Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:14:07 (572868): wrapper (7.7.26015): starting
03:14:07 (572868): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 03:14:07] Arguments: --nthreads 8
[2025-12-17 03:14:07] Threads: 8
[2025-12-17 03:14:07] Checking for CVMFS
[2025-12-17 03:14:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:14:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:14:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:14:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:14:09] 2.13.3.0 11235 58340 252996 154104 0 949 21837415 32935936 34654 16776704 0 543603822 99.562 591669777 18185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 03:14:09] CVMFS is ok
[2025-12-17 03:14:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 03:14:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 03:14:09] Further information can be found at the LHC@home message board.
[2025-12-17 03:14:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:14:09] Checking for apptainer binary...
[2025-12-17 03:14:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:14:09] Running /usr/bin/apptainer --version
[2025-12-17 03:14:09] apptainer version 1.4.5-2.el9
[2025-12-17 03:14:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:14:09] c7-2-37.aglt2.org
[2025-12-17 03:14:09] apptainer works
[2025-12-17 03:14:09] Set ATHENA_PROC_NUMBER=8
[2025-12-17 03:14:09] Set ATHENA_CORE_NUMBER=8
[2025-12-17 03:14:09] Starting ATLAS job with PandaID=6931732685
[2025-12-17 03:14:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:10:48]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:10:48] 2025-12-17 10:10:01,078 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 05:10:48] 2025-12-17 10:10:01,111 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3270.229239583332
[2025-12-17 05:10:48] 2025-12-17 10:10:01,143 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931732685/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,143 | INFO     | extracted standard info from prmon json
[2025-12-17 05:10:48] 2025-12-17 10:10:01,143 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 05:10:48] 2025-12-17 10:10:01,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 05:10:48] 2025-12-17 10:10:01,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 05:10:48] 2025-12-17 10:10:01,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 05:10:48] 2025-12-17 10:10:01,150 | INFO     | fitting pss+swap vs Time
[2025-12-17 05:10:48] 2025-12-17 10:10:01,150 | INFO     | sum of square deviations: 447377904.9911509
[2025-12-17 05:10:48] 2025-12-17 10:10:01,150 | INFO     | sum of deviations: -1265257880.716814
[2025-12-17 05:10:48] 2025-12-17 10:10:01,151 | INFO     | mean x: 1765962752.0088496
[2025-12-17 05:10:48] 2025-12-17 10:10:01,151 | INFO     | mean y: 2495819.7168141594
[2025-12-17 05:10:48] 2025-12-17 10:10:01,151 | INFO     | intersect: 4996927292.759153
[2025-12-17 05:10:48] 2025-12-17 10:10:01,151 | INFO     | chi2: 2.724161838992629
[2025-12-17 05:10:48] 2025-12-17 10:10:01,151 | INFO     | sum of square deviations: 390577144.99074095
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | sum of deviations: 6366391532.36111
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | mean x: 1765962599.5092592
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | mean y: 2515628.138888889
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | intersect: -28782602713.203598
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | chi2: 2.0323598816654442
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | current chi2=2.0323598816654442 (change=25.39503884919727 %)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,152 | INFO     | sum of square deviations: 338799734.99029166
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | sum of deviations: 6820182582.961168
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | mean x: 1765962447.0097086
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | mean y: 2516967.0388349514
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | intersect: -35547057248.5497
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | chi2: 2.037522933324505
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | current chi2=2.037522933324505 (change=-0.25404219526463406 %)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,153 | INFO     | right removable region: 102
[2025-12-17 05:10:48] 2025-12-17 10:10:01,154 | INFO     | sum of square deviations: 390576534.99074095
[2025-12-17 05:10:48] 2025-12-17 10:10:01,154 | INFO     | sum of deviations: -22637593533.333332
[2025-12-17 05:10:48] 2025-12-17 10:10:01,154 | INFO     | mean x: 1765962904.5092592
[2025-12-17 05:10:48] 2025-12-17 10:10:01,154 | INFO     | mean y: 2552259.3333333335
[2025-12-17 05:10:48] 2025-12-17 10:10:01,154 | INFO     | intersect: 102356756482.516
[2025-12-17 05:10:48] 2025-12-17 10:10:01,154 | INFO     | chi2: 0.7616052409601765
[2025-12-17 05:10:48] 2025-12-17 10:10:01,155 | INFO     | current chi2=0.7616052409601765 (change=72.04258461964905 %)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,155 | INFO     | sum of square deviations: 338798514.99029166
[2025-12-17 05:10:48] 2025-12-17 10:10:01,155 | INFO     | sum of deviations: -20516350267.15535
[2025-12-17 05:10:48] 2025-12-17 10:10:01,155 | INFO     | mean x: 1765963057.0097086
[2025-12-17 05:10:48] 2025-12-17 10:10:01,155 | INFO     | mean y: 2545990.155339806
[2025-12-17 05:10:48] 2025-12-17 10:10:01,155 | INFO     | intersect: 106942556153.73538
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | chi2: 0.7571894811071078
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | current chi2=0.7571894811071078 (change=0.5797964109991636 %)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | left removable region: 20
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | sum of square deviations: 170944600.5
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | sum of deviations: -8648034263.5
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | mean x: 1765963026.5
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | mean y: 2564322.3780487804
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | intersect: 89342085527.35556
[2025-12-17 05:10:48] 2025-12-17 10:10:01,159 | INFO     | chi2: 0.014520868095145781
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | current memory leak: -50.59 B/s (using 82 data points, chi2=0.01)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | could have reported an average CPU frequency of 3214 MHz (7 samples)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | ..............................
