Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:15:29 (21979): wrapper (7.7.26015): starting
14:15:29 (21979): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 14:15:29] Arguments: --nthreads 8
[2025-12-17 14:15:29] Threads: 8
[2025-12-17 14:15:29] Checking for CVMFS
[2025-12-17 14:15:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 14:15:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 14:15:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 14:15:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 14:15:32] 2.11.2.0 6904 2343 65976 154112 1 60 13646296 25165825 4702 130560 0 1945444 99.989 414707 1995 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-17 14:15:32] CVMFS is ok
[2025-12-17 14:15:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 14:15:32] Checking for apptainer binary...
[2025-12-17 14:15:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 14:15:32] Running /usr/bin/apptainer --version
[2025-12-17 14:15:32] apptainer version 1.3.2-1.el7
[2025-12-17 14:15:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 14:15:57] cg-vwn474.simple-grid.lan
[2025-12-17 14:15:57] apptainer works
[2025-12-17 14:15:57] Set ATHENA_PROC_NUMBER=8
[2025-12-17 14:15:57] Set ATHENA_CORE_NUMBER=8
[2025-12-17 14:15:57] Starting ATLAS job with PandaID=6931731052
[2025-12-17 14:15:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 18:28:12]  *** The last 200 lines of the pilot log: ***
[2025-12-17 18:28:12] 2025-12-17 17:27:30,048 | INFO     | time since job start (14879s) is within the limit (174528.0s)
[2025-12-17 18:28:12] 2025-12-17 17:27:30,048 | INFO     | 14887s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 18:28:12] 2025-12-17 17:27:32,055 | INFO     | time since job start (14881s) is within the limit (174528.0s)
[2025-12-17 18:28:12] 2025-12-17 17:27:32,079 | INFO     | monitor loop #1083: job 0:6931731052 is in state 'finished'
[2025-12-17 18:28:12] 2025-12-17 17:27:32,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 18:28:12] 2025-12-17 17:27:34,066 | INFO     | time since job start (14883s) is within the limit (174528.0s)
[2025-12-17 18:28:12] 2025-12-17 17:27:34,594 | INFO     | monitor loop #1084: job 0:6931731052 is in state 'finished'
[2025-12-17 18:28:12] 2025-12-17 17:27:34,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,042 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 18:28:12] 2025-12-17 17:27:35,043 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-17 18:28:12] 2025-12-17 17:27:35,045 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6931731052/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,046 | INFO     | extracted standard info from prmon json
[2025-12-17 18:28:12] 2025-12-17 17:27:35,046 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 18:28:12] 2025-12-17 17:27:35,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 18:28:12] 2025-12-17 17:27:35,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 18:28:12] 2025-12-17 17:27:35,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 18:28:12] 2025-12-17 17:27:35,051 | INFO     | fitting pss+swap vs Time
[2025-12-17 18:28:12] 2025-12-17 17:27:35,051 | INFO     | sum of square deviations: 4024149870.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,060 | INFO     | sum of deviations: 88022728977.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,061 | INFO     | mean x: 1765985182.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,061 | INFO     | mean y: 2699998.5276595745
[2025-12-17 18:28:12] 2025-12-17 17:27:35,061 | INFO     | intersect: -38625790508.60746
[2025-12-17 18:28:12] 2025-12-17 17:27:35,061 | INFO     | chi2: 4.885638673561295
