processes running
[2025-12-17 07:36:54] 2025-12-17 12:36:54,596 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 07:36:54] 2025-12-17 12:36:54,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 07:36:54] 2025-12-17 12:36:54,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 07:36:54] 2025-12-17 12:36:54,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 07:36:54] 2025-12-17 12:36:54,597 | INFO     | [monitor] control thread has ended
[2025-12-17 07:36:54] 2025-12-17 12:36:54,686 [wrapper] ==== pilot stdout END ====
[2025-12-17 07:36:54] 2025-12-17 12:36:54,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 07:36:54] 2025-12-17 12:36:54,691 [wrapper] pilotpid: 24908
[2025-12-17 07:36:54] 2025-12-17 12:36:54,694 [wrapper] Pilot exit status: 0
[2025-12-17 07:36:54] 2025-12-17 12:36:54,703 [wrapper] pandaids: 6932079953
[2025-12-17 07:36:54] 2025-12-17 12:36:54,738 [wrapper] cleanup supervisor_pilot 21483 24909
[2025-12-17 07:36:54] 2025-12-17 12:36:54,740 [wrapper] Test setup, not cleaning
[2025-12-17 07:36:54] 2025-12-17 12:36:54,743 [wrapper] apfmon messages muted
[2025-12-17 07:36:54] 2025-12-17 12:36:54,745 [wrapper] ==== wrapper stdout END ====
[2025-12-17 07:36:54] 2025-12-17 12:36:54,747 [wrapper] ==== wrapper stderr END ====
[2025-12-17 07:36:54]  *** Error codes and diagnostics ***
[2025-12-17 07:36:54]     "exeErrorCode": 0,
[2025-12-17 07:36:54]     "exeErrorDiag": "",
[2025-12-17 07:36:54]     "pilotErrorCode": 0,
[2025-12-17 07:36:54]     "pilotErrorDiag": "",
[2025-12-17 07:36:54]  *** Listing of results directory ***
[2025-12-17 07:36:54] total 397552
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 22:48 pilot3.tar.gz
[2025-12-17 07:36:54] -rwx------ 1 boincer umatlas     36322 Dec 16 22:49 runpilot2-wrapper.sh
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 22:50 queuedata.json
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas       100 Dec 17 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 07:36:54] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 03:22 run_atlas
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas       105 Dec 17 03:22 job.xml
[2025-12-17 07:36:54] -rw-r--r-- 2 boincer umatlas 195813170 Dec 17 03:22 EVNT.47905888._000014.pool.root.1
[2025-12-17 07:36:54] drwxrwx--x 2 boincer umatlas      4096 Dec 17 03:22 shared
[2025-12-17 07:36:54] -rw-r--r-- 2 boincer umatlas    592378 Dec 17 03:22 input.tar.gz
[2025-12-17 07:36:54] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 03:22 start_atlas.sh
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas         0 Dec 17 03:22 boinc_lockfile
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas      2445 Dec 17 03:23 pandaJob.out
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas        57 Dec 17 03:23 setup.sh.local
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas    987417 Dec 17 03:23 agis_schedconf.cvmfs.json
[2025-12-17 07:36:54] drwx------ 5 boincer umatlas      4096 Dec 17 03:23 pilot3
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas      5952 Dec 17 07:28 init_data.xml
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas 202146279 Dec 17 07:35 HITS.47905890._000400.pool.root.1
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas       531 Dec 17 07:35 boinc_task_state.xml
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas      1056 Dec 17 07:36 memory_monitor_summary.json
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas   1516240 Dec 17 07:36 agis_ddmendpoints.agis.ALL.json
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas    493534 Dec 17 07:36 log.47905890._000400.job.log.tgz.1
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas      7857 Dec 17 07:36 heartbeat.json
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 07:36 boinc_mmap_file
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas        29 Dec 17 07:36 wrapper_checkpoint.txt
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas        95 Dec 17 07:36 pilot_heartbeat.json
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas       820 Dec 17 07:36 pilotlog.txt
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas   2114913 Dec 17 07:36 log.47905890._000400.job.log.1
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas       357 Dec 17 07:36 output.list
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas       620 Dec 17 07:36 runtime_log
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas   2631680 Dec 17 07:36 result.tar.gz
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas      9343 Dec 17 07:36 runtime_log.err
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas       663 Dec 17 07:36 IpIMDm3ixp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGnWKDmVFbAJm.diag
[2025-12-17 07:36:54] -rw-r--r-- 1 boincer umatlas     21415 Dec 17 07:36 stderr.txt
[2025-12-17 07:36:54] HITS file was successfully produced:
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas 202146279 Dec 17 07:35 shared/HITS.pool.root.1
[2025-12-17 07:36:54]  *** Contents of shared directory: ***
[2025-12-17 07:36:54] total 391808
[2025-12-17 07:36:54] -rw-r--r-- 2 boincer umatlas 195813170 Dec 17 03:22 ATLAS.root_0
[2025-12-17 07:36:54] -rw-r--r-- 2 boincer umatlas    592378 Dec 17 03:22 input.tar.gz
[2025-12-17 07:36:54] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 03:22 start_atlas.sh
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas 202146279 Dec 17 07:35 HITS.pool.root.1
[2025-12-17 07:36:54] -rw------- 1 boincer umatlas   2631680 Dec 17 07:36 result.tar.gz
07:36:56 (21179): run_atlas exited; CPU time 114763.986077
07:36:56 (21179): called boinc_finish(0)

</stderr_txt>
]]>

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