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . Timing measurements:
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . get job = 2 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . initial setup = 4 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . payload setup = 18 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . stage-in = 0 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . payload execution = 6852 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,160 | INFO     | . stage-out = 0 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,161 | INFO     | . log creation = 0 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,161 | INFO     | ..............................
[2025-12-17 05:10:48] 2025-12-17 10:10:01,254 | INFO     | 
[2025-12-17 05:10:48] 2025-12-17 10:10:01,254 | INFO     | job summary report
[2025-12-17 05:10:48] 2025-12-17 10:10:01,254 | INFO     | --------------------------------------------------
[2025-12-17 05:10:48] 2025-12-17 10:10:01,254 | INFO     | PanDA job id: 6931732685
[2025-12-17 05:10:48] 2025-12-17 10:10:01,254 | INFO     | task id: 47886831
[2025-12-17 05:10:48] 2025-12-17 10:10:01,254 | INFO     | errors: (none)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | pilot state: finished 
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | transexitcode: 0
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | exeerrorcode: 0
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | exeerrordiag: 
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | exitcode: 0
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | exitmsg: OK
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | cpuconsumptiontime: 32711 s
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | nevents: 400
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | neventsw: 0
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | pid: 599767
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | pgrp: 599767
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | corecount: 8
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | event service: False
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | sizes: {0: 2283822, 1: 2284021, 11: 2284021, 12: 2284311, 22: 2284339, 6874: 2311769, 6876: 2320767, 6879: 2320823, 6890: 2321017}
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | --------------------------------------------------
[2025-12-17 05:10:48] 2025-12-17 10:10:01,255 | INFO     | 
[2025-12-17 05:10:48] 2025-12-17 10:10:01,256 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 05:10:48] 2025-12-17 10:10:01,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 05:10:48] 2025-12-17 10:10:01,331 | INFO     | job 6931732685 has completed (purged errors)
[2025-12-17 05:10:48] 2025-12-17 10:10:01,331 | INFO     | overall cleanup function is called
[2025-12-17 05:10:48] 2025-12-17 10:10:02,007 | INFO     | PID=578032 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:10:48] 2025-12-17 10:10:02,008 | INFO     | .. there are 47 such processes running
[2025-12-17 05:10:48] 2025-12-17 10:10:02,340 | INFO     | --- collectZombieJob: --- 10, [599767]
[2025-12-17 05:10:48] 2025-12-17 10:10:02,340 | INFO     | zombie collector waiting for pid 599767
[2025-12-17 05:10:48] 2025-12-17 10:10:02,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 05:10:48] 2025-12-17 10:10:02,340 | INFO     | collected zombie processes
[2025-12-17 05:10:48] 2025-12-17 10:10:02,340 | INFO     | will attempt to kill all subprocesses of pid=599767
[2025-12-17 05:10:48] 2025-12-17 10:10:02,920 | INFO     | process IDs to be killed: [599767] (in reverse order)
[2025-12-17 05:10:48] 2025-12-17 10:10:03,088 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 05:10:48] 2025-12-17 10:10:03,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 05:10:48] 2025-12-17 10:10:03,112 | INFO     | did not find any defunct processes belonging to 599767
[2025-12-17 05:10:48] 2025-12-17 10:10:03,135 | INFO     | did not find any defunct processes belonging to 599767
[2025-12-17 05:10:48] 2025-12-17 10:10:03,135 | INFO     | ready for new job
[2025-12-17 05:10:48] 2025-12-17 10:10:03,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 05:10:48] 2025-12-17 10:10:03,137 | INFO     | ***************************************
[2025-12-17 05:10:48] 2025-12-17 10:10:03,137 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 05:10:48] 2025-12-17 10:10:03,137 | INFO     | ***************************************
[2025-12-17 05:10:48] 2025-12-17 10:10:03,137 | INFO     | 
[2025-12-17 05:10:48] 2025-12-17 10:10:03,141 | INFO     | architecture information:
[2025-12-17 05:10:48] 2025-12-17 10:10:03,141 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:10:48] 2025-12-17 10:10:03,354 | INFO     | cat /etc/os-release:
