Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:31:45 (156315): wrapper (7.7.26015): starting
02:31:45 (156315): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 02:31:45] Arguments: --nthreads 8
[2025-12-17 02:31:45] Threads: 8
[2025-12-17 02:31:45] Checking for CVMFS
[2025-12-17 02:31:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 02:31:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 02:31:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 02:31:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 02:31:46] 2.13.3.0 11314 59994 234508 154104 0 439 24913720 32935936 33592 16776704 0 531366361 99.594 575734252 34296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 02:31:46] CVMFS is ok
[2025-12-17 02:31:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 02:31:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 02:31:46] Further information can be found at the LHC@home message board.
[2025-12-17 02:31:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 02:31:46] Checking for apptainer binary...
[2025-12-17 02:31:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 02:31:46] Running /usr/bin/apptainer --version
[2025-12-17 02:31:46] apptainer version 1.4.5-2.el9
[2025-12-17 02:31:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 02:31:46] c7-2-10.aglt2.org
[2025-12-17 02:31:46] apptainer works
[2025-12-17 02:31:46] Set ATHENA_PROC_NUMBER=8
[2025-12-17 02:31:46] Set ATHENA_CORE_NUMBER=8
[2025-12-17 02:31:46] Starting ATLAS job with PandaID=6931731794
[2025-12-17 02:31:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:12:50]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:12:50] 2025-12-17 11:12:09,365 | INFO     | monitor loop #734: job 0:6931731794 is in state 'finished'
[2025-12-17 06:12:50] 2025-12-17 11:12:09,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:12:50] 2025-12-17 11:12:10,358 | INFO     | time since job start (13206s) is within the limit (174528.0s)
[2025-12-17 06:12:50] 2025-12-17 11:12:11,871 | INFO     | monitor loop #735: job 0:6931731794 is in state 'finished'
[2025-12-17 06:12:50] 2025-12-17 11:12:11,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:12:50] 2025-12-17 11:12:12,364 | INFO     | time since job start (13208s) is within the limit (174528.0s)
[2025-12-17 06:12:50] 2025-12-17 11:12:14,370 | INFO     | time since job start (13210s) is within the limit (174528.0s)
[2025-12-17 06:12:50] 2025-12-17 11:12:14,375 | INFO     | monitor loop #736: job 0:6931731794 is in state 'finished'
[2025-12-17 06:12:50] 2025-12-17 11:12:14,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,578 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 06:12:50] 2025-12-17 11:12:15,591 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3169.067104166667
[2025-12-17 06:12:50] 2025-12-17 11:12:15,605 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6931731794/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,606 | INFO     | extracted standard info from prmon json
[2025-12-17 06:12:50] 2025-12-17 11:12:15,606 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:12:50] 2025-12-17 11:12:15,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:12:50] 2025-12-17 11:12:15,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:12:50] 2025-12-17 11:12:15,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:12:50] 2025-12-17 11:12:15,609 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:12:50] 2025-12-17 11:12:15,610 | INFO     | sum of square deviations: 3125231380.425911
[2025-12-17 06:12:50] 2025-12-17 11:12:15,611 | INFO     | sum of deviations: 55955421436.407425
[2025-12-17 06:12:50] 2025-12-17 11:12:15,611 | INFO     | mean x: 1765963317.7685184
[2025-12-17 06:12:50] 2025-12-17 11:12:15,611 | INFO     | mean y: 2419255.1481481483
[2025-12-17 06:12:50] 2025-12-17 11:12:15,615 | INFO     | intersect: -31616110593.834446
[2025-12-17 06:12:50] 2025-12-17 11:12:15,615 | INFO     | chi2: 3.2844420527758813