[2025-12-17 18:28:12] 2025-12-17 17:27:35,062 | INFO     | sum of square deviations: 3772712597.5
[2025-12-17 18:28:12] 2025-12-17 17:27:35,064 | INFO     | sum of deviations: 109694704819.50003
[2025-12-17 18:28:12] 2025-12-17 17:27:35,064 | INFO     | mean x: 1765985029.5
[2025-12-17 18:28:12] 2025-12-17 17:27:35,064 | INFO     | mean y: 2712960.0304347826
[2025-12-17 18:28:12] 2025-12-17 17:27:35,064 | INFO     | intersect: -51344746333.58955
[2025-12-17 18:28:12] 2025-12-17 17:27:35,064 | INFO     | chi2: 4.07319181614552
[2025-12-17 18:28:12] 2025-12-17 17:27:35,064 | INFO     | current chi2=4.07319181614552 (change=16.629286603046257 %)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,065 | INFO     | right removable region: 229
[2025-12-17 18:28:12] 2025-12-17 17:27:35,065 | INFO     | sum of square deviations: 3772712597.5
[2025-12-17 18:28:12] 2025-12-17 17:27:35,067 | INFO     | sum of deviations: 6156375437.5
[2025-12-17 18:28:12] 2025-12-17 17:27:35,067 | INFO     | mean x: 1765985334.5
[2025-12-17 18:28:12] 2025-12-17 17:27:35,067 | INFO     | mean y: 2749561.1
[2025-12-17 18:28:12] 2025-12-17 17:27:35,067 | INFO     | intersect: -2879014807.462141
[2025-12-17 18:28:12] 2025-12-17 17:27:35,067 | INFO     | chi2: 1.0365782083485664
[2025-12-17 18:28:12] 2025-12-17 17:27:35,067 | INFO     | current chi2=1.0365782083485664 (change=78.78315860814627 %)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,068 | INFO     | sum of square deviations: 3531973200.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,070 | INFO     | sum of deviations: -11304867517.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,070 | INFO     | mean x: 1765985487.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,070 | INFO     | mean y: 2760577.928888889
[2025-12-17 18:28:12] 2025-12-17 17:27:35,070 | INFO     | intersect: 5655190774.024298
[2025-12-17 18:28:12] 2025-12-17 17:27:35,070 | INFO     | chi2: 0.8580856337564148
[2025-12-17 18:28:12] 2025-12-17 17:27:35,071 | INFO     | current chi2=0.8580856337564148 (change=17.219402564570466 %)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,071 | INFO     | left removable region: 20
[2025-12-17 18:28:12] 2025-12-17 17:27:35,079 | INFO     | sum of square deviations: 2830787960.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,081 | INFO     | sum of deviations: 7030279707.000001
[2025-12-17 18:28:12] 2025-12-17 17:27:35,081 | INFO     | mean x: 1765985609.0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,081 | INFO     | mean y: 2778607.215311005
[2025-12-17 18:28:12] 2025-12-17 17:27:35,081 | INFO     | intersect: -4383057762.459915
[2025-12-17 18:28:12] 2025-12-17 17:27:35,082 | INFO     | chi2: 0.001055610926684455
[2025-12-17 18:28:12] 2025-12-17 17:27:35,082 | INFO     | current memory leak: 2.48 B/s (using 209 data points, chi2=0.00)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | ..............................
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . Timing measurements:
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . get job = 0 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . initial setup = 8 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . payload setup = 125 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . stage-in = 0 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . payload execution = 14463 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,083 | INFO     | . stage-out = 5 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,084 | INFO     | . log creation = 1 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,084 | INFO     | ..............................
