Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:58:19 (1637781): wrapper (7.7.26015): starting
18:58:19 (1637781): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 18:58:19] Arguments: --nthreads 3
[2025-12-17 18:58:19] Threads: 3
[2025-12-17 18:58:19] Checking for CVMFS
[2025-12-17 18:58:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 18:58:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 18:58:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 18:58:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 18:58:20] 2.9.2.0 1157357 2051 72988 154118 1 56 30928323 36864000 0 130560 0 1216364 99.989 76608 13987 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 18:58:20] CVMFS is ok
[2025-12-17 18:58:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 18:58:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 18:58:20] Further information can be found at the LHC@home message board.
[2025-12-17 18:58:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 18:58:20] Checking for apptainer binary...
[2025-12-17 18:58:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 18:58:20] Running /usr/bin/apptainer --version
[2025-12-17 18:58:20] apptainer version 1.4.1-1.1
[2025-12-17 18:58:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 18:58:20] atlasA212
[2025-12-17 18:58:20] apptainer works
[2025-12-17 18:58:20] Set ATHENA_PROC_NUMBER=3
[2025-12-17 18:58:20] Set ATHENA_CORE_NUMBER=3
[2025-12-17 18:58:20] Starting ATLAS job with PandaID=6931598547
[2025-12-17 18:58:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 23:55:02]  *** The last 200 lines of the pilot log: ***
[2025-12-17 23:55:02] 2025-12-17 22:54:20,383 | INFO     | mean y: 2333585.151202749
[2025-12-17 23:55:02] 2025-12-17 22:54:20,383 | INFO     | intersect: -753112546.4027264
[2025-12-17 23:55:02] 2025-12-17 22:54:20,383 | INFO     | chi2: 1.6344732819388557
[2025-12-17 23:55:02] 2025-12-17 22:54:20,384 | INFO     | sum of square deviations: 7253894147.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,384 | INFO     | sum of deviations: 2855505617.499999
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | mean x: 1766003020.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | mean y: 2333422.43006993
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | intersect: -692856146.5130734
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | chi2: 1.6341715316432714
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | current chi2=1.6341715316432714 (change=0.018461623014496085 %)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | right removable region: 285
[2025-12-17 23:55:02] 2025-12-17 22:54:20,385 | INFO     | sum of square deviations: 7253894147.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,386 | INFO     | sum of deviations: -29713656167.500004
[2025-12-17 23:55:02] 2025-12-17 22:54:20,386 | INFO     | mean x: 1766003325.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,386 | INFO     | mean y: 2346427.702797203
[2025-12-17 23:55:02] 2025-12-17 22:54:20,386 | INFO     | intersect: 7236311321.256352
[2025-12-17 23:55:02] 2025-12-17 22:54:20,386 | INFO     | chi2: 0.27938013056867816
[2025-12-17 23:55:02] 2025-12-17 22:54:20,386 | INFO     | current chi2=0.27938013056867816 (change=82.90702370874669 %)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,387 | INFO     | sum of square deviations: 6880054580.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,387 | INFO     | sum of deviations: -15425542323.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,387 | INFO     | mean x: 1766003478.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,387 | INFO     | mean y: 2340592.7580071175
[2025-12-17 23:55:02] 2025-12-17 22:54:20,387 | INFO     | intersect: 3961838453.6680293
[2025-12-17 23:55:02] 2025-12-17 22:54:20,387 | INFO     | chi2: 0.19974609016297992
[2025-12-17 23:55:02] 2025-12-17 22:54:20,388 | INFO     | current chi2=0.19974609016297992 (change=28.503831050405477 %)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,388 | INFO     | sum of square deviations: 6519285025.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | sum of deviations: 214952867.49999928
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | mean x: 1766003630.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | mean y: 2333980.2355072466
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | intersect: -55894421.02869184
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | chi2: 0.08580197137423283
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | current chi2=0.08580197137423283 (change=57.04448016768491 %)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,389 | INFO     | sum of square deviations: 6171352920.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | sum of deviations: 8753010169.999998
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | mean x: 1766003783.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | mean y: 2330272.1254612547
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | intersect: -2502444494.9700933
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | chi2: 0.003661464233393458
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | current chi2=0.003661464233393458 (change=95.7326572166697 %)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,390 | INFO     | sum of square deviations: 5836025702.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | sum of deviations: 7652885661.999999
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | mean x: 1766003935.5
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | mean y: 2330772.187969925
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | intersect: -2313462009.7447824
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | chi2: 0.003429912620691894
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | current chi2=0.003429912620691894 (change=6.324016785136287 %)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | left removable region: 50
[2025-12-17 23:55:02] 2025-12-17 22:54:20,391 | INFO     | sum of square deviations: 4024149870.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | sum of deviations: 3214513279.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | mean x: 1766004515.0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | mean y: 2332532.69787234
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | intersect: -1408361687.8534746
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | chi2: 0.0026817973850517852
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | current memory leak: 0.80 B/s (using 235 data points, chi2=0.00)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,392 | INFO     | could have reported an average CPU frequency of 4428 MHz (13 samples)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | ..............................