[2025-12-17 06:12:50] 2025-12-17 11:12:15,616 | INFO     | sum of square deviations: 2913200259.1374426
[2025-12-17 06:12:50] 2025-12-17 11:12:15,617 | INFO     | sum of deviations: 67662374116.734604
[2025-12-17 06:12:50] 2025-12-17 11:12:15,617 | INFO     | mean x: 1765963165.2654028
[2025-12-17 06:12:50] 2025-12-17 11:12:15,617 | INFO     | mean y: 2427495.0047393367
[2025-12-17 06:12:50] 2025-12-17 11:12:15,617 | INFO     | intersect: -41014066304.13407
[2025-12-17 06:12:50] 2025-12-17 11:12:15,617 | INFO     | chi2: 2.5988856568338616
[2025-12-17 06:12:50] 2025-12-17 11:12:15,617 | INFO     | current chi2=2.5988856568338616 (change=20.872841868609445 %)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,618 | INFO     | right removable region: 210
[2025-12-17 06:12:50] 2025-12-17 11:12:15,618 | INFO     | sum of square deviations: 2913191110.05687
[2025-12-17 06:12:50] 2025-12-17 11:12:15,619 | INFO     | sum of deviations: 7579340631.004742
[2025-12-17 06:12:50] 2025-12-17 11:12:15,619 | INFO     | mean x: 1765963470.2748816
[2025-12-17 06:12:50] 2025-12-17 11:12:15,619 | INFO     | mean y: 2453863.18957346
[2025-12-17 06:12:50] 2025-12-17 11:12:15,619 | INFO     | intersect: -4592108655.183364
[2025-12-17 06:12:50] 2025-12-17 11:12:15,619 | INFO     | chi2: 1.0538476135583443
[2025-12-17 06:12:50] 2025-12-17 11:12:15,619 | INFO     | current chi2=1.0538476135583443 (change=67.91395321870046 %)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,620 | INFO     | sum of square deviations: 2710964977.1698895
[2025-12-17 06:12:50] 2025-12-17 11:12:15,625 | INFO     | sum of deviations: -3973610841.4902916
[2025-12-17 06:12:50] 2025-12-17 11:12:15,625 | INFO     | mean x: 1765963622.7815535
[2025-12-17 06:12:50] 2025-12-17 11:12:15,625 | INFO     | mean y: 2462577.344660194
[2025-12-17 06:12:50] 2025-12-17 11:12:15,625 | INFO     | intersect: 2590932829.176504
[2025-12-17 06:12:50] 2025-12-17 11:12:15,625 | INFO     | chi2: 0.9490728276355351
[2025-12-17 06:12:50] 2025-12-17 11:12:15,626 | INFO     | current chi2=0.9490728276355351 (change=9.942119199666294 %)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,626 | INFO     | left removable region: 20
[2025-12-17 06:12:50] 2025-12-17 11:12:15,626 | INFO     | sum of square deviations: 2127102376.1526299
[2025-12-17 06:12:50] 2025-12-17 11:12:15,627 | INFO     | sum of deviations: -6502945890.715787
[2025-12-17 06:12:50] 2025-12-17 11:12:15,627 | INFO     | mean x: 1765963744.7842104
[2025-12-17 06:12:50] 2025-12-17 11:12:15,627 | INFO     | mean y: 2485025.494736842
[2025-12-17 06:12:50] 2025-12-17 11:12:15,627 | INFO     | intersect: 5401363239.372259
[2025-12-17 06:12:50] 2025-12-17 11:12:15,627 | INFO     | chi2: 0.125168644577798
[2025-12-17 06:12:50] 2025-12-17 11:12:15,627 | INFO     | current memory leak: -3.06 B/s (using 190 data points, chi2=0.13)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,628 | INFO     | could have reported an average CPU frequency of 3168 MHz (11 samples)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,628 | INFO     | ..............................
[2025-12-17 06:12:50] 2025-12-17 11:12:15,632 | INFO     | . Timing measurements:
[2025-12-17 06:12:50] 2025-12-17 11:12:15,632 | INFO     | . get job = 0 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,632 | INFO     | . initial setup = 3 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,632 | INFO     | . payload setup = 9 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,632 | INFO     | . stage-in = 0 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,633 | INFO     | . payload execution = 13165 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,633 | INFO     | . stage-out = 4 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,633 | INFO     | . log creation = 0 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,633 | INFO     | ..............................