[2025-12-17 18:28:12] 2025-12-17 17:27:35,376 | INFO     | 
[2025-12-17 18:28:12] 2025-12-17 17:27:35,376 | INFO     | job summary report
[2025-12-17 18:28:12] 2025-12-17 17:27:35,376 | INFO     | --------------------------------------------------
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | PanDA job id: 6931731052
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | task id: 47886831
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | errors: (none)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | pilot state: finished 
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | transexitcode: 0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | exeerrorcode: 0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | exeerrordiag: 
[2025-12-17 18:28:12] 2025-12-17 17:27:35,377 | INFO     | exitcode: 0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | exitmsg: OK
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | cpuconsumptiontime: 55203 s
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | nevents: 400
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | neventsw: 0
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | pid: 32323
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | pgrp: 32323
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | corecount: 8
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | event service: False
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | sizes: {0: 2283712, 1: 2283967, 12: 2283967, 23: 2283995, 34: 2284023, 44: 2284051, 55: 2284207, 66: 2284235, 76: 2284263, 87: 2284319, 91: 2284609, 98: 2284917, 1
[2025-12-17 18:28:12] 2025-12-17 17:27:35,378 | INFO     | --------------------------------------------------
[2025-12-17 18:28:12] 2025-12-17 17:27:35,379 | INFO     | 
[2025-12-17 18:28:12] 2025-12-17 17:27:35,379 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,786 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 18:28:12] 2025-12-17 17:27:35,787 | INFO     | job 6931731052 has completed (purged errors)
[2025-12-17 18:28:12] 2025-12-17 17:27:35,787 | INFO     | overall cleanup function is called
[2025-12-17 18:28:12] 2025-12-17 17:27:36,795 | INFO     | --- collectZombieJob: --- 10, [32323]
[2025-12-17 18:28:12] 2025-12-17 17:27:36,795 | INFO     | zombie collector waiting for pid 32323
[2025-12-17 18:28:12] 2025-12-17 17:27:36,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 18:28:12] 2025-12-17 17:27:36,796 | INFO     | collected zombie processes
[2025-12-17 18:28:12] 2025-12-17 17:27:36,796 | INFO     | will attempt to kill all subprocesses of pid=32323
[2025-12-17 18:28:12] 2025-12-17 17:27:36,897 | INFO     | process IDs to be killed: [32323] (in reverse order)
[2025-12-17 18:28:12] 2025-12-17 17:27:37,924 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 18:28:12] 2025-12-17 17:27:37,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 18:28:12] 2025-12-17 17:27:37,928 | INFO     | did not find any defunct processes belonging to 32323
[2025-12-17 18:28:12] 2025-12-17 17:27:37,933 | INFO     | did not find any defunct processes belonging to 32323
[2025-12-17 18:28:12] 2025-12-17 17:27:37,933 | INFO     | ready for new job
[2025-12-17 18:28:12] 2025-12-17 17:27:37,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 18:28:12] 2025-12-17 17:27:37,935 | INFO     | ***************************************
[2025-12-17 18:28:12] 2025-12-17 17:27:37,936 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 18:28:12] 2025-12-17 17:27:37,936 | INFO     | ***************************************
[2025-12-17 18:28:12] 2025-12-17 17:27:37,936 | INFO     | 
[2025-12-17 18:28:12] 2025-12-17 17:27:37,936 | INFO     | pilot is running in a VM
[2025-12-17 18:28:12] 2025-12-17 17:27:37,936 | INFO     | architecture information:
[2025-12-17 18:28:12] 2025-12-17 17:27:37,953 | INFO     | executing command: cat /etc/os-release
[2025-12-17 18:28:12] 2025-12-17 17:27:38,285 | INFO     | cat /etc/os-release:
[2025-12-17 18:28:12] NAME="CentOS Linux"
[2025-12-17 18:28:12] VERSION="7 (Core)"
[2025-12-17 18:28:12] ID="centos"
[2025-12-17 18:28:12] ID_LIKE="rhel fedora"
[2025-12-17 18:28:12] VERSION_ID="7"
[2025-12-17 18:28:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 18:28:12] ANSI_COLOR="0;31"
[2025-12-17 18:28:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 18:28:12] HOME_URL="https://www.centos.org/"
[2025-12-17 18:28:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 18:28:12] 