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . Timing measurements:
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . get job = 0 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . initial setup = 1 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . payload setup = 3 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . stage-in = 0 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . payload execution = 17725 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . stage-out = 0 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | . log creation = 0 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,393 | INFO     | ..............................
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | 
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | job summary report
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | --------------------------------------------------
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | PanDA job id: 6931598547
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | task id: 47886855
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | errors: (none)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | pilot state: finished 
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | transexitcode: 0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | exeerrorcode: 0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | exeerrordiag: 
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | exitcode: 0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | exitmsg: OK
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | cpuconsumptiontime: 52102 s
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | nevents: 400
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | neventsw: 0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | pid: 1647938
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | pgrp: 1647938
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | corecount: 3
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | event service: False
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | sizes: {0: 2283958, 3: 2284220, 11: 2284248, 17731: 2316725, 17732: 2325729, 17733: 2325785, 17739: 2326107}
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | --------------------------------------------------
[2025-12-17 23:55:02] 2025-12-17 22:54:20,426 | INFO     | 
[2025-12-17 23:55:02] 2025-12-17 22:54:20,427 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | job 6931598547 has completed (purged errors)
[2025-12-17 23:55:02] 2025-12-17 22:54:20,442 | INFO     | overall cleanup function is called
[2025-12-17 23:55:02] 2025-12-17 22:54:21,448 | INFO     | --- collectZombieJob: --- 10, [1647938]
[2025-12-17 23:55:02] 2025-12-17 22:54:21,448 | INFO     | zombie collector waiting for pid 1647938
[2025-12-17 23:55:02] 2025-12-17 22:54:21,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 23:55:02] 2025-12-17 22:54:21,448 | INFO     | collected zombie processes
[2025-12-17 23:55:02] 2025-12-17 22:54:21,448 | INFO     | will attempt to kill all subprocesses of pid=1647938
[2025-12-17 23:55:02] 2025-12-17 22:54:21,509 | INFO     | process IDs to be killed: [1647938] (in reverse order)
[2025-12-17 23:55:02] 2025-12-17 22:54:21,542 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 23:55:02] 2025-12-17 22:54:21,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 23:55:02] 2025-12-17 22:54:21,544 | INFO     | did not find any defunct processes belonging to 1647938
[2025-12-17 23:55:02] 2025-12-17 22:54:21,546 | INFO     | did not find any defunct processes belonging to 1647938
[2025-12-17 23:55:02] 2025-12-17 22:54:21,546 | INFO     | ready for new job
[2025-12-17 23:55:02] 2025-12-17 22:54:21,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 23:55:02] 2025-12-17 22:54:21,547 | INFO     | ***************************************
[2025-12-17 23:55:02] 2025-12-17 22:54:21,547 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 23:55:02] 2025-12-17 22:54:21,547 | INFO     | ***************************************
[2025-12-17 23:55:02] 2025-12-17 22:54:21,547 | INFO     | 
[2025-12-17 23:55:02] 2025-12-17 22:54:21,547 | INFO     | architecture information:
[2025-12-17 23:55:02] 2025-12-17 22:54:21,548 | INFO     | executing command: cat /etc/os-release
[2025-12-17 23:55:02] 2025-12-17 22:54:21,559 | INFO     | cat /etc/os-release:
[2025-12-17 23:55:02] NAME="CentOS Linux"
[2025-12-17 23:55:02] VERSION="7 (Core)"
[2025-12-17 23:55:02] ID="centos"
[2025-12-17 23:55:02] ID_LIKE="rhel fedora"
[2025-12-17 23:55:02] VERSION_ID="7"
[2025-12-17 23:55:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 23:55:02] ANSI_COLOR="0;31"