[2025-12-17 06:12:50] 2025-12-17 11:12:15,922 | INFO     | 
[2025-12-17 06:12:50] 2025-12-17 11:12:15,922 | INFO     | job summary report
[2025-12-17 06:12:50] 2025-12-17 11:12:15,922 | INFO     | --------------------------------------------------
[2025-12-17 06:12:50] 2025-12-17 11:12:15,922 | INFO     | PanDA job id: 6931731794
[2025-12-17 06:12:50] 2025-12-17 11:12:15,922 | INFO     | task id: 47886831
[2025-12-17 06:12:50] 2025-12-17 11:12:15,922 | INFO     | errors: (none)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | pilot state: finished 
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | transexitcode: 0
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | exeerrorcode: 0
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | exeerrordiag: 
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | exitcode: 0
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | exitmsg: OK
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | cpuconsumptiontime: 35863 s
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | nevents: 400
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | neventsw: 0
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | pid: 176142
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | pgrp: 176142
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | corecount: 8
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | event service: False
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | sizes: {0: 2283988, 7: 2284250, 11: 2284278, 13177: 2314338, 13178: 2314337, 13184: 2323391, 13185: 2323575, 13193: 2323769}
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | --------------------------------------------------
[2025-12-17 06:12:50] 2025-12-17 11:12:15,923 | INFO     | 
[2025-12-17 06:12:50] 2025-12-17 11:12:15,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 06:12:50] 2025-12-17 11:12:15,979 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,981 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:12:50] 2025-12-17 11:12:15,981 | INFO     | job 6931731794 has completed (purged errors)
[2025-12-17 06:12:50] 2025-12-17 11:12:15,981 | INFO     | overall cleanup function is called
[2025-12-17 06:12:50] 2025-12-17 11:12:16,989 | INFO     | --- collectZombieJob: --- 10, [176142]
[2025-12-17 06:12:50] 2025-12-17 11:12:16,990 | INFO     | zombie collector waiting for pid 176142
[2025-12-17 06:12:50] 2025-12-17 11:12:16,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:12:50] 2025-12-17 11:12:16,990 | INFO     | collected zombie processes
[2025-12-17 06:12:50] 2025-12-17 11:12:16,990 | INFO     | will attempt to kill all subprocesses of pid=176142
[2025-12-17 06:12:50] 2025-12-17 11:12:20,082 | INFO     | process IDs to be killed: [176142] (in reverse order)
[2025-12-17 06:12:50] 2025-12-17 11:12:20,346 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:12:50] 2025-12-17 11:12:20,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:12:50] 2025-12-17 11:12:20,372 | INFO     | did not find any defunct processes belonging to 176142
[2025-12-17 06:12:50] 2025-12-17 11:12:20,399 | INFO     | did not find any defunct processes belonging to 176142
[2025-12-17 06:12:50] 2025-12-17 11:12:20,399 | INFO     | ready for new job
[2025-12-17 06:12:50] 2025-12-17 11:12:20,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:12:50] 2025-12-17 11:12:20,451 | INFO     | ***************************************
[2025-12-17 06:12:50] 2025-12-17 11:12:20,475 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:12:50] 2025-12-17 11:12:20,475 | INFO     | ***************************************
[2025-12-17 06:12:50] 2025-12-17 11:12:20,476 | INFO     | 
[2025-12-17 06:12:50] 2025-12-17 11:12:20,489 | INFO     | architecture information:
[2025-12-17 06:12:50] 2025-12-17 11:12:20,492 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:12:50] 2025-12-17 11:12:20,547 | INFO     | cat /etc/os-release:
[2025-12-17 06:12:50] NAME="CentOS Linux"
[2025-12-17 06:12:50] VERSION="7 (Core)"
[2025-12-17 06:12:50] ID="centos"
[2025-12-17 06:12:50] ID_LIKE="rhel fedora"
[2025-12-17 06:12:50] VERSION_ID="7"
[2025-12-17 06:12:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:12:50] ANSI_COLOR="0;31"
[2025-12-17 06:12:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:12:50] HOME_URL="https://www.centos.org/"
[2025-12-17 06:12:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:12:50] 