[2025-12-17 18:28:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 18:28:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 18:28:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 18:28:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 18:28:12] 
[2025-12-17 18:28:12] 2025-12-17 17:27:38,285 | INFO     | ***************************************
[2025-12-17 18:28:12] 2025-12-17 17:27:38,787 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-17 18:28:12] 2025-12-17 17:27:39,062 | INFO     | sufficient remaining disk space (495914582016 B)
[2025-12-17 18:28:12] 2025-12-17 17:27:39,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 18:28:12] 2025-12-17 17:27:39,062 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 18:28:12] 2025-12-17 17:27:39,062 | INFO     | update_server=False
[2025-12-17 18:28:12] 2025-12-17 17:27:39,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 18:28:12] 2025-12-17 17:27:39,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 18:28:12] 2025-12-17 17:27:39,063 | INFO     | aborting loop
[2025-12-17 18:28:12] 2025-12-17 17:27:39,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 18:28:12] 2025-12-17 17:27:39,426 | INFO     | all payload control threads have been joined
[2025-12-17 18:28:12] 2025-12-17 17:27:39,853 | INFO     | all data control threads have been joined
[2025-12-17 18:28:12] 2025-12-17 17:27:39,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 18:28:12] 2025-12-17 17:27:40,068 | INFO     | [job] retrieve thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,069 | INFO     | [job] job monitor thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,156 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,194 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,204 | INFO     | [data] copytool_in thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 18:28:12] 2025-12-17 17:27:40,432 | INFO     | [payload] control thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,616 | INFO     | all job control threads have been joined
[2025-12-17 18:28:12] 2025-12-17 17:27:40,630 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:40,859 | INFO     | [data] control thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,060 | INFO     | [payload] failed_post thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,074 | INFO     | [data] copytool_out thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,119 | INFO     | [job] validate thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,224 | INFO     | [job] queue monitor thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,423 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,548 | INFO     | [payload] validate_post thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:41,622 | INFO     | [job] control thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:43,899 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 18:28:12] 2025-12-17 17:27:56,241 | INFO     | [monitor] cgroup control has ended
[2025-12-17 18:28:12] 2025-12-17 17:27:57,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969141073728)>', '<ExcThread(monitor, started 139968471095040)>']
[2025-12-17 18:28:12] 2025-12-17 17:28:02,376 | INFO     | all workflow threads have been joined
[2025-12-17 18:28:12] 2025-12-17 17:28:02,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 18:28:12] 2025-12-17 17:28:02,377 | INFO     | traces error code: 0
[2025-12-17 18:28:12] 2025-12-17 17:28:02,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 18:28:12] 2025-12-17 17:28:07,289 | INFO     | PID=25743 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 18:28:12] 2025-12-17 17:28:07,289 | INFO     | .. there are 9 such processes running
[2025-12-17 18:28:12] 2025-12-17 17:28:07,289 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 18:28:12] 2025-12-17 17:28:07,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 18:28:12] 2025-12-17 17:28:07,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 18:28:12] 2025-12-17 17:28:07,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 18:28:12] 2025-12-17 17:28:07,290 | INFO     | [monitor] control thread has ended
[2025-12-17 18:28:12] 2025-12-17 17:28:07,541 [wrapper] ==== pilot stdout END ====
[2025-12-17 18:28:12] 2025-12-17 17:28:07,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 18:28:12] 2025-12-17 17:28:07,546 [wrapper] pilotpid: 25743
[2025-12-17 18:28:12] 2025-12-17 17:28:07,606 [wrapper] Pilot exit status: 0
[2025-12-17 18:28:12] 2025-12-17 17:28:07,993 [wrapper] pandaids: 6931731052
[2025-12-17 18:28:12] 2025-12-17 17:28:08,745 [wrapper] cleanup supervisor_pilot 26307 25744
[2025-12-17 18:28:12] 2025-12-17 17:28:08,841 [wrapper] Test setup, not cleaning