[2025-12-17 05:10:48] NAME="CentOS Linux"
[2025-12-17 05:10:48] VERSION="7 (Core)"
[2025-12-17 05:10:48] ID="centos"
[2025-12-17 05:10:48] ID_LIKE="rhel fedora"
[2025-12-17 05:10:48] VERSION_ID="7"
[2025-12-17 05:10:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:10:48] ANSI_COLOR="0;31"
[2025-12-17 05:10:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:10:48] HOME_URL="https://www.centos.org/"
[2025-12-17 05:10:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:10:48] 
[2025-12-17 05:10:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:10:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:10:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:10:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:10:48] 
[2025-12-17 05:10:48] 2025-12-17 10:10:03,354 | INFO     | ***************************************
[2025-12-17 05:10:48] 2025-12-17 10:10:03,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 05:10:48] 2025-12-17 10:10:04,039 | INFO     | sufficient remaining disk space (73962356736 B)
[2025-12-17 05:10:48] 2025-12-17 10:10:04,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:10:48] 2025-12-17 10:10:04,040 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:10:48] 2025-12-17 10:10:04,040 | INFO     | update_server=False
[2025-12-17 05:10:48] 2025-12-17 10:10:04,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:10:48] 2025-12-17 10:10:04,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:10:48] 2025-12-17 10:10:04,113 | INFO     | aborting loop
[2025-12-17 05:10:48] 2025-12-17 10:10:04,435 | INFO     | all job control threads have been joined
[2025-12-17 05:10:48] 2025-12-17 10:10:04,529 | INFO     | all data control threads have been joined
[2025-12-17 05:10:48] 2025-12-17 10:10:04,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:10:48] 2025-12-17 10:10:04,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:10:48] 2025-12-17 10:10:04,944 | INFO     | all payload control threads have been joined
[2025-12-17 05:10:48] 2025-12-17 10:10:05,045 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,119 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,177 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,179 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,326 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,440 | INFO     | [job] control thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,536 | INFO     | [data] control thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,726 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,932 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:05,949 | INFO     | [payload] control thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:06,205 | INFO     | [job] validate thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:06,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:10:48] 2025-12-17 10:10:06,435 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:06,727 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:07,271 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:08,702 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:10:48] 2025-12-17 10:10:34,854 | INFO     | PID=578032 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 05:10:48] 2025-12-17 10:10:34,854 | INFO     | .. there are 47 such processes running
[2025-12-17 05:10:48] 2025-12-17 10:10:34,855 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:10:48] 2025-12-17 10:10:34,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:10:48] 2025-12-17 10:10:34,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:10:48] 2025-12-17 10:10:41,478 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:10:48] 2025-12-17 10:10:42,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908330813248)>', '<ExcThread(monitor, started 139907603355392)>']
[2025-12-17 05:10:48] 2025-12-17 10:10:43,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:10:48] 2025-12-17 10:10:43,911 | INFO     | [monitor] control thread has ended
[2025-12-17 05:10:48] 2025-12-17 10:10:48,022 | INFO     | all workflow threads have been joined
[2025-12-17 05:10:48] 2025-12-17 10:10:48,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:10:48] 2025-12-17 10:10:48,022 | INFO     | traces error code: 0
[2025-12-17 05:10:48] 2025-12-17 10:10:48,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:10:48] 2025-12-17 10:10:48,139 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:10:48] 2025-12-17 10:10:48,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:10:48] 2025-12-17 10:10:48,159 [wrapper] pilotpid: 578032
[2025-12-17 05:10:48] 2025-12-17 10:10:48,212 [wrapper] Pilot exit status: 0
[2025-12-17 05:10:48] 2025-12-17 10:10:48,404 [wrapper] pandaids: 6931732685