[2025-12-17 06:12:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:12:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:12:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:12:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:12:50] 
[2025-12-17 06:12:50] 2025-12-17 11:12:20,548 | INFO     | ***************************************
[2025-12-17 06:12:50] 2025-12-17 11:12:21,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 06:12:50] 2025-12-17 11:12:21,099 | INFO     | sufficient remaining disk space (74248617984 B)
[2025-12-17 06:12:50] 2025-12-17 11:12:21,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:12:50] 2025-12-17 11:12:21,118 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:12:50] 2025-12-17 11:12:21,118 | INFO     | update_server=False
[2025-12-17 06:12:50] 2025-12-17 11:12:21,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:12:50] 2025-12-17 11:12:21,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:12:50] 2025-12-17 11:12:21,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:12:50] 2025-12-17 11:12:21,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:12:50] 2025-12-17 11:12:21,120 | INFO     | aborting loop
[2025-12-17 06:12:50] 2025-12-17 11:12:21,228 | INFO     | all payload control threads have been joined
[2025-12-17 06:12:50] 2025-12-17 11:12:21,261 | INFO     | all data control threads have been joined
[2025-12-17 06:12:50] 2025-12-17 11:12:21,486 | INFO     | all job control threads have been joined
[2025-12-17 06:12:50] 2025-12-17 11:12:22,125 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,126 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,127 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,232 | INFO     | [payload] control thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,270 | INFO     | [data] control thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,281 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,286 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,492 | INFO     | [job] control thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,601 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,733 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:22,926 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:12:50] 2025-12-17 11:12:23,159 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:23,235 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:23,397 | INFO     | [job] validate thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:23,446 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:23,510 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:26,935 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:12:50] 2025-12-17 11:12:28,366 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:12:50] 2025-12-17 11:12:28,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254908602176)>', '<ExcThread(monitor, started 140254396786432)>']
[2025-12-17 06:12:50] 2025-12-17 11:12:33,956 | INFO     | all workflow threads have been joined
[2025-12-17 06:12:50] 2025-12-17 11:12:33,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:12:50] 2025-12-17 11:12:33,957 | INFO     | traces error code: 0
[2025-12-17 06:12:50] 2025-12-17 11:12:33,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:12:50] 2025-12-17 11:12:49,866 | INFO     | PID=164003 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 06:12:50] 2025-12-17 11:12:49,866 | INFO     | .. there are 45 such processes running
[2025-12-17 06:12:50] 2025-12-17 11:12:49,866 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:12:50] 2025-12-17 11:12:49,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:12:50] 2025-12-17 11:12:49,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:12:50] 2025-12-17 11:12:49,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:12:50] 2025-12-17 11:12:49,892 | INFO     | [monitor] control thread has ended
[2025-12-17 06:12:50] 2025-12-17 11:12:50,185 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:12:50] 2025-12-17 11:12:50,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:12:50] 2025-12-17 11:12:50,190 [wrapper] pilotpid: 164003
[2025-12-17 06:12:50] 2025-12-17 11:12:50,192 [wrapper] Pilot exit status: 0
[2025-12-17 06:12:50] 2025-12-17 11:12:50,201 [wrapper] pandaids: 6931731794
[2025-12-17 06:12:50] 2025-12-17 11:12:50,331 [wrapper] cleanup supervisor_pilot 2220874 164004
[2025-12-17 06:12:50] 2025-12-17 11:12:50,335 [wrapper] Test setup, not cleaning
[2025-12-17 06:12:50] 2025-12-17 11:12:50,351 [wrapper] apfmon messages muted