[2025-12-17 23:55:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 23:55:02] HOME_URL="https://www.centos.org/"
[2025-12-17 23:55:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 23:55:02] 
[2025-12-17 23:55:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 23:55:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 23:55:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 23:55:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 23:55:02] 
[2025-12-17 23:55:02] 2025-12-17 22:54:21,559 | INFO     | ***************************************
[2025-12-17 23:55:02] 2025-12-17 22:54:22,061 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 23:55:02] 2025-12-17 22:54:22,073 | INFO     | sufficient remaining disk space (374279766016 B)
[2025-12-17 23:55:02] 2025-12-17 22:54:22,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 23:55:02] 2025-12-17 22:54:22,073 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 23:55:02] 2025-12-17 22:54:22,073 | INFO     | update_server=False
[2025-12-17 23:55:02] 2025-12-17 22:54:22,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 23:55:02] 2025-12-17 22:54:22,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 23:55:02] 2025-12-17 22:54:22,074 | INFO     | aborting loop
[2025-12-17 23:55:02] 2025-12-17 22:54:22,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 23:55:02] 2025-12-17 22:54:22,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 23:55:02] 2025-12-17 22:54:22,308 | INFO     | all job control threads have been joined
[2025-12-17 23:55:02] 2025-12-17 22:54:22,399 | INFO     | all payload control threads have been joined
[2025-12-17 23:55:02] 2025-12-17 22:54:23,078 | INFO     | [job] retrieve thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,078 | INFO     | [job] job monitor thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,079 | INFO     | [job] queue monitor thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,083 | INFO     | all data control threads have been joined
[2025-12-17 23:55:02] 2025-12-17 22:54:23,121 | INFO     | [payload] validate_post thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,313 | INFO     | [job] control thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,404 | INFO     | [payload] control thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,500 | INFO     | [job] validate thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,555 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,565 | INFO     | [data] copytool_in thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,608 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,840 | INFO     | [payload] failed_post thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:23,982 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:24,079 | INFO     | [data] copytool_out thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:24,088 | INFO     | [data] control thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:24,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 23:55:02] 2025-12-17 22:54:28,684 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:32,313 | INFO     | job.realtimelogging is not enabled
[2025-12-17 23:55:02] 2025-12-17 22:54:33,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 23:55:02] 2025-12-17 22:54:51,761 | INFO     | PID=1641497 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 23:55:02] 2025-12-17 22:54:51,761 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 23:55:02] 2025-12-17 22:54:51,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 23:55:02] 2025-12-17 22:54:51,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 23:55:02] 2025-12-17 22:54:55,723 | INFO     | [monitor] cgroup control has ended
[2025-12-17 23:55:02] 2025-12-17 22:54:56,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458470381376)>', '<ExcThread(monitor, started 140457677928192)>']
[2025-12-17 23:55:02] 2025-12-17 22:54:57,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 23:55:02] 2025-12-17 22:54:57,791 | INFO     | [monitor] control thread has ended
[2025-12-17 23:55:02] 2025-12-17 22:55:01,874 | INFO     | all workflow threads have been joined
[2025-12-17 23:55:02] 2025-12-17 22:55:01,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 23:55:02] 2025-12-17 22:55:01,874 | INFO     | traces error code: 0
[2025-12-17 23:55:02] 2025-12-17 22:55:01,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 23:55:02] 2025-12-17 22:55:01,937 [wrapper] ==== pilot stdout END ====
[2025-12-17 23:55:02] 2025-12-17 22:55:01,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 23:55:02] 2025-12-17 22:55:01,943 [wrapper] pilotpid: 1641497
[2025-12-17 23:55:02] 2025-12-17 22:55:01,946 [wrapper] Pilot exit status: 0
[2025-12-17 23:55:02] 2025-12-17 22:55:01,955 [wrapper] pandaids: 6931598547