[2025-12-17 18:28:12] 2025-12-17 17:28:08,947 [wrapper] apfmon messages muted
[2025-12-17 18:28:12] 2025-12-17 17:28:09,047 [wrapper] ==== wrapper stdout END ====
[2025-12-17 18:28:12] 2025-12-17 17:28:09,131 [wrapper] ==== wrapper stderr END ====
[2025-12-17 18:28:12]  *** Error codes and diagnostics ***
[2025-12-17 18:28:12]     "exeErrorCode": 0,
[2025-12-17 18:28:12]     "exeErrorDiag": "",
[2025-12-17 18:28:12]     "pilotErrorCode": 0,
[2025-12-17 18:28:12]     "pilotErrorDiag": "",
[2025-12-17 18:28:12]  *** Listing of results directory ***
[2025-12-17 18:28:12] total 339712
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc    579449 Dec 16 21:04 pilot3.tar.gz
[2025-12-17 18:28:12] -rwx------. 1 boinc boinc     36322 Dec 16 21:08 runpilot2-wrapper.sh
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc      5112 Dec 16 21:10 queuedata.json
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc       100 Dec 17 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 18:28:12] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 14:15 run_atlas
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc       105 Dec 17 14:15 job.xml
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc      6392 Dec 17 14:15 init_data.xml
[2025-12-17 18:28:12] -rw-r--r--. 2 boinc boinc 190343191 Dec 17 14:15 EVNT.47886829._000299.pool.root.1
[2025-12-17 18:28:12] -rw-r--r--. 2 boinc boinc     15847 Dec 17 14:15 start_atlas.sh
[2025-12-17 18:28:12] drwxrwx--x. 2 boinc boinc        68 Dec 17 14:15 shared
[2025-12-17 18:28:12] -rw-r--r--. 2 boinc boinc    592419 Dec 17 14:15 input.tar.gz
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc         0 Dec 17 14:15 boinc_lockfile
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc      2537 Dec 17 14:15 pandaJob.out
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc    987423 Dec 17 14:19 agis_schedconf.cvmfs.json
[2025-12-17 18:28:12] drwx------. 5 boinc boinc      4096 Dec 17 14:19 pilot3
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc 148669645 Dec 17 18:24 HITS.47886831._015201.pool.root.1
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc       531 Dec 17 18:24 boinc_task_state.xml
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc      1015 Dec 17 18:25 memory_monitor_summary.json
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc   1516240 Dec 17 18:25 agis_ddmendpoints.agis.ALL.json
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc    475917 Dec 17 18:25 log.47886831._015201.job.log.tgz.1
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc        95 Dec 17 18:27 pilot_heartbeat.json
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc      7771 Dec 17 18:27 heartbeat.json
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc      8192 Dec 17 18:28 boinc_mmap_file
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc        28 Dec 17 18:28 wrapper_checkpoint.txt
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc       820 Dec 17 18:28 pilotlog.txt
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc   1999440 Dec 17 18:28 log.47886831._015201.job.log.1
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc       357 Dec 17 18:28 output.list
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc       620 Dec 17 18:28 runtime_log
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc   2498560 Dec 17 18:28 result.tar.gz
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc      8817 Dec 17 18:28 runtime_log.err
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc       656 Dec 17 18:28 62PODmuWqp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXlaKDmVmOlPo.diag
[2025-12-17 18:28:12] -rw-r--r--. 1 boinc boinc     20995 Dec 17 18:28 stderr.txt
[2025-12-17 18:28:12] HITS file was successfully produced:
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc 148669645 Dec 17 18:24 shared/HITS.pool.root.1
[2025-12-17 18:28:12]  *** Contents of shared directory: ***
[2025-12-17 18:28:12] total 334108
[2025-12-17 18:28:12] -rw-r--r--. 2 boinc boinc 190343191 Dec 17 14:15 ATLAS.root_0
[2025-12-17 18:28:12] -rw-r--r--. 2 boinc boinc     15847 Dec 17 14:15 start_atlas.sh
[2025-12-17 18:28:12] -rw-r--r--. 2 boinc boinc    592419 Dec 17 14:15 input.tar.gz
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc 148669645 Dec 17 18:24 HITS.pool.root.1
[2025-12-17 18:28:12] -rw-------. 1 boinc boinc   2498560 Dec 17 18:28 result.tar.gz
18:28:13 (21979): run_atlas exited; CPU time 55397.601104
18:28:13 (21979): called boinc_finish(0)

</stderr_txt>
]]>

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