[2025-12-17 06:12:50] 2025-12-17 11:12:50,353 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:12:50] 2025-12-17 11:12:50,362 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:12:50]  *** Error codes and diagnostics ***
[2025-12-17 06:12:50]     "exeErrorCode": 0,
[2025-12-17 06:12:50]     "exeErrorDiag": "",
[2025-12-17 06:12:50]     "pilotErrorCode": 0,
[2025-12-17 06:12:50]     "pilotErrorDiag": "",
[2025-12-17 06:12:50]  *** Listing of results directory ***
[2025-12-17 06:12:50] total 343444
[2025-12-17 06:12:50] -rwx------. 1 boincer umatlas     36322 Dec 16 17:36 runpilot2-wrapper.sh
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 17:36 queuedata.json
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas       100 Dec 17 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:12:50] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 02:31 run_atlas
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas       105 Dec 17 02:31 job.xml
[2025-12-17 06:12:50] -rw-r--r--. 2 boincer umatlas 193871828 Dec 17 02:31 EVNT.47886829._000602.pool.root.1
[2025-12-17 06:12:50] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 02:31 start_atlas.sh
[2025-12-17 06:12:50] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 02:31 shared
[2025-12-17 06:12:50] -rw-r--r--. 2 boincer umatlas    592411 Dec 17 02:31 input.tar.gz
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas         0 Dec 17 02:31 boinc_lockfile
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas      2537 Dec 17 02:31 pandaJob.out
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas        57 Dec 17 02:31 setup.sh.local
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas    987409 Dec 17 02:32 agis_schedconf.cvmfs.json
[2025-12-17 06:12:50] drwx------. 5 boincer umatlas      4096 Dec 17 02:32 pilot3
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas 149858218 Dec 17 06:10 HITS.47886831._015574.pool.root.1
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas       530 Dec 17 06:10 boinc_task_state.xml
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas      6944 Dec 17 06:11 init_data.xml
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas      1062 Dec 17 06:11 memory_monitor_summary.json
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas   1516240 Dec 17 06:12 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas    418863 Dec 17 06:12 log.47886831._015574.job.log.tgz.1
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas        95 Dec 17 06:12 pilot_heartbeat.json
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas      7798 Dec 17 06:12 heartbeat.json
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 06:12 boinc_mmap_file
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas        28 Dec 17 06:12 wrapper_checkpoint.txt
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas       822 Dec 17 06:12 pilotlog.txt
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas   1603372 Dec 17 06:12 log.47886831._015574.job.log.1
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas       357 Dec 17 06:12 output.list
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas       620 Dec 17 06:12 runtime_log
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas   2037760 Dec 17 06:12 result.tar.gz
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas      9338 Dec 17 06:12 runtime_log.err
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas       658 Dec 17 06:12 RhwNDmxpsp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3FWKDmHQ2lqm.diag
[2025-12-17 06:12:50] -rw-r--r--. 1 boincer umatlas     21404 Dec 17 06:12 stderr.txt
[2025-12-17 06:12:50] HITS file was successfully produced:
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas 149858218 Dec 17 06:10 shared/HITS.pool.root.1
[2025-12-17 06:12:50]  *** Contents of shared directory: ***
[2025-12-17 06:12:50] total 338272
[2025-12-17 06:12:50] -rw-r--r--. 2 boincer umatlas 193871828 Dec 17 02:31 ATLAS.root_0
[2025-12-17 06:12:50] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 02:31 start_atlas.sh
[2025-12-17 06:12:50] -rw-r--r--. 2 boincer umatlas    592411 Dec 17 02:31 input.tar.gz
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas 149858218 Dec 17 06:10 HITS.pool.root.1
[2025-12-17 06:12:50] -rw-------. 1 boincer umatlas   2037760 Dec 17 06:12 result.tar.gz
06:12:51 (156315): run_atlas exited; CPU time 36431.607184
06:12:51 (156315): called boinc_finish(0)

</stderr_txt>
]]>

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