[2025-12-17 23:55:02] 2025-12-17 22:55:01,978 [wrapper] cleanup supervisor_pilot 1680118 1641498
[2025-12-17 23:55:02] 2025-12-17 22:55:01,981 [wrapper] Test setup, not cleaning
[2025-12-17 23:55:02] 2025-12-17 22:55:01,984 [wrapper] apfmon messages muted
[2025-12-17 23:55:02] 2025-12-17 22:55:01,987 [wrapper] ==== wrapper stdout END ====
[2025-12-17 23:55:02] 2025-12-17 22:55:01,990 [wrapper] ==== wrapper stderr END ====
[2025-12-17 23:55:02]  *** Error codes and diagnostics ***
[2025-12-17 23:55:02]     "exeErrorCode": 0,
[2025-12-17 23:55:02]     "exeErrorDiag": "",
[2025-12-17 23:55:02]     "pilotErrorCode": 0,
[2025-12-17 23:55:02]     "pilotErrorDiag": "",
[2025-12-17 23:55:02]  *** Listing of results directory ***
[2025-12-17 23:55:02] total 360008
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc    579449 Dec 16 21:04 pilot3.tar.gz
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc      5112 Dec 16 21:08 queuedata.json
[2025-12-17 23:55:02] -rwx------ 1 boinc boinc     36322 Dec 16 21:08 runpilot2-wrapper.sh
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc       100 Dec 17 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 23:55:02] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 18:58 run_atlas
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc       105 Dec 17 18:58 job.xml
[2025-12-17 23:55:02] -rw-r--r-- 2 boinc boinc 195159319 Dec 17 18:58 EVNT.47886852._000007.pool.root.1
[2025-12-17 23:55:02] -rw-r--r-- 2 boinc boinc    592392 Dec 17 18:58 input.tar.gz
[2025-12-17 23:55:02] -rw-r--r-- 2 boinc boinc     15847 Dec 17 18:58 start_atlas.sh
[2025-12-17 23:55:02] drwxrwx--x 2 boinc boinc      4096 Dec 17 18:58 shared
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc         0 Dec 17 18:58 boinc_setup_complete
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc      6450 Dec 17 18:58 init_data.xml
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc         0 Dec 17 18:58 boinc_lockfile
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc      2507 Dec 17 18:58 pandaJob.out
[2025-12-17 23:55:02] -rw------- 1 boinc boinc    987424 Dec 17 18:58 agis_schedconf.cvmfs.json
[2025-12-17 23:55:02] drwx------ 5 boinc boinc      4096 Dec 17 18:58 pilot3
[2025-12-17 23:55:02] -rw------- 1 boinc boinc 163693388 Dec 17 23:53 HITS.47886855._000123.pool.root.1
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc       531 Dec 17 23:53 boinc_task_state.xml
[2025-12-17 23:55:02] -rw------- 1 boinc boinc      1015 Dec 17 23:54 memory_monitor_summary.json
[2025-12-17 23:55:02] -rw------- 1 boinc boinc   1516240 Dec 17 23:54 agis_ddmendpoints.agis.ALL.json
[2025-12-17 23:55:02] -rw------- 1 boinc boinc    446301 Dec 17 23:54 log.47886855._000123.job.log.tgz.1
[2025-12-17 23:55:02] -rw------- 1 boinc boinc        95 Dec 17 23:54 pilot_heartbeat.json
[2025-12-17 23:55:02] -rw------- 1 boinc boinc      7747 Dec 17 23:54 heartbeat.json
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc        28 Dec 17 23:54 wrapper_checkpoint.txt
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc      8192 Dec 17 23:54 boinc_mmap_file
[2025-12-17 23:55:02] -rw------- 1 boinc boinc      4824 Dec 17 23:55 pilotlog.txt
[2025-12-17 23:55:02] -rw------- 1 boinc boinc   2492749 Dec 17 23:55 log.47886855._000123.job.log.1
[2025-12-17 23:55:02] -rw------- 1 boinc boinc       357 Dec 17 23:55 output.list
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc       620 Dec 17 23:55 runtime_log
[2025-12-17 23:55:02] -rw------- 1 boinc boinc   2959360 Dec 17 23:55 result.tar.gz
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc      8913 Dec 17 23:55 runtime_log.err
[2025-12-17 23:55:02] -rw------- 1 boinc boinc       668 Dec 17 23:55 RSKMDmPWqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZDWKDmnr0N2n.diag
[2025-12-17 23:55:02] -rw-r--r-- 1 boinc boinc     20890 Dec 17 23:55 stderr.txt
[2025-12-17 23:55:02] HITS file was successfully produced:
[2025-12-17 23:55:02] -rw------- 1 boinc boinc 163693388 Dec 17 23:53 shared/HITS.pool.root.1
[2025-12-17 23:55:02]  *** Contents of shared directory: ***
[2025-12-17 23:55:02] total 353944
[2025-12-17 23:55:02] -rw-r--r-- 2 boinc boinc 195159319 Dec 17 18:58 ATLAS.root_0
[2025-12-17 23:55:02] -rw-r--r-- 2 boinc boinc    592392 Dec 17 18:58 input.tar.gz
[2025-12-17 23:55:02] -rw-r--r-- 2 boinc boinc     15847 Dec 17 18:58 start_atlas.sh
[2025-12-17 23:55:02] -rw------- 1 boinc boinc 163693388 Dec 17 23:53 HITS.pool.root.1
[2025-12-17 23:55:02] -rw------- 1 boinc boinc   2959360 Dec 17 23:55 result.tar.gz
23:55:03 (1637781): run_atlas exited; CPU time 52190.295516
23:55:03 (1637781): called boinc_finish(0)

</stderr_txt>
]]>

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