[2025-12-17 05:10:48] 2025-12-17 10:10:48,604 [wrapper] cleanup supervisor_pilot 1662024 578033
[2025-12-17 05:10:48] 2025-12-17 10:10:48,608 [wrapper] Test setup, not cleaning
[2025-12-17 05:10:48] 2025-12-17 10:10:48,612 [wrapper] apfmon messages muted
[2025-12-17 05:10:48] 2025-12-17 10:10:48,615 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:10:48] 2025-12-17 10:10:48,618 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:10:48]  *** Error codes and diagnostics ***
[2025-12-17 05:10:48]     "exeErrorCode": 0,
[2025-12-17 05:10:48]     "exeErrorDiag": "",
[2025-12-17 05:10:48]     "pilotErrorCode": 0,
[2025-12-17 05:10:48]     "pilotErrorDiag": "",
[2025-12-17 05:10:48]  *** Listing of results directory ***
[2025-12-17 05:10:48] total 339760
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 17:36 queuedata.json
[2025-12-17 05:10:48] -rwx------. 1 boincer umatlas     36322 Dec 16 17:36 runpilot2-wrapper.sh
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas       100 Dec 17 03:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:10:48] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 03:14 run_atlas
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas       105 Dec 17 03:14 job.xml
[2025-12-17 05:10:48] -rw-r--r--. 2 boincer umatlas 191177052 Dec 17 03:14 EVNT.47886829._000616.pool.root.1
[2025-12-17 05:10:48] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 03:14 start_atlas.sh
[2025-12-17 05:10:48] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 03:14 shared
[2025-12-17 05:10:48] -rw-r--r--. 2 boincer umatlas    592412 Dec 17 03:14 input.tar.gz
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas         0 Dec 17 03:14 boinc_lockfile
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 03:14 pandaJob.out
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas        57 Dec 17 03:14 setup.sh.local
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas    987409 Dec 17 03:14 agis_schedconf.cvmfs.json
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas   1516240 Dec 17 03:14 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:10:48] drwx------. 5 boincer umatlas      4096 Dec 17 03:14 pilot3
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas 150157365 Dec 17 05:08 HITS.47886831._015905.pool.root.1
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas       529 Dec 17 05:08 boinc_task_state.xml
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas      1049 Dec 17 05:09 memory_monitor_summary.json
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas    352268 Dec 17 05:09 log.47886831._015905.job.log.tgz.1
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas      7797 Dec 17 05:10 heartbeat.json
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas        95 Dec 17 05:10 pilot_heartbeat.json
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas      6944 Dec 17 05:10 init_data.xml
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas      4823 Dec 17 05:10 pilotlog.txt
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas        27 Dec 17 05:10 wrapper_checkpoint.txt
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 05:10 boinc_mmap_file
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas    976168 Dec 17 05:10 log.47886831._015905.job.log.1
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas       357 Dec 17 05:10 output.list
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas       620 Dec 17 05:10 runtime_log
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas   1351680 Dec 17 05:10 result.tar.gz
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas       655 Dec 17 05:10 yKIKDm9psp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmioaKDmLyLpMo.diag
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas      9337 Dec 17 05:10 runtime_log.err
[2025-12-17 05:10:48] -rw-r--r--. 1 boincer umatlas     21246 Dec 17 05:10 stderr.txt
[2025-12-17 05:10:48] HITS file was successfully produced:
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas 150157365 Dec 17 05:08 shared/HITS.pool.root.1
[2025-12-17 05:10:48]  *** Contents of shared directory: ***
[2025-12-17 05:10:48] total 335260
[2025-12-17 05:10:48] -rw-r--r--. 2 boincer umatlas 191177052 Dec 17 03:14 ATLAS.root_0
[2025-12-17 05:10:48] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 03:14 start_atlas.sh
[2025-12-17 05:10:48] -rw-r--r--. 2 boincer umatlas    592412 Dec 17 03:14 input.tar.gz
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas 150157365 Dec 17 05:08 HITS.pool.root.1
[2025-12-17 05:10:48] -rw-------. 1 boincer umatlas   1351680 Dec 17 05:10 result.tar.gz
05:10:50 (572868): run_atlas exited; CPU time 33047.718408
05:10:50 (572868): called boinc_finish(0)

</stderr_txt>
]]>

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